RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.07■□□□□ 0
TRAPPC1-206ENST00000573989 LSG1Q9H089 658 aaKnown RBP15.07■□□□□ 0
TRAPPC1-206ENST00000573989 VCPKMTQ9H867 229 aa15.07■□□□□ 0
TRAPPC1-206ENST00000573989 INCENPQ9NQS7 918 aa15.07■□□□□ 0
TRAPPC1-206ENST00000573989 TCP11L1Q9NUJ3 509 aa15.07■□□□□ 0
TRAPPC1-206ENST00000573989 CLIP2Q9UDT6 1046 aa15.07■□□□□ 0
TRAPPC1-206ENST00000573989 A0A1W2PRG0 241 aa15.06■□□□□ 0
TRAPPC1-206ENST00000573989 FKTNO75072 461 aa15.06■□□□□ 0
TRAPPC1-206ENST00000573989 CYP21A2P08686 494 aa15.06■□□□□ 0
TRAPPC1-206ENST00000573989 VCAM1P19320 739 aa15.06■□□□□ 0
TRAPPC1-206ENST00000573989 ARHGEF6Q15052 776 aa15.06■□□□□ 0
TRAPPC1-206ENST00000573989 RALYLQ86SE5 291 aaKnown RBP15.06■□□□□ 0
TRAPPC1-206ENST00000573989 CLEC10AQ8IUN9 316 aa15.06■□□□□ 0
TRAPPC1-206ENST00000573989 GTF3C2Q8WUA4 911 aaPredicted RBP15.06■□□□□ 0
TRAPPC1-206ENST00000573989 MKL1Q969V6 931 aa15.06■□□□□ 0
TRAPPC1-206ENST00000573989 NBPF3Q9H094 633 aa15.06■□□□□ 0
TRAPPC1-206ENST00000573989 STX8Q9UNK0 236 aa15.06■□□□□ 0
TRAPPC1-206ENST00000573989 WDR46O15213 610 aaKnown RBP15.05■□□□□ -0
TRAPPC1-206ENST00000573989 KDM4AO75164 1064 aa15.05■□□□□ -0
TRAPPC1-206ENST00000573989 CYP2C8P10632 490 aa15.05■□□□□ -0
TRAPPC1-206ENST00000573989 GCLCP48506 637 aaPredicted RBP15.05■□□□□ -0
TRAPPC1-206ENST00000573989 SP3Q02447 781 aa15.05■□□□□ -0
TRAPPC1-206ENST00000573989 DGKZQ13574 1117 aa15.05■□□□□ -0
TRAPPC1-206ENST00000573989 KIF22Q14807 665 aa15.05■□□□□ -0
TRAPPC1-206ENST00000573989 SIAH1Q8IUQ4 282 aa15.05■□□□□ -0
TRAPPC1-206ENST00000573989 TTC14Q96N46 770 aa15.05■□□□□ -0
TRAPPC1-206ENST00000573989 ASCC2Q9H1I8 757 aaPredicted RBP15.05■□□□□ -0
TRAPPC1-206ENST00000573989 NEDD4P46934 1319 aa15.05■□□□□ -0
TRAPPC1-206ENST00000573989 B4E1Z4 1266 aa15.04■□□□□ -0
TRAPPC1-206ENST00000573989 CATSPERGQ6ZRH7 1159 aa15.04■□□□□ -0
TRAPPC1-206ENST00000573989 NCOA7Q8NI08 942 aa15.04■□□□□ -0
TRAPPC1-206ENST00000573989 ZNF296Q8WUU4 475 aaPredicted RBP15.04■□□□□ -0
TRAPPC1-206ENST00000573989 ERO1AQ96HE7 468 aa15.04■□□□□ -0
TRAPPC1-206ENST00000573989 TANGO6Q9C0B7 1094 aa15.04■□□□□ -0
TRAPPC1-206ENST00000573989 RPAP3Q9H6T3 665 aaPredicted RBP15.04■□□□□ -0
TRAPPC1-206ENST00000573989 TACC3Q9Y6A5 838 aa15.04■□□□□ -0
TRAPPC1-206ENST00000573989 E7EWF7 191 aa15.03■□□□□ -0
TRAPPC1-206ENST00000573989 F5H6K3 240 aa15.03■□□□□ -0
TRAPPC1-206ENST00000573989 EPB41L2O43491 1005 aaKnown RBP15.03■□□□□ -0
TRAPPC1-206ENST00000573989 ZKSCAN1P17029 563 aaPredicted RBP15.03■□□□□ -0
TRAPPC1-206ENST00000573989 KLRC3Q07444 240 aa15.03■□□□□ -0
TRAPPC1-206ENST00000573989 NECTIN1Q15223 517 aa15.03■□□□□ -0
TRAPPC1-206ENST00000573989 C17orf99Q6UX52 265 aa15.03■□□□□ -0
TRAPPC1-206ENST00000573989 SPICE1Q8N0Z3 855 aa15.03■□□□□ -0
TRAPPC1-206ENST00000573989 GMCL1P1Q8NEA9 526 aa15.03■□□□□ -0
TRAPPC1-206ENST00000573989 UBAC1Q9BSL1 405 aa15.03■□□□□ -0
TRAPPC1-206ENST00000573989 R3HDMLQ9H3Y0 253 aa15.03■□□□□ -0
TRAPPC1-206ENST00000573989 IL17RBQ9NRM6 502 aa15.03■□□□□ -0
TRAPPC1-206ENST00000573989 HOXC10Q9NYD6 342 aa15.03■□□□□ -0
TRAPPC1-206ENST00000573989 ERICH2A1L162 156 aa15.02■□□□□ -0
TRAPPC1-206ENST00000573989 SLC27A2O14975 620 aa15.02■□□□□ -0
TRAPPC1-206ENST00000573989 NMT2O60551 498 aa15.02■□□□□ -0
TRAPPC1-206ENST00000573989 TOP1P11387 765 aaKnown RBP15.02■□□□□ -0
TRAPPC1-206ENST00000573989 HERVK_113P62684 666 aa15.02■□□□□ -0
TRAPPC1-206ENST00000573989 COG2Q14746 738 aa15.02■□□□□ -0
TRAPPC1-206ENST00000573989 SART3Q15020 963 aaKnown RBP15.02■□□□□ -0
TRAPPC1-206ENST00000573989 CREB3L3Q68CJ9 461 aa15.02■□□□□ -0
TRAPPC1-206ENST00000573989 DGKHQ86XP1 1220 aa15.02■□□□□ -0
TRAPPC1-206ENST00000573989 P2RX7Q99572 595 aaKnown RBP15.02■□□□□ -0
TRAPPC1-206ENST00000573989 ZSWIM5Q9P217 1185 aa15.02■□□□□ -0
TRAPPC1-206ENST00000573989 CPA4Q9UI42 421 aa15.02■□□□□ -0
TRAPPC1-206ENST00000573989 ADGRA2Q96PE1 1338 aa15.01□□□□□ -0.01
TRAPPC1-206ENST00000573989 FLOT1O75955 427 aa15.01□□□□□ -0.01
TRAPPC1-206ENST00000573989 KRT32Q14532 448 aa15.01□□□□□ -0.01
TRAPPC1-206ENST00000573989 FAM110CQ1W6H9 321 aa15.01□□□□□ -0.01
TRAPPC1-206ENST00000573989 LRRC47Q8N1G4 583 aaKnown RBP15.01□□□□□ -0.01
TRAPPC1-206ENST00000573989 ZSCAN10Q96SZ4 725 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC1-206ENST00000573989 GTF3C3Q9Y5Q9 886 aa15.01□□□□□ -0.01
TRAPPC1-206ENST00000573989 MYPNQ86TC9 1320 aa15□□□□□ -0.01
TRAPPC1-206ENST00000573989 MGAMO43451 1857 aa15□□□□□ -0.01
TRAPPC1-206ENST00000573989 NDUFB10O96000 172 aa15□□□□□ -0.01
TRAPPC1-206ENST00000573989 BCRP11274 1271 aa15□□□□□ -0.01
TRAPPC1-206ENST00000573989 MCCP23508 829 aa15□□□□□ -0.01
TRAPPC1-206ENST00000573989 SLC1A4P43007 532 aa15□□□□□ -0.01
TRAPPC1-206ENST00000573989 NOVP48745 357 aa15□□□□□ -0.01
TRAPPC1-206ENST00000573989 FAM83BQ5T0W9 1011 aa15□□□□□ -0.01
TRAPPC1-206ENST00000573989 SLFN13Q68D06 897 aa15□□□□□ -0.01
TRAPPC1-206ENST00000573989 LBX2Q6XYB7 198 aa15□□□□□ -0.01
TRAPPC1-206ENST00000573989 ANKRD13CQ8N6S4 541 aa15□□□□□ -0.01
TRAPPC1-206ENST00000573989 MB21D1Q8N884 522 aa15□□□□□ -0.01
TRAPPC1-206ENST00000573989 ZKSCAN3Q9BRR0 538 aa15□□□□□ -0.01
TRAPPC1-206ENST00000573989 KAT14Q9H8E8 782 aa15□□□□□ -0.01
TRAPPC1-206ENST00000573989 ISY1Q9ULR0 285 aaKnown RBP15□□□□□ -0.01
TRAPPC1-206ENST00000573989 PARP14Q460N5 1801 aa15□□□□□ -0.01
TRAPPC1-206ENST00000573989 TNKSO95271 1327 aa14.99□□□□□ -0.01
TRAPPC1-206ENST00000573989 GNRH1P01148 92 aa14.99□□□□□ -0.01
TRAPPC1-206ENST00000573989 BMP3P12645 472 aa14.99□□□□□ -0.01
TRAPPC1-206ENST00000573989 DSG3P32926 999 aa14.99□□□□□ -0.01
TRAPPC1-206ENST00000573989 MCM5P33992 734 aa14.99□□□□□ -0.01
TRAPPC1-206ENST00000573989 CCNA1P78396 465 aa14.99□□□□□ -0.01
TRAPPC1-206ENST00000573989 LACTBP83111 547 aaPredicted RBP14.99□□□□□ -0.01
TRAPPC1-206ENST00000573989 KIAA1755Q5JYT7 1200 aa14.99□□□□□ -0.01
TRAPPC1-206ENST00000573989 IFIT1BQ5T764 474 aaKnown RBP14.99□□□□□ -0.01
TRAPPC1-206ENST00000573989 CCAR1Q8IX12 1150 aaKnown RBP14.99□□□□□ -0.01
TRAPPC1-206ENST00000573989 GPRC5AQ8NFJ5 357 aa14.99□□□□□ -0.01
TRAPPC1-206ENST00000573989 GMCL1Q96IK5 515 aa14.99□□□□□ -0.01
TRAPPC1-206ENST00000573989 TMEM47Q9BQJ4 181 aa14.99□□□□□ -0.01
TRAPPC1-206ENST00000573989 MTA3Q9BTC8 594 aa14.99□□□□□ -0.01
TRAPPC1-206ENST00000573989 FEM1BQ9UK73 627 aa14.99□□□□□ -0.01
TRAPPC1-206ENST00000573989 RABGAP1Q9Y3P9 1069 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms