RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 TFAP4Q01664 338 aa27.89■■■□□ 2.06
SNF8-217ENST00000576353 HOXC10Q9NYD6 342 aa27.89■■■□□ 2.06
SNF8-217ENST00000576353 RBPJLQ9UBG7 517 aa27.89■■■□□ 2.06
SNF8-217ENST00000576353 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.89■■■□□ 2.06
SNF8-217ENST00000576353 MYH8P13535 1937 aa27.88■■■□□ 2.05
SNF8-217ENST00000576353 IGKV6D-41A0A0C4DH26 115 aa27.88■■■□□ 2.05
SNF8-217ENST00000576353 COG2Q14746 738 aa27.88■■■□□ 2.05
SNF8-217ENST00000576353 SPICE1Q8N0Z3 855 aa27.88■■■□□ 2.05
SNF8-217ENST00000576353 RUFY2Q8WXA3 655 aa27.88■■■□□ 2.05
SNF8-217ENST00000576353 COA7Q96BR5 231 aa27.88■■■□□ 2.05
SNF8-217ENST00000576353 CCDC136Q96JN2 1154 aa27.88■■■□□ 2.05
SNF8-217ENST00000576353 TANGO6Q9C0B7 1094 aa27.88■■■□□ 2.05
SNF8-217ENST00000576353 RABGAP1Q9Y3P9 1069 aa27.88■■■□□ 2.05
SNF8-217ENST00000576353 MYPNQ86TC9 1320 aa27.88■■■□□ 2.05
SNF8-217ENST00000576353 WDR46O15213 610 aaKnown RBP27.87■■■□□ 2.05
SNF8-217ENST00000576353 FAM47AQ5JRC9 791 aa27.87■■■□□ 2.05
SNF8-217ENST00000576353 KIAA1755Q5JYT7 1200 aa27.87■■■□□ 2.05
SNF8-217ENST00000576353 PPP4R3BQ5MIZ7 849 aa27.87■■■□□ 2.05
SNF8-217ENST00000576353 LBX2Q6XYB7 198 aa27.87■■■□□ 2.05
SNF8-217ENST00000576353 NBPF11Q86T75 865 aa27.87■■■□□ 2.05
SNF8-217ENST00000576353 RAET1EQ8TD07 263 aa27.87■■■□□ 2.05
SNF8-217ENST00000576353 TXNRD2Q9NNW7 524 aa27.87■■■□□ 2.05
SNF8-217ENST00000576353 MTMR4Q9NYA4 1195 aa27.87■■■□□ 2.05
SNF8-217ENST00000576353 CLIP2Q9UDT6 1046 aa27.87■■■□□ 2.05
SNF8-217ENST00000576353 ORC4O43929 436 aa27.86■■■□□ 2.05
SNF8-217ENST00000576353 FGRP09769 529 aa27.86■■■□□ 2.05
SNF8-217ENST00000576353 SLC9C1Q4G0N8 1177 aa27.86■■■□□ 2.05
SNF8-217ENST00000576353 CEP95Q96GE4 821 aa27.86■■■□□ 2.05
SNF8-217ENST00000576353 PAGR1Q9BTK6 254 aa27.86■■■□□ 2.05
SNF8-217ENST00000576353 SYNPO2Q9UMS6 1093 aa27.86■■■□□ 2.05
SNF8-217ENST00000576353 PLIN4Q96Q06 1357 aa27.86■■■□□ 2.05
SNF8-217ENST00000576353 TSPY2A6NKD2 308 aa27.85■■■□□ 2.05
SNF8-217ENST00000576353 RAD21O60216 631 aa27.85■■■□□ 2.05
SNF8-217ENST00000576353 TTLL1O95922 423 aa27.85■■■□□ 2.05
SNF8-217ENST00000576353 PCP11498 1178 aaKnown RBP27.85■■■□□ 2.05
SNF8-217ENST00000576353 ERVK-9P63128 1117 aa27.85■■■□□ 2.05
SNF8-217ENST00000576353 ERVK-24P63145 666 aa27.85■■■□□ 2.05
SNF8-217ENST00000576353 PRKCZQ05513 592 aa27.85■■■□□ 2.05
SNF8-217ENST00000576353 MKL1Q969V6 931 aa27.85■■■□□ 2.05
SNF8-217ENST00000576353 ARMC5Q96C12 935 aa27.85■■■□□ 2.05
SNF8-217ENST00000576353 DSCC1Q9BVC3 393 aa27.85■■■□□ 2.05
SNF8-217ENST00000576353 INCENPQ9NQS7 918 aa27.85■■■□□ 2.05
SNF8-217ENST00000576353 RAD50Q92878 1312 aa27.85■■■□□ 2.05
SNF8-217ENST00000576353 SPDYE16A6NNV3 312 aaPredicted RBP27.84■■■□□ 2.05
SNF8-217ENST00000576353 RANBP6O60518 1105 aaKnown RBP27.84■■■□□ 2.05
SNF8-217ENST00000576353 CHMLP26374 656 aa27.84■■■□□ 2.05
SNF8-217ENST00000576353 CCAR1Q8IX12 1150 aaKnown RBP27.84■■■□□ 2.05
SNF8-217ENST00000576353 TOMM22Q9NS69 142 aa27.84■■■□□ 2.05
SNF8-217ENST00000576353 CTNNA3Q9UI47 895 aa27.84■■■□□ 2.05
SNF8-217ENST00000576353 ZNF213O14771 459 aa27.83■■■□□ 2.05
SNF8-217ENST00000576353 MAPK4P31152 587 aa27.83■■■□□ 2.05
SNF8-217ENST00000576353 HAND2P61296 217 aa27.83■■■□□ 2.05
SNF8-217ENST00000576353 CCNA1P78396 465 aa27.83■■■□□ 2.05
SNF8-217ENST00000576353 Q3C1V9 767 aa27.83■■■□□ 2.05
SNF8-217ENST00000576353 POTEEQ6S8J3 1075 aa27.83■■■□□ 2.05
SNF8-217ENST00000576353 RNF41Q9H4P4 317 aaPredicted RBP27.83■■■□□ 2.05
SNF8-217ENST00000576353 F5H6K3 240 aa27.82■■■□□ 2.04
SNF8-217ENST00000576353 PEX10O60683 326 aa27.82■■■□□ 2.04
SNF8-217ENST00000576353 FLOT1O75955 427 aa27.82■■■□□ 2.04
SNF8-217ENST00000576353 DSG3P32926 999 aa27.82■■■□□ 2.04
SNF8-217ENST00000576353 FLT3LGP49771 235 aa27.82■■■□□ 2.04
SNF8-217ENST00000576353 KLRC3Q07444 240 aa27.82■■■□□ 2.04
SNF8-217ENST00000576353 MFSD6Q6ZSS7 791 aa27.82■■■□□ 2.04
SNF8-217ENST00000576353 GABRQQ9UN88 632 aa27.82■■■□□ 2.04
SNF8-217ENST00000576353 TACC3Q9Y6A5 838 aa27.82■■■□□ 2.04
SNF8-217ENST00000576353 AKNAD1Q5T1N1 836 aa27.81■■■□□ 2.04
SNF8-217ENST00000576353 MB21D1Q8N884 522 aa27.81■■■□□ 2.04
SNF8-217ENST00000576353 CNMDO75829 334 aa27.8■■■□□ 2.04
SNF8-217ENST00000576353 GRK4P32298 578 aa27.8■■■□□ 2.04
SNF8-217ENST00000576353 IRF5Q13568 498 aa27.8■■■□□ 2.04
SNF8-217ENST00000576353 RRP12Q5JTH9 1297 aaKnown RBP27.8■■■□□ 2.04
SNF8-217ENST00000576353 STAG1Q8WVM7 1258 aa27.8■■■□□ 2.04
SNF8-217ENST00000576353 ZSWIM8A7E2V4 1837 aa27.8■■■□□ 2.04
SNF8-217ENST00000576353 GREB1LQ9C091 1923 aaPredicted RBP27.8■■■□□ 2.04
SNF8-217ENST00000576353 NDUFB10O96000 172 aa27.79■■■□□ 2.04
SNF8-217ENST00000576353 FAM83BQ5T0W9 1011 aa27.79■■■□□ 2.04
SNF8-217ENST00000576353 GMCL1P1Q8NEA9 526 aa27.79■■■□□ 2.04
SNF8-217ENST00000576353 SH3TC2Q8TF17 1288 aa27.79■■■□□ 2.04
SNF8-217ENST00000576353 ZNF333Q96JL9 665 aa27.79■■■□□ 2.04
SNF8-217ENST00000576353 BTBD7Q9P203 1132 aa27.79■■■□□ 2.04
SNF8-217ENST00000576353 NT5C2P49902 561 aa27.78■■■□□ 2.04
SNF8-217ENST00000576353 SOX10P56693 466 aa27.78■■■□□ 2.04
SNF8-217ENST00000576353 IMMTQ16891 758 aaKnown RBP27.78■■■□□ 2.04
SNF8-217ENST00000576353 SLAIN1Q8ND83 568 aa27.78■■■□□ 2.04
SNF8-217ENST00000576353 NBPF3Q9H094 633 aa27.78■■■□□ 2.04
SNF8-217ENST00000576353 PORCNQ9H237 461 aa27.78■■■□□ 2.04
SNF8-217ENST00000576353 IL25Q9H293 177 aa27.78■■■□□ 2.04
SNF8-217ENST00000576353 CWC22Q9HCG8 908 aaKnown RBP27.78■■■□□ 2.04
SNF8-217ENST00000576353 IL17RBQ9NRM6 502 aa27.78■■■□□ 2.04
SNF8-217ENST00000576353 STX8Q9UNK0 236 aa27.78■■■□□ 2.04
SNF8-217ENST00000576353 ADCY3O60266 1144 aa27.77■■■□□ 2.04
SNF8-217ENST00000576353 TBC1D10CQ8IV04 446 aa27.77■■■□□ 2.04
SNF8-217ENST00000576353 LRRC47Q8N1G4 583 aaKnown RBP27.77■■■□□ 2.04
SNF8-217ENST00000576353 PXYLP1Q8TE99 480 aa27.77■■■□□ 2.04
SNF8-217ENST00000576353 TCP11L1Q9NUJ3 509 aa27.77■■■□□ 2.04
SNF8-217ENST00000576353 GJD2Q9UKL4 321 aa27.77■■■□□ 2.04
SNF8-217ENST00000576353 BMP2KLQ5H9B9 411 aa27.76■■■□□ 2.03
SNF8-217ENST00000576353 SAMD1Q6SPF0 538 aaPredicted RBP27.76■■■□□ 2.03
SNF8-217ENST00000576353 GPR142Q7Z601 462 aa27.76■■■□□ 2.03
SNF8-217ENST00000576353 PLEKHH3Q7Z736 793 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms