RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 C12orf60Q5U649 245 aa17.22■□□□□ 0.35
TVP23A-208ENST00000573857 ZSCAN25Q6NSZ9 544 aa17.22■□□□□ 0.35
TVP23A-208ENST00000573857 AMOTL1Q8IY63 956 aa17.22■□□□□ 0.35
TVP23A-208ENST00000573857 TANGO6Q9C0B7 1094 aa17.22■□□□□ 0.35
TVP23A-208ENST00000573857 HOXC10Q9NYD6 342 aa17.22■□□□□ 0.35
TVP23A-208ENST00000573857 IVNS1ABPQ9Y6Y0 642 aa17.22■□□□□ 0.35
TVP23A-208ENST00000573857 CYP2D7A0A087X1C5 515 aa17.21■□□□□ 0.35
TVP23A-208ENST00000573857 USP17L12C9JPN9 530 aa17.21■□□□□ 0.35
TVP23A-208ENST00000573857 USP17L21D6R901 530 aa17.21■□□□□ 0.35
TVP23A-208ENST00000573857 SMIM22K7EJ46 135 aa17.21■□□□□ 0.35
TVP23A-208ENST00000573857 CDK8P49336 464 aa17.21■□□□□ 0.35
TVP23A-208ENST00000573857 ICA1Q05084 483 aa17.21■□□□□ 0.35
TVP23A-208ENST00000573857 GRB14Q14449 540 aa17.21■□□□□ 0.35
TVP23A-208ENST00000573857 LHX8Q68G74 356 aa17.21■□□□□ 0.35
TVP23A-208ENST00000573857 C16orf86Q6ZW13 317 aa17.21■□□□□ 0.35
TVP23A-208ENST00000573857 CLEC10AQ8IUN9 316 aa17.21■□□□□ 0.35
TVP23A-208ENST00000573857 SIAH1Q8IUQ4 282 aa17.21■□□□□ 0.35
TVP23A-208ENST00000573857 LPAR1Q92633 364 aa17.21■□□□□ 0.35
TVP23A-208ENST00000573857 DDRGK1Q96HY6 314 aa17.21■□□□□ 0.35
TVP23A-208ENST00000573857 CCDC17Q96LX7 622 aa17.21■□□□□ 0.35
TVP23A-208ENST00000573857 PUS7LQ9H0K6 701 aaKnown RBP17.21■□□□□ 0.35
TVP23A-208ENST00000573857 C11orf49Q9H6J7 331 aa17.21■□□□□ 0.35
TVP23A-208ENST00000573857 ARHGEF10LQ9HCE6 1279 aa17.21■□□□□ 0.35
TVP23A-208ENST00000573857 ECHDC1Q9NTX5 307 aa17.21■□□□□ 0.35
TVP23A-208ENST00000573857 FLRT1Q9NZU1 646 aa17.21■□□□□ 0.35
TVP23A-208ENST00000573857 SLC4A4Q9Y6R1 1079 aa17.21■□□□□ 0.35
TVP23A-208ENST00000573857 HOXC6P09630 235 aa17.2■□□□□ 0.34
TVP23A-208ENST00000573857 MFSD14CQ5VZR4 134 aa17.2■□□□□ 0.34
TVP23A-208ENST00000573857 C7orf61Q8IZ16 206 aa17.2■□□□□ 0.34
TVP23A-208ENST00000573857 DCTPP1Q9H773 170 aa17.2■□□□□ 0.34
TVP23A-208ENST00000573857 SH2D4AQ9H788 454 aa17.2■□□□□ 0.34
TVP23A-208ENST00000573857 TMX2Q9Y320 296 aa17.2■□□□□ 0.34
TVP23A-208ENST00000573857 ALPK3Q96L96 1907 aa17.19■□□□□ 0.34
TVP23A-208ENST00000573857 CTR9Q6PD62 1173 aa17.19■□□□□ 0.34
TVP23A-208ENST00000573857 SPICE1Q8N0Z3 855 aa17.19■□□□□ 0.34
TVP23A-208ENST00000573857 MB21D1Q8N884 522 aa17.19■□□□□ 0.34
TVP23A-208ENST00000573857 MOV10L1Q9BXT6 1211 aaKnown RBP17.19■□□□□ 0.34
TVP23A-208ENST00000573857 SPATC1LQ9H0A9 340 aa17.19■□□□□ 0.34
TVP23A-208ENST00000573857 VCPKMTQ9H867 229 aa17.19■□□□□ 0.34
TVP23A-208ENST00000573857 BAZ2AQ9UIF9 1905 aaKnown RBP17.19■□□□□ 0.34
TVP23A-208ENST00000573857 PFASO15067 1338 aa17.19■□□□□ 0.34
TVP23A-208ENST00000573857 A0A1W2PPC1 479 aa17.18■□□□□ 0.34
TVP23A-208ENST00000573857 DSG3P32926 999 aa17.18■□□□□ 0.34
TVP23A-208ENST00000573857 ATP2B2Q01814 1243 aa17.18■□□□□ 0.34
TVP23A-208ENST00000573857 SHCBP1Q8NEM2 672 aa17.18■□□□□ 0.34
TVP23A-208ENST00000573857 NPLOC4Q8TAT6 608 aa17.18■□□□□ 0.34
TVP23A-208ENST00000573857 GPATCH3Q96I76 525 aa17.18■□□□□ 0.34
TVP23A-208ENST00000573857 STAP2Q9UGK3 403 aa17.18■□□□□ 0.34
TVP23A-208ENST00000573857 MYH7P12883 1935 aa17.17■□□□□ 0.34
TVP23A-208ENST00000573857 A0A0G2JMZ2 1700 aa17.17■□□□□ 0.34
TVP23A-208ENST00000573857 FLOT1O75955 427 aa17.17■□□□□ 0.34
TVP23A-208ENST00000573857 IGHA2P01877 340 aa17.17■□□□□ 0.34
TVP23A-208ENST00000573857 COL6A1P12109 1028 aa17.17■□□□□ 0.34
TVP23A-208ENST00000573857 ADORA2AP29274 412 aa17.17■□□□□ 0.34
TVP23A-208ENST00000573857 TSHZ3Q63HK5 1081 aa17.17■□□□□ 0.34
TVP23A-208ENST00000573857 KBTBD3Q8NAB2 608 aa17.17■□□□□ 0.34
TVP23A-208ENST00000573857 STRBPQ96SI9 672 aaKnown RBP17.17■□□□□ 0.34
TVP23A-208ENST00000573857 ARPP21Q9UBL0 812 aaPredicted RBP17.17■□□□□ 0.34
TVP23A-208ENST00000573857 ZMYND8Q9ULU4 1186 aaPredicted RBP17.17■□□□□ 0.34
TVP23A-208ENST00000573857 RLFQ13129 1914 aa17.16■□□□□ 0.34
TVP23A-208ENST00000573857 WDR46O15213 610 aaKnown RBP17.16■□□□□ 0.34
TVP23A-208ENST00000573857 STRNO43815 780 aa17.16■□□□□ 0.34
TVP23A-208ENST00000573857 EEF2P13639 858 aaKnown RBP17.16■□□□□ 0.34
TVP23A-208ENST00000573857 ERCC3P19447 782 aa17.16■□□□□ 0.34
TVP23A-208ENST00000573857 CYP2C19P33261 490 aa17.16■□□□□ 0.34
TVP23A-208ENST00000573857 ATG4CQ96DT6 458 aa17.16■□□□□ 0.34
TVP23A-208ENST00000573857 GDF15Q99988 308 aa17.16■□□□□ 0.34
TVP23A-208ENST00000573857 KANSL2Q9H9L4 492 aa17.16■□□□□ 0.34
TVP23A-208ENST00000573857 ZNF236Q9UL36 1845 aa17.15■□□□□ 0.34
TVP23A-208ENST00000573857 GSG1L2A8MUP6 293 aa17.15■□□□□ 0.34
TVP23A-208ENST00000573857 PLS1Q14651 629 aa17.15■□□□□ 0.34
TVP23A-208ENST00000573857 SBK1Q52WX2 424 aa17.15■□□□□ 0.34
TVP23A-208ENST00000573857 OLFML2BQ68BL8 750 aa17.15■□□□□ 0.34
TVP23A-208ENST00000573857 DPP9Q86TI2 863 aa17.15■□□□□ 0.34
TVP23A-208ENST00000573857 APPBP2Q92624 585 aa17.15■□□□□ 0.34
TVP23A-208ENST00000573857 OSBP2Q969R2 916 aa17.15■□□□□ 0.34
TVP23A-208ENST00000573857 MROH8Q9H579 483 aa17.15■□□□□ 0.34
TVP23A-208ENST00000573857 DDX20Q9UHI6 824 aaKnown RBP17.15■□□□□ 0.34
TVP23A-208ENST00000573857 MYH8P13535 1937 aa17.15■□□□□ 0.34
TVP23A-208ENST00000573857 MSCO60682 206 aa17.14■□□□□ 0.33
TVP23A-208ENST00000573857 SYN1P17600 705 aa17.14■□□□□ 0.33
TVP23A-208ENST00000573857 GIMAP6Q6P9H5 292 aa17.14■□□□□ 0.33
TVP23A-208ENST00000573857 SAMD1Q6SPF0 538 aaPredicted RBP17.14■□□□□ 0.33
TVP23A-208ENST00000573857 ABRAQ8N0Z2 381 aa17.14■□□□□ 0.33
TVP23A-208ENST00000573857 TRPV1Q8NER1 839 aa17.14■□□□□ 0.33
TVP23A-208ENST00000573857 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.14■□□□□ 0.33
TVP23A-208ENST00000573857 GOPCQ9HD26 462 aa17.14■□□□□ 0.33
TVP23A-208ENST00000573857 ROBO3Q96MS0 1386 aa17.14■□□□□ 0.33
TVP23A-208ENST00000573857 LAMA2P24043 3122 aaKnown RBP17.13■□□□□ 0.33
TVP23A-208ENST00000573857 RNF113AO15541 343 aaKnown RBP17.13■□□□□ 0.33
TVP23A-208ENST00000573857 COBLO75128 1261 aa17.13■□□□□ 0.33
TVP23A-208ENST00000573857 ZFYP08048 801 aaPredicted RBP17.13■□□□□ 0.33
TVP23A-208ENST00000573857 CYBAP13498 195 aa17.13■□□□□ 0.33
TVP23A-208ENST00000573857 CNGA1P29973 690 aa17.13■□□□□ 0.33
TVP23A-208ENST00000573857 BMP8BP34820 402 aa17.13■□□□□ 0.33
TVP23A-208ENST00000573857 TMEM132BQ14DG7 1078 aa17.13■□□□□ 0.33
TVP23A-208ENST00000573857 LRRC26Q2I0M4 334 aa17.13■□□□□ 0.33
TVP23A-208ENST00000573857 NCAPG2Q86XI2 1143 aa17.13■□□□□ 0.33
TVP23A-208ENST00000573857 ADAMTS5Q9UNA0 930 aa17.13■□□□□ 0.33
TVP23A-208ENST00000573857 COL6A3P12111 3177 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms