RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 PPFIBP1Q86W92 1011 aa7.85□□□□□ -1.15
CDC27-219ENST00000576484 DTX1Q86Y01 620 aa7.85□□□□□ -1.15
CDC27-219ENST00000576484 PLD6Q8N2A8 252 aaKnown RBP7.85□□□□□ -1.15
CDC27-219ENST00000576484 MFSD4AQ8N468 514 aa7.85□□□□□ -1.15
CDC27-219ENST00000576484 HNRNPLLQ8WVV9 542 aaKnown RBP7.85□□□□□ -1.15
CDC27-219ENST00000576484 Q96M66 194 aa7.85□□□□□ -1.15
CDC27-219ENST00000576484 ASPNQ9BXN1 380 aa7.85□□□□□ -1.15
CDC27-219ENST00000576484 MKNK2Q9HBH9 465 aa7.85□□□□□ -1.15
CDC27-219ENST00000576484 ANGEL1Q9UNK9 670 aaKnown RBP7.85□□□□□ -1.15
CDC27-219ENST00000576484 CAPN6Q9Y6Q1 641 aa7.85□□□□□ -1.15
CDC27-219ENST00000576484 GNAT3A8MTJ3 354 aa7.84□□□□□ -1.15
CDC27-219ENST00000576484 LRRN2O75325 713 aa7.84□□□□□ -1.15
CDC27-219ENST00000576484 STK10O94804 968 aaKnown RBP7.84□□□□□ -1.15
CDC27-219ENST00000576484 SPINK2P20155 84 aa7.84□□□□□ -1.15
CDC27-219ENST00000576484 MSMPQ1L6U9 139 aa7.84□□□□□ -1.15
CDC27-219ENST00000576484 NBPF12Q5TAG4 269 aaPredicted RBP7.84□□□□□ -1.15
CDC27-219ENST00000576484 TDRD10Q5VZ19 366 aaKnown RBP7.84□□□□□ -1.15
CDC27-219ENST00000576484 SPACA3Q8IXA5 215 aa7.84□□□□□ -1.15
CDC27-219ENST00000576484 COX4I2Q96KJ9 171 aa7.84□□□□□ -1.15
CDC27-219ENST00000576484 ACTR10Q9NZ32 417 aa7.84□□□□□ -1.15
CDC27-219ENST00000576484 SUCOQ9UBS9 1254 aaKnown RBP7.84□□□□□ -1.15
CDC27-219ENST00000576484 PLAGL2Q9UPG8 496 aa7.84□□□□□ -1.15
CDC27-219ENST00000576484 C9IYK1 514 aa7.83□□□□□ -1.16
CDC27-219ENST00000576484 WNT11O96014 354 aa7.83□□□□□ -1.16
CDC27-219ENST00000576484 KIR3DL1P43629 444 aa7.83□□□□□ -1.16
CDC27-219ENST00000576484 PMS1P54277 932 aaKnown RBP7.83□□□□□ -1.16
CDC27-219ENST00000576484 CHMP4BP1P59074 171 aa7.83□□□□□ -1.16
CDC27-219ENST00000576484 RNF4P78317 190 aa7.83□□□□□ -1.16
CDC27-219ENST00000576484 TNK2Q07912 1038 aa7.83□□□□□ -1.16
CDC27-219ENST00000576484 NKPD1Q17RQ9 610 aa7.83□□□□□ -1.16
CDC27-219ENST00000576484 ANKS3Q6ZW76 656 aa7.83□□□□□ -1.16
CDC27-219ENST00000576484 DTWD2Q8NBA8 298 aa7.83□□□□□ -1.16
CDC27-219ENST00000576484 FBXL18Q96ME1 805 aa7.83□□□□□ -1.16
CDC27-219ENST00000576484 PCDHB10Q9UN67 800 aa7.83□□□□□ -1.16
CDC27-219ENST00000576484 SLC12A7Q9Y666 1083 aa7.83□□□□□ -1.16
CDC27-219ENST00000576484 KLF4O43474 513 aa7.82□□□□□ -1.16
CDC27-219ENST00000576484 NETO1Q8TDF5 533 aa7.82□□□□□ -1.16
CDC27-219ENST00000576484 ARMC5Q96C12 935 aa7.82□□□□□ -1.16
CDC27-219ENST00000576484 MKRN2Q9H000 416 aaKnown RBP7.82□□□□□ -1.16
CDC27-219ENST00000576484 PHAXQ9H814 394 aaKnown RBP7.82□□□□□ -1.16
CDC27-219ENST00000576484 FAM86C1Q9NVL1 165 aa7.82□□□□□ -1.16
CDC27-219ENST00000576484 BSDC1Q9NW68 430 aaPredicted RBP7.82□□□□□ -1.16
CDC27-219ENST00000576484 PPP1R1BQ9UD71 204 aaPredicted RBP7.82□□□□□ -1.16
CDC27-219ENST00000576484 ZNF214Q9UL59 606 aaPredicted RBP7.82□□□□□ -1.16
CDC27-219ENST00000576484 GP2P55259 537 aaKnown RBP7.81□□□□□ -1.16
CDC27-219ENST00000576484 IFI16Q16666 785 aaKnown RBP7.81□□□□□ -1.16
CDC27-219ENST00000576484 KLHL6Q8WZ60 621 aa7.81□□□□□ -1.16
CDC27-219ENST00000576484 DHRS1Q96LJ7 313 aa7.81□□□□□ -1.16
CDC27-219ENST00000576484 DRC1Q96MC2 740 aa7.81□□□□□ -1.16
CDC27-219ENST00000576484 CCDC39Q9UFE4 941 aa7.81□□□□□ -1.16
CDC27-219ENST00000576484 FAM155AB1AL88 458 aaPredicted RBP7.8□□□□□ -1.16
CDC27-219ENST00000576484 B2RBV5 119 aa7.8□□□□□ -1.16
CDC27-219ENST00000576484 SNW1Q13573 536 aaKnown RBP7.8□□□□□ -1.16
CDC27-219ENST00000576484 LARP1BQ659C4 914 aaKnown RBP7.8□□□□□ -1.16
CDC27-219ENST00000576484 TP53INP2Q8IXH6 220 aa7.8□□□□□ -1.16
CDC27-219ENST00000576484 CELF2-AS1Q8N7Q2 184 aa7.8□□□□□ -1.16
CDC27-219ENST00000576484 FLCNQ8NFG4 579 aa7.8□□□□□ -1.16
CDC27-219ENST00000576484 MICAL1Q8TDZ2 1067 aa7.8□□□□□ -1.16
CDC27-219ENST00000576484 ST14Q9Y5Y6 855 aa7.8□□□□□ -1.16
CDC27-219ENST00000576484 SHOXO15266 292 aa7.79□□□□□ -1.16
CDC27-219ENST00000576484 TP53P04637 393 aaPredicted RBP7.79□□□□□ -1.16
CDC27-219ENST00000576484 BNIP3Q12983 259 aa7.79□□□□□ -1.16
CDC27-219ENST00000576484 NBPF9Q3BBW0 867 aa7.79□□□□□ -1.16
CDC27-219ENST00000576484 AXDND1Q5T1B0 1012 aaPredicted RBP7.79□□□□□ -1.16
CDC27-219ENST00000576484 CDKAL1Q5VV42 579 aa7.79□□□□□ -1.16
CDC27-219ENST00000576484 DCAF15Q66K64 600 aa7.79□□□□□ -1.16
CDC27-219ENST00000576484 VHLLQ6RSH7 139 aa7.79□□□□□ -1.16
CDC27-219ENST00000576484 CCDC144CPQ8IYA2 1237 aa7.79□□□□□ -1.16
CDC27-219ENST00000576484 CKAP2LQ8IYA6 745 aa7.79□□□□□ -1.16
CDC27-219ENST00000576484 PIWIL2Q8TC59 973 aaKnown RBP7.79□□□□□ -1.16
CDC27-219ENST00000576484 DNAJC2Q99543 621 aaKnown RBP7.79□□□□□ -1.16
CDC27-219ENST00000576484 KCNH3Q9ULD8 1083 aa7.79□□□□□ -1.16
CDC27-219ENST00000576484 OAS3Q9Y6K5 1087 aaKnown RBP7.79□□□□□ -1.16
CDC27-219ENST00000576484 H3BS24 57 aa7.78□□□□□ -1.16
CDC27-219ENST00000576484 CLCN7P51798 805 aa7.78□□□□□ -1.16
CDC27-219ENST00000576484 SLC7A5Q01650 507 aa7.78□□□□□ -1.16
CDC27-219ENST00000576484 RBL2Q08999 1139 aa7.78□□□□□ -1.16
CDC27-219ENST00000576484 BBS9Q3SYG4 887 aa7.78□□□□□ -1.16
CDC27-219ENST00000576484 GNPTABQ3T906 1256 aa7.78□□□□□ -1.16
CDC27-219ENST00000576484 C6orf15Q6UXA7 325 aaPredicted RBP7.78□□□□□ -1.16
CDC27-219ENST00000576484 VSIG10LQ86VR7 867 aa7.78□□□□□ -1.16
CDC27-219ENST00000576484 SMARCC1Q92922 1105 aaPredicted RBP7.78□□□□□ -1.16
CDC27-219ENST00000576484 HSPA12BQ96MM6 686 aa7.78□□□□□ -1.16
CDC27-219ENST00000576484 R3HCC1Q9Y3T6 440 aaKnown RBP7.78□□□□□ -1.16
CDC27-219ENST00000576484 TMEM265A0A087WTH1 108 aa7.77□□□□□ -1.17
CDC27-219ENST00000576484 SHISA3A0PJX4 238 aa7.77□□□□□ -1.17
CDC27-219ENST00000576484 AUHQ13825 339 aaKnown RBP7.77□□□□□ -1.17
CDC27-219ENST00000576484 RAB33AQ14088 237 aa7.77□□□□□ -1.17
CDC27-219ENST00000576484 KIAA1211LQ6NV74 962 aa7.77□□□□□ -1.17
CDC27-219ENST00000576484 ZNF574Q6ZN55 896 aaPredicted RBP7.77□□□□□ -1.17
CDC27-219ENST00000576484 TMC3Q7Z5M5 1100 aa7.77□□□□□ -1.17
CDC27-219ENST00000576484 UBXN4Q92575 508 aa7.77□□□□□ -1.17
CDC27-219ENST00000576484 HIRIP3Q9BW71 556 aaPredicted RBP7.77□□□□□ -1.17
CDC27-219ENST00000576484 SEMA3GQ9NS98 782 aa7.77□□□□□ -1.17
CDC27-219ENST00000576484 SLC5A6Q9Y289 635 aa7.77□□□□□ -1.17
CDC27-219ENST00000576484 PITPNM2Q9BZ72 1349 aa7.77□□□□□ -1.17
CDC27-219ENST00000576484 CBFA2T2O43439 604 aa7.76□□□□□ -1.17
CDC27-219ENST00000576484 SRFP11831 508 aa7.76□□□□□ -1.17
CDC27-219ENST00000576484 CD96P40200 585 aa7.76□□□□□ -1.17
CDC27-219ENST00000576484 FXNQ16595 210 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms