RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 UBA7P41226 1012 aa9.65□□□□□ -0.86
RPAIN-215ENST00000575112 SCNN1DP51172 638 aa9.65□□□□□ -0.86
RPAIN-215ENST00000575112 MRPS25P82663 173 aaKnown RBP9.65□□□□□ -0.86
RPAIN-215ENST00000575112 SLC39A14Q15043 492 aa9.65□□□□□ -0.86
RPAIN-215ENST00000575112 PTPAQ15257 358 aa9.65□□□□□ -0.86
RPAIN-215ENST00000575112 TXNRD3Q86VQ6 643 aa9.65□□□□□ -0.86
RPAIN-215ENST00000575112 ACRBPQ8NEB7 543 aa9.65□□□□□ -0.86
RPAIN-215ENST00000575112 AK7Q96M32 723 aa9.65□□□□□ -0.86
RPAIN-215ENST00000575112 ABCB6Q9NP58 842 aa9.65□□□□□ -0.86
RPAIN-215ENST00000575112 ARGLU1Q9NWB6 273 aaPredicted RBP9.65□□□□□ -0.86
RPAIN-215ENST00000575112 ZMYM6O95789 1325 aa9.65□□□□□ -0.86
RPAIN-215ENST00000575112 UBR1Q8IWV7 1749 aa9.65□□□□□ -0.86
RPAIN-215ENST00000575112 CMA1P23946 247 aa9.65□□□□□ -0.87
RPAIN-215ENST00000575112 IL6STP40189 918 aaPredicted RBP9.65□□□□□ -0.87
RPAIN-215ENST00000575112 EIF5P55010 431 aaKnown RBP9.65□□□□□ -0.87
RPAIN-215ENST00000575112 PTPROQ16827 1216 aa9.65□□□□□ -0.87
RPAIN-215ENST00000575112 CCDC96Q2M329 555 aa9.65□□□□□ -0.87
RPAIN-215ENST00000575112 FILIP1LQ4L180 1135 aa9.65□□□□□ -0.87
RPAIN-215ENST00000575112 TBC1D9BQ66K14 1250 aa9.65□□□□□ -0.87
RPAIN-215ENST00000575112 MARCH10Q8NA82 808 aaPredicted RBP9.65□□□□□ -0.87
RPAIN-215ENST00000575112 CRNKL1Q9BZJ0 848 aaKnown RBP9.65□□□□□ -0.87
RPAIN-215ENST00000575112 LY9Q9HBG7 655 aa9.65□□□□□ -0.87
RPAIN-215ENST00000575112 C5P01031 1676 aa9.64□□□□□ -0.87
RPAIN-215ENST00000575112 VSNL1P62760 191 aa9.64□□□□□ -0.87
RPAIN-215ENST00000575112 ARID5AQ03989 594 aa9.64□□□□□ -0.87
RPAIN-215ENST00000575112 PTGDRQ13258 359 aa9.64□□□□□ -0.87
RPAIN-215ENST00000575112 POSTNQ15063 836 aa9.64□□□□□ -0.87
RPAIN-215ENST00000575112 GSPT2Q8IYD1 628 aaKnown RBP9.64□□□□□ -0.87
RPAIN-215ENST00000575112 NOA1Q8NC60 698 aaKnown RBP9.64□□□□□ -0.87
RPAIN-215ENST00000575112 TBC1D7Q9P0N9 293 aa9.64□□□□□ -0.87
RPAIN-215ENST00000575112 TUBE1Q9UJT0 475 aa9.64□□□□□ -0.87
RPAIN-215ENST00000575112 FRMPD2Q68DX3 1309 aaPredicted RBP9.64□□□□□ -0.87
RPAIN-215ENST00000575112 DOK7Q18PE1 504 aa9.64□□□□□ -0.87
RPAIN-215ENST00000575112 SOGA3Q5TF21 947 aa9.64□□□□□ -0.87
RPAIN-215ENST00000575112 NCAPH2Q6IBW4 605 aa9.64□□□□□ -0.87
RPAIN-215ENST00000575112 TPTE2Q6XPS3 522 aa9.64□□□□□ -0.87
RPAIN-215ENST00000575112 TMEM87BQ96K49 555 aa9.64□□□□□ -0.87
RPAIN-215ENST00000575112 BPIFA3Q9BQP9 254 aa9.64□□□□□ -0.87
RPAIN-215ENST00000575112 CNNM2Q9H8M5 875 aa9.64□□□□□ -0.87
RPAIN-215ENST00000575112 RTCBQ9Y3I0 505 aaKnown RBP9.64□□□□□ -0.87
RPAIN-215ENST00000575112 FAM196BA6NMK8 535 aa9.64□□□□□ -0.87
RPAIN-215ENST00000575112 KRT2P35908 639 aa9.64□□□□□ -0.87
RPAIN-215ENST00000575112 UBE3CQ15386 1083 aa9.64□□□□□ -0.87
RPAIN-215ENST00000575112 INF2Q27J81 1249 aa9.64□□□□□ -0.87
RPAIN-215ENST00000575112 CDK5RAP3Q96JB5 506 aa9.64□□□□□ -0.87
RPAIN-215ENST00000575112 CAPZA3Q96KX2 299 aa9.64□□□□□ -0.87
RPAIN-215ENST00000575112 MAP3K14Q99558 947 aa9.64□□□□□ -0.87
RPAIN-215ENST00000575112 TMX4Q9H1E5 349 aaPredicted RBP9.64□□□□□ -0.87
RPAIN-215ENST00000575112 HPSEQ9Y251 543 aa9.64□□□□□ -0.87
RPAIN-215ENST00000575112 TACC3Q9Y6A5 838 aa9.64□□□□□ -0.87
RPAIN-215ENST00000575112 UFL1O94874 794 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 PDIA4P13667 645 aaKnown RBP9.63□□□□□ -0.87
RPAIN-215ENST00000575112 TXLNAP40222 546 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 CACNB3P54284 484 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 ANKRD20A12PQ8NF67 263 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 SYMPKQ92797 1274 aaKnown RBP9.63□□□□□ -0.87
RPAIN-215ENST00000575112 EHD4Q9H223 541 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 GPR108Q9NPR9 543 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 MAN1B1Q9UKM7 699 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 RRP15Q9Y3B9 282 aaKnown RBP9.63□□□□□ -0.87
RPAIN-215ENST00000575112 TNS3Q68CZ2 1445 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 LRRIQ3A6PVS8 624 aaPredicted RBP9.63□□□□□ -0.87
RPAIN-215ENST00000575112 WNT7AO00755 349 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 ENC1O14682 589 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 YEATS4O95619 227 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 LDHBP07195 334 aaKnown RBP9.63□□□□□ -0.87
RPAIN-215ENST00000575112 CD44P16070 742 aaKnown RBP9.63□□□□□ -0.87
RPAIN-215ENST00000575112 TNNT3P45378 269 aaPredicted RBP9.63□□□□□ -0.87
RPAIN-215ENST00000575112 RBL2Q08999 1139 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 TBX2Q13207 712 aaPredicted RBP9.63□□□□□ -0.87
RPAIN-215ENST00000575112 DYMQ7RTS9 669 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 PACS2Q86VP3 889 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 MROH5Q6ZUA9 1318 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 MYO5AQ9Y4I1 1855 aaKnown RBP9.63□□□□□ -0.87
RPAIN-215ENST00000575112 A0A087X0B3 334 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 CBFA2T2O43439 604 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 DEXIO95424 95 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 STAT6P42226 847 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 TOB1P50616 345 aaPredicted RBP9.63□□□□□ -0.87
RPAIN-215ENST00000575112 NAPAP54920 295 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 MECOMQ03112 1051 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 ZNF569Q5MCW4 686 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 BEND6Q5SZJ8 279 aaPredicted RBP9.63□□□□□ -0.87
RPAIN-215ENST00000575112 SRLQ86TD4 932 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 DHX37Q8IY37 1157 aaKnown RBP9.63□□□□□ -0.87
RPAIN-215ENST00000575112 GPR161Q8N6U8 529 aaKnown RBP9.63□□□□□ -0.87
RPAIN-215ENST00000575112 CAGE1Q8TC20 777 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 IGDCC4Q8TDY8 1250 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 ZSCAN10Q96SZ4 725 aaPredicted RBP9.63□□□□□ -0.87
RPAIN-215ENST00000575112 HDAC6Q9UBN7 1215 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 GUCA1BQ9UMX6 200 aa9.63□□□□□ -0.87
RPAIN-215ENST00000575112 IKBKBO14920 756 aa9.62□□□□□ -0.87
RPAIN-215ENST00000575112 ARHGAP6O43182 974 aa9.62□□□□□ -0.87
RPAIN-215ENST00000575112 CHMP4BP1P59074 171 aa9.62□□□□□ -0.87
RPAIN-215ENST00000575112 TTC38Q5R3I4 469 aa9.62□□□□□ -0.87
RPAIN-215ENST00000575112 LRRC47Q8N1G4 583 aaKnown RBP9.62□□□□□ -0.87
RPAIN-215ENST00000575112 SRGAP2O75044 1071 aa9.62□□□□□ -0.87
RPAIN-215ENST00000575112 KRT18P05783 430 aaKnown RBP9.62□□□□□ -0.87
RPAIN-215ENST00000575112 TXKP42681 527 aa9.62□□□□□ -0.87
RPAIN-215ENST00000575112 TNNI2P48788 182 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms