RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 HDAC1Q13547 482 aaPredicted RBP13.57□□□□□ -0.24
RPAIN-214ENST00000574003 B4GALNT3Q6L9W6 998 aa13.57□□□□□ -0.24
RPAIN-214ENST00000574003 PLEKHH3Q7Z736 793 aa13.57□□□□□ -0.24
RPAIN-214ENST00000574003 CCAR1Q8IX12 1150 aaKnown RBP13.57□□□□□ -0.24
RPAIN-214ENST00000574003 NUDT12Q9BQG2 462 aa13.57□□□□□ -0.24
RPAIN-214ENST00000574003 LNPKQ9C0E8 428 aa13.57□□□□□ -0.24
RPAIN-214ENST00000574003 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.57□□□□□ -0.24
RPAIN-214ENST00000574003 ARPP21Q9UBL0 812 aaPredicted RBP13.57□□□□□ -0.24
RPAIN-214ENST00000574003 TMX2Q9Y320 296 aa13.57□□□□□ -0.24
RPAIN-214ENST00000574003 TFRCP02786 760 aaKnown RBP13.56□□□□□ -0.24
RPAIN-214ENST00000574003 HMGCRP04035 888 aa13.56□□□□□ -0.24
RPAIN-214ENST00000574003 ZFYP08048 801 aaPredicted RBP13.56□□□□□ -0.24
RPAIN-214ENST00000574003 MAPK4P31152 587 aa13.56□□□□□ -0.24
RPAIN-214ENST00000574003 TDO2P48775 406 aa13.56□□□□□ -0.24
RPAIN-214ENST00000574003 SBK1Q52WX2 424 aa13.56□□□□□ -0.24
RPAIN-214ENST00000574003 ZMYM1Q5SVZ6 1142 aa13.56□□□□□ -0.24
RPAIN-214ENST00000574003 MORN1Q5T089 497 aa13.56□□□□□ -0.24
RPAIN-214ENST00000574003 UBE2Q1Q7Z7E8 422 aa13.56□□□□□ -0.24
RPAIN-214ENST00000574003 DIS3LQ8TF46 1054 aaKnown RBP13.56□□□□□ -0.24
RPAIN-214ENST00000574003 USP6NLQ92738 828 aa13.56□□□□□ -0.24
RPAIN-214ENST00000574003 ATG4CQ96DT6 458 aa13.56□□□□□ -0.24
RPAIN-214ENST00000574003 CCDC17Q96LX7 622 aa13.56□□□□□ -0.24
RPAIN-214ENST00000574003 ARHGEF10LQ9HCE6 1279 aa13.56□□□□□ -0.24
RPAIN-214ENST00000574003 CWC22Q9HCG8 908 aaKnown RBP13.56□□□□□ -0.24
RPAIN-214ENST00000574003 PAK6Q9NQU5 681 aaPredicted RBP13.56□□□□□ -0.24
RPAIN-214ENST00000574003 FBXO28Q9NVF7 368 aa13.56□□□□□ -0.24
RPAIN-214ENST00000574003 FOXP2O15409 715 aa13.55□□□□□ -0.24
RPAIN-214ENST00000574003 FLOT1O75955 427 aa13.55□□□□□ -0.24
RPAIN-214ENST00000574003 FARP2O94887 1054 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-214ENST00000574003 PDE1AP54750 535 aa13.55□□□□□ -0.24
RPAIN-214ENST00000574003 COG2Q14746 738 aa13.55□□□□□ -0.24
RPAIN-214ENST00000574003 VPS53Q5VIR6 699 aa13.55□□□□□ -0.24
RPAIN-214ENST00000574003 IFNL3Q8IZI9 196 aa13.55□□□□□ -0.24
RPAIN-214ENST00000574003 NKX2-3Q8TAU0 364 aa13.55□□□□□ -0.24
RPAIN-214ENST00000574003 GTF3C2Q8WUA4 911 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-214ENST00000574003 GCC1Q96CN9 775 aa13.55□□□□□ -0.24
RPAIN-214ENST00000574003 NUP88Q99567 741 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-214ENST00000574003 MOV10L1Q9BXT6 1211 aaKnown RBP13.55□□□□□ -0.24
RPAIN-214ENST00000574003 VCPKMTQ9H867 229 aa13.55□□□□□ -0.24
RPAIN-214ENST00000574003 INCENPQ9NQS7 918 aa13.55□□□□□ -0.24
RPAIN-214ENST00000574003 FLRT1Q9NZU1 646 aa13.55□□□□□ -0.24
RPAIN-214ENST00000574003 ZBTB47Q9UFB7 747 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-214ENST00000574003 PATL2C9JE40 543 aaKnown RBP13.54□□□□□ -0.24
RPAIN-214ENST00000574003 H0YGN5 161 aa13.54□□□□□ -0.24
RPAIN-214ENST00000574003 PRKAR2AP13861 404 aaKnown RBP13.54□□□□□ -0.24
RPAIN-214ENST00000574003 PTPREP23469 700 aa13.54□□□□□ -0.24
RPAIN-214ENST00000574003 CCND3P30281 292 aaPredicted RBP13.54□□□□□ -0.24
RPAIN-214ENST00000574003 DSG3P32926 999 aa13.54□□□□□ -0.24
RPAIN-214ENST00000574003 IRX6P78412 446 aaPredicted RBP13.54□□□□□ -0.24
RPAIN-214ENST00000574003 CACNB2Q08289 660 aaPredicted RBP13.54□□□□□ -0.24
RPAIN-214ENST00000574003 PLS1Q14651 629 aa13.54□□□□□ -0.24
RPAIN-214ENST00000574003 FAM83BQ5T0W9 1011 aa13.54□□□□□ -0.24
RPAIN-214ENST00000574003 GIMAP6Q6P9H5 292 aa13.54□□□□□ -0.24
RPAIN-214ENST00000574003 LBX2Q6XYB7 198 aa13.54□□□□□ -0.24
RPAIN-214ENST00000574003 NPLOC4Q8TAT6 608 aa13.54□□□□□ -0.24
RPAIN-214ENST00000574003 SOCS4Q8WXH5 440 aa13.54□□□□□ -0.24
RPAIN-214ENST00000574003 DPF3Q92784 378 aa13.54□□□□□ -0.24
RPAIN-214ENST00000574003 CHMP4CQ96CF2 233 aa13.54□□□□□ -0.24
RPAIN-214ENST00000574003 KANSL2Q9H9L4 492 aa13.54□□□□□ -0.24
RPAIN-214ENST00000574003 MKNK2Q9HBH9 465 aa13.54□□□□□ -0.24
RPAIN-214ENST00000574003 PCDH10Q9P2E7 1040 aa13.54□□□□□ -0.24
RPAIN-214ENST00000574003 STAP2Q9UGK3 403 aa13.54□□□□□ -0.24
RPAIN-214ENST00000574003 SUPT16HQ9Y5B9 1047 aaKnown RBP13.54□□□□□ -0.24
RPAIN-214ENST00000574003 TACC3Q9Y6A5 838 aa13.54□□□□□ -0.24
RPAIN-214ENST00000574003 GREB1LQ9C091 1923 aaPredicted RBP13.54□□□□□ -0.24
RPAIN-214ENST00000574003 PARP14Q460N5 1801 aa13.53□□□□□ -0.24
RPAIN-214ENST00000574003 ZKSCAN1P17029 563 aaPredicted RBP13.53□□□□□ -0.24
RPAIN-214ENST00000574003 RGS2P41220 211 aa13.53□□□□□ -0.24
RPAIN-214ENST00000574003 CCNA1P78396 465 aa13.53□□□□□ -0.24
RPAIN-214ENST00000574003 MAP2K5Q13163 448 aa13.53□□□□□ -0.24
RPAIN-214ENST00000574003 FAM47AQ5JRC9 791 aa13.53□□□□□ -0.24
RPAIN-214ENST00000574003 FAM227BQ96M60 508 aa13.53□□□□□ -0.24
RPAIN-214ENST00000574003 CRISPLD2Q9H0B8 497 aa13.53□□□□□ -0.24
RPAIN-214ENST00000574003 HMX1Q9NP08 348 aaPredicted RBP13.53□□□□□ -0.24
RPAIN-214ENST00000574003 HOXC10Q9NYD6 342 aa13.53□□□□□ -0.24
RPAIN-214ENST00000574003 ROBO3Q96MS0 1386 aa13.53□□□□□ -0.24
RPAIN-214ENST00000574003 COL11A1P12107 1806 aaPredicted RBP13.53□□□□□ -0.24
RPAIN-214ENST00000574003 TRIOBPQ9H2D6 2365 aa13.52□□□□□ -0.24
RPAIN-214ENST00000574003 WDR46O15213 610 aaKnown RBP13.52□□□□□ -0.25
RPAIN-214ENST00000574003 XRCC5P13010 732 aaKnown RBP13.52□□□□□ -0.25
RPAIN-214ENST00000574003 GNAT2P19087 354 aa13.52□□□□□ -0.25
RPAIN-214ENST00000574003 ERCC3P19447 782 aa13.52□□□□□ -0.25
RPAIN-214ENST00000574003 CTDSPL2Q05D32 466 aa13.52□□□□□ -0.25
RPAIN-214ENST00000574003 PPARAQ07869 468 aa13.52□□□□□ -0.25
RPAIN-214ENST00000574003 MAP3K21Q5TCX8 1036 aa13.52□□□□□ -0.25
RPAIN-214ENST00000574003 LPAR1Q92633 364 aa13.52□□□□□ -0.25
RPAIN-214ENST00000574003 PAWRQ96IZ0 340 aaKnown RBP13.52□□□□□ -0.25
RPAIN-214ENST00000574003 APBA2Q99767 749 aa13.52□□□□□ -0.25
RPAIN-214ENST00000574003 SPATC1LQ9H0A9 340 aa13.52□□□□□ -0.25
RPAIN-214ENST00000574003 NAPBQ9H115 298 aa13.52□□□□□ -0.25
RPAIN-214ENST00000574003 RPTORQ8N122 1335 aa13.52□□□□□ -0.25
RPAIN-214ENST00000574003 A0A0G2JMZ2 1700 aa13.52□□□□□ -0.25
RPAIN-214ENST00000574003 MYH4Q9Y623 1939 aa13.51□□□□□ -0.25
RPAIN-214ENST00000574003 IGKV6D-41A0A0C4DH26 115 aa13.51□□□□□ -0.25
RPAIN-214ENST00000574003 A0A0D9SFI3 127 aa13.51□□□□□ -0.25
RPAIN-214ENST00000574003 SLC15A5A6NIM6 579 aa13.51□□□□□ -0.25
RPAIN-214ENST00000574003 COBLO75128 1261 aa13.51□□□□□ -0.25
RPAIN-214ENST00000574003 MNX1P50219 401 aaPredicted RBP13.51□□□□□ -0.25
RPAIN-214ENST00000574003 GRB14Q14449 540 aa13.51□□□□□ -0.25
RPAIN-214ENST00000574003 TMEM132BQ14DG7 1078 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms