RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 RAI14Q9P0K7 980 aa12.46□□□□□ -0.41
CHMP6-203ENST00000572525 PRRC2BQ5JSZ5 2229 aaKnown RBP12.45□□□□□ -0.42
CHMP6-203ENST00000572525 ZNF521Q96K83 1311 aa12.45□□□□□ -0.42
CHMP6-203ENST00000572525 UQCRFS1P1P0C7P4 283 aa12.45□□□□□ -0.42
CHMP6-203ENST00000572525 MTX1Q13505 466 aa12.45□□□□□ -0.42
CHMP6-203ENST00000572525 ALDH1L2Q3SY69 923 aa12.45□□□□□ -0.42
CHMP6-203ENST00000572525 NAA16Q6N069 864 aaPredicted RBP12.45□□□□□ -0.42
CHMP6-203ENST00000572525 RNF180Q86T96 592 aa12.45□□□□□ -0.42
CHMP6-203ENST00000572525 MB21D1Q8N884 522 aa12.45□□□□□ -0.42
CHMP6-203ENST00000572525 TSEN34Q9BSV6 310 aaKnown RBP12.45□□□□□ -0.42
CHMP6-203ENST00000572525 MROH8Q9H579 483 aa12.45□□□□□ -0.42
CHMP6-203ENST00000572525 PA2G4Q9UQ80 394 aaKnown RBP12.45□□□□□ -0.42
CHMP6-203ENST00000572525 MCM3APO60318 1980 aa12.45□□□□□ -0.42
CHMP6-203ENST00000572525 GH2P01242 217 aa12.44□□□□□ -0.42
CHMP6-203ENST00000572525 SHROOM1Q2M3G4 852 aaPredicted RBP12.44□□□□□ -0.42
CHMP6-203ENST00000572525 FAM47AQ5JRC9 791 aa12.44□□□□□ -0.42
CHMP6-203ENST00000572525 TMED8Q6PL24 325 aaPredicted RBP12.44□□□□□ -0.42
CHMP6-203ENST00000572525 IL27Q8NEV9 243 aa12.44□□□□□ -0.42
CHMP6-203ENST00000572525 TGFBRAP1Q8WUH2 860 aa12.44□□□□□ -0.42
CHMP6-203ENST00000572525 SSH1Q8WYL5 1049 aa12.44□□□□□ -0.42
CHMP6-203ENST00000572525 MOV10L1Q9BXT6 1211 aaKnown RBP12.44□□□□□ -0.42
CHMP6-203ENST00000572525 SPATC1LQ9H0A9 340 aa12.44□□□□□ -0.42
CHMP6-203ENST00000572525 AATFQ9NY61 560 aaKnown RBP eCLIP12.44□□□□□ -0.42
CHMP6-203ENST00000572525 HOXC10Q9NYD6 342 aa12.44□□□□□ -0.42
CHMP6-203ENST00000572525 CXXC1Q9P0U4 656 aaPredicted RBP12.44□□□□□ -0.42
CHMP6-203ENST00000572525 LRP2BPQ9P2M1 347 aa12.44□□□□□ -0.42
CHMP6-203ENST00000572525 PALD1Q9ULE6 856 aa12.44□□□□□ -0.42
CHMP6-203ENST00000572525 NDUFB9Q9Y6M9 179 aa12.44□□□□□ -0.42
CHMP6-203ENST00000572525 MROH7Q68CQ1 1323 aa12.43□□□□□ -0.42
CHMP6-203ENST00000572525 A0A1W2PQ45 241 aaPredicted RBP12.43□□□□□ -0.42
CHMP6-203ENST00000572525 A0A1W2PQY0 241 aa12.43□□□□□ -0.42
CHMP6-203ENST00000572525 TIMP1P01033 207 aa12.43□□□□□ -0.42
CHMP6-203ENST00000572525 RARBP10826 455 aa12.43□□□□□ -0.42
CHMP6-203ENST00000572525 MCAMP43121 646 aa12.43□□□□□ -0.42
CHMP6-203ENST00000572525 TFCP2Q12800 502 aa12.43□□□□□ -0.42
CHMP6-203ENST00000572525 PPIGQ13427 754 aaKnown RBP eCLIP12.43□□□□□ -0.427e-8■■■□□ 17.4
CHMP6-203ENST00000572525 AAK1Q2M2I8 961 aa12.43□□□□□ -0.42
CHMP6-203ENST00000572525 MFSD5Q6N075 450 aa12.43□□□□□ -0.42
CHMP6-203ENST00000572525 PI16Q6UXB8 463 aa12.43□□□□□ -0.42
CHMP6-203ENST00000572525 TBC1D9Q6ZT07 1266 aa12.43□□□□□ -0.42
CHMP6-203ENST00000572525 MAPKAPK5Q8IW41 473 aa12.43□□□□□ -0.42
CHMP6-203ENST00000572525 SLC44A5Q8NCS7 719 aa12.43□□□□□ -0.42
CHMP6-203ENST00000572525 FERMT2Q96AC1 680 aa12.43□□□□□ -0.42
CHMP6-203ENST00000572525 MAML3Q96JK9 1138 aa12.43□□□□□ -0.42
CHMP6-203ENST00000572525 PBX4Q9BYU1 374 aa12.43□□□□□ -0.42
CHMP6-203ENST00000572525 TSPYL2Q9H2G4 693 aaPredicted RBP12.43□□□□□ -0.42
CHMP6-203ENST00000572525 XPNPEP3Q9NQH7 507 aa12.43□□□□□ -0.42
CHMP6-203ENST00000572525 TMEM39AQ9NV64 488 aa12.43□□□□□ -0.42
CHMP6-203ENST00000572525 SERPINB13Q9UIV8 391 aa12.43□□□□□ -0.42
CHMP6-203ENST00000572525 TBX21Q9UL17 535 aa12.43□□□□□ -0.42
CHMP6-203ENST00000572525 DIS3Q9Y2L1 958 aaKnown RBP12.43□□□□□ -0.42
CHMP6-203ENST00000572525 HCN4Q9Y3Q4 1203 aa12.43□□□□□ -0.42
CHMP6-203ENST00000572525 LRRC37A2A6NM11 1700 aa12.42□□□□□ -0.42
CHMP6-203ENST00000572525 DCDC2CA8MYV0 355 aa12.42□□□□□ -0.42
CHMP6-203ENST00000572525 COBLO75128 1261 aa12.42□□□□□ -0.42
CHMP6-203ENST00000572525 FAAP100Q0VG06 881 aa12.42□□□□□ -0.42
CHMP6-203ENST00000572525 COG2Q14746 738 aa12.42□□□□□ -0.42
CHMP6-203ENST00000572525 RAB30Q15771 203 aa12.42□□□□□ -0.42
CHMP6-203ENST00000572525 ANO1Q5XXA6 986 aa12.42□□□□□ -0.42
CHMP6-203ENST00000572525 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.42□□□□□ -0.423e-7■■■■□ 20.1
CHMP6-203ENST00000572525 SALL2Q9Y467 1007 aaPredicted RBP12.42□□□□□ -0.42
CHMP6-203ENST00000572525 MOXD2PA6NHM9 499 aa12.41□□□□□ -0.42
CHMP6-203ENST00000572525 BMP1P13497 986 aa12.41□□□□□ -0.42
CHMP6-203ENST00000572525 ERCC3P19447 782 aa12.41□□□□□ -0.42
CHMP6-203ENST00000572525 GORABQ5T7V8 394 aa12.41□□□□□ -0.42
CHMP6-203ENST00000572525 PSRC1Q6PGN9 363 aaPredicted RBP12.41□□□□□ -0.42
CHMP6-203ENST00000572525 NUP133Q8WUM0 1156 aa12.41□□□□□ -0.42
CHMP6-203ENST00000572525 ZNF512BQ96KM6 892 aaPredicted RBP12.41□□□□□ -0.42
CHMP6-203ENST00000572525 PRDM12Q9H4Q4 367 aa12.41□□□□□ -0.42
CHMP6-203ENST00000572525 RPAP3Q9H6T3 665 aaPredicted RBP12.41□□□□□ -0.42
CHMP6-203ENST00000572525 MRS2Q9HD23 443 aa12.41□□□□□ -0.42
CHMP6-203ENST00000572525 CABP5Q9NP86 173 aa12.41□□□□□ -0.42
CHMP6-203ENST00000572525 ELP1O95163 1332 aa12.4□□□□□ -0.42
CHMP6-203ENST00000572525 PQBP1O60828 265 aaKnown RBP12.4□□□□□ -0.42
CHMP6-203ENST00000572525 ADAMTS4O75173 837 aa12.4□□□□□ -0.42
CHMP6-203ENST00000572525 AKR1A1P14550 325 aa12.4□□□□□ -0.42
CHMP6-203ENST00000572525 ADGRE1Q14246 886 aa12.4□□□□□ -0.42
CHMP6-203ENST00000572525 ZYXQ15942 572 aaKnown RBP12.4□□□□□ -0.42
CHMP6-203ENST00000572525 ABCB5Q2M3G0 1257 aa12.4□□□□□ -0.42
CHMP6-203ENST00000572525 CERKLQ49MI3 558 aaPredicted RBP12.4□□□□□ -0.42
CHMP6-203ENST00000572525 TMEM240Q5SV17 173 aa12.4□□□□□ -0.42
CHMP6-203ENST00000572525 TTC6Q86TZ1 520 aa12.4□□□□□ -0.42
CHMP6-203ENST00000572525 NEUROD6Q96NK8 337 aa12.4□□□□□ -0.42
CHMP6-203ENST00000572525 GPR108Q9NPR9 543 aa12.4□□□□□ -0.42
CHMP6-203ENST00000572525 SLC25A27O95847 323 aa12.39□□□□□ -0.43
CHMP6-203ENST00000572525 FCER1AP12319 257 aa12.39□□□□□ -0.43
CHMP6-203ENST00000572525 ADGRA1Q86SQ6 560 aa12.39□□□□□ -0.43
CHMP6-203ENST00000572525 MSL3Q8N5Y2 521 aaKnown RBP12.39□□□□□ -0.43
CHMP6-203ENST00000572525 ACER1Q8TDN7 264 aa12.39□□□□□ -0.43
CHMP6-203ENST00000572525 TINF2Q9BSI4 451 aa12.39□□□□□ -0.43
CHMP6-203ENST00000572525 MTIF3Q9H2K0 278 aaKnown RBP12.39□□□□□ -0.43
CHMP6-203ENST00000572525 STARD7Q9NQZ5 370 aa12.39□□□□□ -0.43
CHMP6-203ENST00000572525 MSRAQ9UJ68 235 aa12.39□□□□□ -0.43
CHMP6-203ENST00000572525 E9PSI1 815 aa12.38□□□□□ -0.43
CHMP6-203ENST00000572525 SRGAP3O43295 1099 aa12.38□□□□□ -0.43
CHMP6-203ENST00000572525 MYCNP04198 464 aaPredicted RBP12.38□□□□□ -0.43
CHMP6-203ENST00000572525 GNAI3P08754 354 aa12.38□□□□□ -0.43
CHMP6-203ENST00000572525 POU3F3P20264 500 aaPredicted RBP12.38□□□□□ -0.43
CHMP6-203ENST00000572525 CST5P28325 142 aaPredicted RBP12.38□□□□□ -0.43
CHMP6-203ENST00000572525 DSG3P32926 999 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms