RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.95□□□□□ -0.5
TRAPPC1-205ENST00000572656 TANGO6Q9C0B7 1094 aa11.95□□□□□ -0.5
TRAPPC1-205ENST00000572656 SPATC1LQ9H0A9 340 aa11.95□□□□□ -0.5
TRAPPC1-205ENST00000572656 DCP1AQ9NPI6 582 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC1-205ENST00000572656 COL6A3P12111 3177 aa11.95□□□□□ -0.5
TRAPPC1-205ENST00000572656 FOCADQ5VW36 1801 aa11.95□□□□□ -0.5
TRAPPC1-205ENST00000572656 TCRBV5S4A2TA0A5A2 114 aa11.94□□□□□ -0.5
TRAPPC1-205ENST00000572656 POTEB2H3BUK9 544 aa11.94□□□□□ -0.5
TRAPPC1-205ENST00000572656 GOLIM4O00461 696 aa11.94□□□□□ -0.5
TRAPPC1-205ENST00000572656 ERCC3P19447 782 aa11.94□□□□□ -0.5
TRAPPC1-205ENST00000572656 DSG3P32926 999 aa11.94□□□□□ -0.5
TRAPPC1-205ENST00000572656 RTP1P59025 263 aa11.94□□□□□ -0.5
TRAPPC1-205ENST00000572656 EVX2Q03828 476 aa11.94□□□□□ -0.5
TRAPPC1-205ENST00000572656 ABRAQ8N0Z2 381 aa11.94□□□□□ -0.5
TRAPPC1-205ENST00000572656 CLASRPQ8N2M8 674 aaKnown RBP11.94□□□□□ -0.5
TRAPPC1-205ENST00000572656 LCORLQ8N3X6 602 aa11.94□□□□□ -0.5
TRAPPC1-205ENST00000572656 SDR42E1Q8WUS8 393 aa11.94□□□□□ -0.5
TRAPPC1-205ENST00000572656 MROH8Q9H579 483 aa11.94□□□□□ -0.5
TRAPPC1-205ENST00000572656 SLC5A4Q9NY91 659 aa11.94□□□□□ -0.5
TRAPPC1-205ENST00000572656 PRKAG2Q9UGJ0 569 aa11.94□□□□□ -0.5
TRAPPC1-205ENST00000572656 SWAP70Q9UH65 585 aa11.94□□□□□ -0.5
TRAPPC1-205ENST00000572656 SEPT4O43236 478 aa11.93□□□□□ -0.5
TRAPPC1-205ENST00000572656 COBLO75128 1261 aa11.93□□□□□ -0.5
TRAPPC1-205ENST00000572656 IFIT2P09913 472 aaKnown RBP11.93□□□□□ -0.5
TRAPPC1-205ENST00000572656 CYP2D6P10635 497 aa11.93□□□□□ -0.5
TRAPPC1-205ENST00000572656 HNRNPUQ00839 825 aaKnown RBP eCLIP11.93□□□□□ -0.5
TRAPPC1-205ENST00000572656 KIAA1755Q5JYT7 1200 aa11.93□□□□□ -0.5
TRAPPC1-205ENST00000572656 GJC2Q5T442 439 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC1-205ENST00000572656 SLC39A5Q6ZMH5 540 aa11.93□□□□□ -0.5
TRAPPC1-205ENST00000572656 SIAH1Q8IUQ4 282 aa11.93□□□□□ -0.5
TRAPPC1-205ENST00000572656 SLC44A5Q8NCS7 719 aa11.93□□□□□ -0.5
TRAPPC1-205ENST00000572656 PANK1Q8TE04 598 aa11.93□□□□□ -0.5
TRAPPC1-205ENST00000572656 KIF1BPQ96EK5 621 aa11.93□□□□□ -0.5
TRAPPC1-205ENST00000572656 DNAJC2Q99543 621 aaKnown RBP11.93□□□□□ -0.5
TRAPPC1-205ENST00000572656 SH2D4AQ9H788 454 aa11.93□□□□□ -0.5
TRAPPC1-205ENST00000572656 ARHGEF10LQ9HCE6 1279 aa11.93□□□□□ -0.5
TRAPPC1-205ENST00000572656 ATP11BQ9Y2G3 1177 aa11.93□□□□□ -0.5
TRAPPC1-205ENST00000572656 TMX2Q9Y320 296 aa11.93□□□□□ -0.5
TRAPPC1-205ENST00000572656 CDK5RAP2Q96SN8 1893 aa11.93□□□□□ -0.5
TRAPPC1-205ENST00000572656 A0A0C4DFX4 3053 aa11.92□□□□□ -0.5
TRAPPC1-205ENST00000572656 KBTBD13C9JR72 458 aa11.92□□□□□ -0.5
TRAPPC1-205ENST00000572656 FLOT1O75955 427 aa11.92□□□□□ -0.5
TRAPPC1-205ENST00000572656 ICA1Q05084 483 aa11.92□□□□□ -0.5
TRAPPC1-205ENST00000572656 PLS1Q14651 629 aa11.92□□□□□ -0.5
TRAPPC1-205ENST00000572656 NCAPG2Q86XI2 1143 aa11.92□□□□□ -0.5
TRAPPC1-205ENST00000572656 RPAP2Q8IXW5 612 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC1-205ENST00000572656 ATG4CQ96DT6 458 aa11.92□□□□□ -0.5
TRAPPC1-205ENST00000572656 DYNLL2Q96FJ2 89 aa11.92□□□□□ -0.5
TRAPPC1-205ENST00000572656 VCPKMTQ9H867 229 aa11.92□□□□□ -0.5
TRAPPC1-205ENST00000572656 ARMT1Q9H993 441 aa11.92□□□□□ -0.5
TRAPPC1-205ENST00000572656 ATP8A2Q9NTI2 1148 aa11.92□□□□□ -0.5
TRAPPC1-205ENST00000572656 APBB1O00213 710 aa11.91□□□□□ -0.5
TRAPPC1-205ENST00000572656 WDR46O15213 610 aaKnown RBP11.91□□□□□ -0.5
TRAPPC1-205ENST00000572656 SLC25A27O95847 323 aa11.91□□□□□ -0.5
TRAPPC1-205ENST00000572656 AKR1B1P15121 316 aa11.91□□□□□ -0.5
TRAPPC1-205ENST00000572656 SNX17Q15036 470 aa11.91□□□□□ -0.5
TRAPPC1-205ENST00000572656 PRAMEF19Q5SWL8 479 aa11.91□□□□□ -0.5
TRAPPC1-205ENST00000572656 ANO1Q5XXA6 986 aa11.91□□□□□ -0.5
TRAPPC1-205ENST00000572656 SPICE1Q8N0Z3 855 aa11.91□□□□□ -0.5
TRAPPC1-205ENST00000572656 MAML3Q96JK9 1138 aa11.91□□□□□ -0.5
TRAPPC1-205ENST00000572656 CCDC17Q96LX7 622 aa11.91□□□□□ -0.5
TRAPPC1-205ENST00000572656 GUCD1Q96NT3 240 aa11.91□□□□□ -0.5
TRAPPC1-205ENST00000572656 PAG1Q9NWQ8 432 aa11.91□□□□□ -0.5
TRAPPC1-205ENST00000572656 PRKAB2O43741 272 aa11.9□□□□□ -0.5
TRAPPC1-205ENST00000572656 RAB11FIP3O75154 756 aa11.9□□□□□ -0.5
TRAPPC1-205ENST00000572656 HMMRO75330 724 aa11.9□□□□□ -0.5
TRAPPC1-205ENST00000572656 MBD4O95243 580 aa11.9□□□□□ -0.5
TRAPPC1-205ENST00000572656 MS4A1P11836 297 aa11.9□□□□□ -0.5
TRAPPC1-205ENST00000572656 FCER1AP12319 257 aa11.9□□□□□ -0.5
TRAPPC1-205ENST00000572656 ADD2P35612 726 aa11.9□□□□□ -0.5
TRAPPC1-205ENST00000572656 ADCYAP1R1P41586 468 aa11.9□□□□□ -0.5
TRAPPC1-205ENST00000572656 CDK8P49336 464 aa11.9□□□□□ -0.5
TRAPPC1-205ENST00000572656 TMEM132BQ14DG7 1078 aa11.9□□□□□ -0.5
TRAPPC1-205ENST00000572656 LRRC41Q15345 812 aa11.9□□□□□ -0.5
TRAPPC1-205ENST00000572656 C12orf60Q5U649 245 aa11.9□□□□□ -0.5
TRAPPC1-205ENST00000572656 C1orf53Q5VUE5 145 aa11.9□□□□□ -0.5
TRAPPC1-205ENST00000572656 CLEC10AQ8IUN9 316 aa11.9□□□□□ -0.5
TRAPPC1-205ENST00000572656 AMOTL1Q8IY63 956 aa11.9□□□□□ -0.5
TRAPPC1-205ENST00000572656 NRBP1Q9UHY1 535 aa11.9□□□□□ -0.5
TRAPPC1-205ENST00000572656 ADAMTS5Q9UNA0 930 aa11.9□□□□□ -0.5
TRAPPC1-205ENST00000572656 MYCNP04198 464 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC1-205ENST00000572656 ATP5JP18859 108 aa11.89□□□□□ -0.51
TRAPPC1-205ENST00000572656 SHHQ15465 462 aa11.89□□□□□ -0.51
TRAPPC1-205ENST00000572656 TRIM60Q495X7 471 aa11.89□□□□□ -0.51
TRAPPC1-205ENST00000572656 SLFNL1Q499Z3 407 aa11.89□□□□□ -0.51
TRAPPC1-205ENST00000572656 FAM47AQ5JRC9 791 aa11.89□□□□□ -0.51
TRAPPC1-205ENST00000572656 ZNF697Q5TEC3 545 aa11.89□□□□□ -0.51
TRAPPC1-205ENST00000572656 SAMD1Q6SPF0 538 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC1-205ENST00000572656 C16orf86Q6ZW13 317 aa11.89□□□□□ -0.51
TRAPPC1-205ENST00000572656 SIRT2Q8IXJ6 389 aa11.89□□□□□ -0.51
TRAPPC1-205ENST00000572656 BADQ92934 168 aa11.89□□□□□ -0.51
TRAPPC1-205ENST00000572656 FAM161BQ96MY7 647 aa11.89□□□□□ -0.51
TRAPPC1-205ENST00000572656 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.89□□□□□ -0.51
TRAPPC1-205ENST00000572656 BOLA2Q9H3K6 86 aa11.89□□□□□ -0.51
TRAPPC1-205ENST00000572656 KANSL2Q9H9L4 492 aa11.89□□□□□ -0.51
TRAPPC1-205ENST00000572656 PRDM5Q9NQX1 630 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC1-205ENST00000572656 MYH1P12882 1939 aa11.89□□□□□ -0.51
TRAPPC1-205ENST00000572656 MYO5AQ9Y4I1 1855 aaKnown RBP11.89□□□□□ -0.51
TRAPPC1-205ENST00000572656 ZNF236Q9UL36 1845 aa11.88□□□□□ -0.51
TRAPPC1-205ENST00000572656 CYP2D7A0A087X1C5 515 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms