RNA–Protein interactions for RNA: ENST00000572152.5

ABR-216, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 637 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-216ENST00000572152 GJA8P48165 433 aa11.95□□□□□ -0.5
ABR-216ENST00000572152 CCNA1P78396 465 aa11.95□□□□□ -0.5
ABR-216ENST00000572152 PRPF38BQ5VTL8 546 aaKnown RBP11.95□□□□□ -0.5
ABR-216ENST00000572152 IFNL3Q8IZI9 196 aa11.95□□□□□ -0.5
ABR-216ENST00000572152 STK11IPQ8N1F8 1099 aa11.95□□□□□ -0.5
ABR-216ENST00000572152 SOCS4Q8WXH5 440 aa11.95□□□□□ -0.5
ABR-216ENST00000572152 EVI5LQ96CN4 794 aa11.95□□□□□ -0.5
ABR-216ENST00000572152 NUDT12Q9BQG2 462 aa11.95□□□□□ -0.5
ABR-216ENST00000572152 TANGO6Q9C0B7 1094 aa11.95□□□□□ -0.5
ABR-216ENST00000572152 LNPKQ9C0E8 428 aa11.95□□□□□ -0.5
ABR-216ENST00000572152 VCPKMTQ9H867 229 aa11.95□□□□□ -0.5
ABR-216ENST00000572152 MKNK2Q9HBH9 465 aa11.95□□□□□ -0.5
ABR-216ENST00000572152 SUPT16HQ9Y5B9 1047 aaKnown RBP11.95□□□□□ -0.5
ABR-216ENST00000572152 ROBO3Q96MS0 1386 aa11.94□□□□□ -0.5
ABR-216ENST00000572152 IGHDP01880 384 aa11.94□□□□□ -0.5
ABR-216ENST00000572152 HMGCRP04035 888 aa11.94□□□□□ -0.5
ABR-216ENST00000572152 ATP2B2Q01814 1243 aa11.94□□□□□ -0.5
ABR-216ENST00000572152 COG2Q14746 738 aa11.94□□□□□ -0.5
ABR-216ENST00000572152 MORN1Q5T089 497 aa11.94□□□□□ -0.5
ABR-216ENST00000572152 B4GALNT3Q6L9W6 998 aa11.94□□□□□ -0.5
ABR-216ENST00000572152 GPR142Q7Z601 462 aa11.94□□□□□ -0.5
ABR-216ENST00000572152 PLEKHH3Q7Z736 793 aa11.94□□□□□ -0.5
ABR-216ENST00000572152 SPICE1Q8N0Z3 855 aa11.94□□□□□ -0.5
ABR-216ENST00000572152 U2AF1L4Q8WU68 220 aaKnown RBP11.94□□□□□ -0.5
ABR-216ENST00000572152 USP6NLQ92738 828 aa11.94□□□□□ -0.5
ABR-216ENST00000572152 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.94□□□□□ -0.5
ABR-216ENST00000572152 NACAP1Q9BZK3 213 aa11.94□□□□□ -0.5
ABR-216ENST00000572152 HOXC10Q9NYD6 342 aa11.94□□□□□ -0.5
ABR-216ENST00000572152 BTBD7Q9P203 1132 aa11.94□□□□□ -0.5
ABR-216ENST00000572152 PDE4DIPQ5VU43 2346 aa11.94□□□□□ -0.5
ABR-216ENST00000572152 WDR46O15213 610 aaKnown RBP11.93□□□□□ -0.5
ABR-216ENST00000572152 SGPL1O95470 568 aa11.93□□□□□ -0.5
ABR-216ENST00000572152 XRCC5P13010 732 aaKnown RBP11.93□□□□□ -0.5
ABR-216ENST00000572152 TRIM32Q13049 653 aa11.93□□□□□ -0.5
ABR-216ENST00000572152 CCDC129Q6ZRS4 1044 aa11.93□□□□□ -0.5
ABR-216ENST00000572152 TRIB2Q92519 343 aa11.93□□□□□ -0.5
ABR-216ENST00000572152 DEFB118Q96PH6 123 aa11.93□□□□□ -0.5
ABR-216ENST00000572152 NAPBQ9H115 298 aa11.93□□□□□ -0.5
ABR-216ENST00000572152 CWC22Q9HCG8 908 aaKnown RBP11.93□□□□□ -0.5
ABR-216ENST00000572152 PAK6Q9NQU5 681 aaPredicted RBP11.93□□□□□ -0.5
ABR-216ENST00000572152 DOCK3Q8IZD9 2030 aa11.93□□□□□ -0.5
ABR-216ENST00000572152 PRDM1O75626 825 aa11.92□□□□□ -0.5
ABR-216ENST00000572152 FLOT1O75955 427 aa11.92□□□□□ -0.5
ABR-216ENST00000572152 DSG3P32926 999 aa11.92□□□□□ -0.5
ABR-216ENST00000572152 RGS2P41220 211 aa11.92□□□□□ -0.5
ABR-216ENST00000572152 NUCB1Q02818 461 aa11.92□□□□□ -0.5
ABR-216ENST00000572152 WDR78Q5VTH9 848 aa11.92□□□□□ -0.5
ABR-216ENST00000572152 CHD1LQ86WJ1 897 aa11.92□□□□□ -0.5
ABR-216ENST00000572152 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.92□□□□□ -0.5
ABR-216ENST00000572152 ZNF287Q9HBT7 754 aa11.92□□□□□ -0.5
ABR-216ENST00000572152 GOPCQ9HD26 462 aa11.92□□□□□ -0.5
ABR-216ENST00000572152 NYAP2Q9P242 653 aa11.92□□□□□ -0.5
ABR-216ENST00000572152 RPTORQ8N122 1335 aa11.91□□□□□ -0.5
ABR-216ENST00000572152 PLXNB2O15031 1838 aa11.91□□□□□ -0.5
ABR-216ENST00000572152 IGKV6D-41A0A0C4DH26 115 aa11.91□□□□□ -0.5
ABR-216ENST00000572152 SLC15A5A6NIM6 579 aa11.91□□□□□ -0.5
ABR-216ENST00000572152 FOXP2O15409 715 aa11.91□□□□□ -0.5
ABR-216ENST00000572152 TFRCP02786 760 aaKnown RBP11.91□□□□□ -0.5
ABR-216ENST00000572152 SLC3A2P08195 630 aaKnown RBP11.91□□□□□ -0.5
ABR-216ENST00000572152 ZKSCAN1P17029 563 aaPredicted RBP11.91□□□□□ -0.5
ABR-216ENST00000572152 PTPREP23469 700 aa11.91□□□□□ -0.5
ABR-216ENST00000572152 PPARAQ07869 468 aa11.91□□□□□ -0.5
ABR-216ENST00000572152 MAP2K5Q13163 448 aa11.91□□□□□ -0.5
ABR-216ENST00000572152 UBE2Q1Q7Z7E8 422 aa11.91□□□□□ -0.5
ABR-216ENST00000572152 TRMT44Q8IYL2 757 aaKnown RBP11.91□□□□□ -0.5
ABR-216ENST00000572152 ZNF444Q8N0Y2 327 aaPredicted RBP11.91□□□□□ -0.5
ABR-216ENST00000572152 MB21D1Q8N884 522 aa11.91□□□□□ -0.5
ABR-216ENST00000572152 ATG4CQ96DT6 458 aa11.91□□□□□ -0.5
ABR-216ENST00000572152 APBA2Q99767 749 aa11.91□□□□□ -0.5
ABR-216ENST00000572152 MOV10L1Q9BXT6 1211 aaKnown RBP11.91□□□□□ -0.5
ABR-216ENST00000572152 SPATC1LQ9H0A9 340 aa11.91□□□□□ -0.5
ABR-216ENST00000572152 HMX1Q9NP08 348 aaPredicted RBP11.91□□□□□ -0.5
ABR-216ENST00000572152 HELLSQ9NRZ9 838 aa11.91□□□□□ -0.5
ABR-216ENST00000572152 IVNS1ABPQ9Y6Y0 642 aa11.91□□□□□ -0.5
ABR-216ENST00000572152 MYH8P13535 1937 aa11.91□□□□□ -0.5
ABR-216ENST00000572152 A0A0D9SFI3 127 aa11.9□□□□□ -0.5
ABR-216ENST00000572152 TRIM6-TRIM34B2RNG4 842 aa11.9□□□□□ -0.5
ABR-216ENST00000572152 RAD21O60216 631 aa11.9□□□□□ -0.5
ABR-216ENST00000572152 FARP2O94887 1054 aaPredicted RBP11.9□□□□□ -0.5
ABR-216ENST00000572152 PRKAR2AP13861 404 aaKnown RBP11.9□□□□□ -0.5
ABR-216ENST00000572152 CAPN2P17655 700 aa11.9□□□□□ -0.5
ABR-216ENST00000572152 PDE4BQ07343 736 aa11.9□□□□□ -0.5
ABR-216ENST00000572152 CCL14Q16627 93 aa11.9□□□□□ -0.5
ABR-216ENST00000572152 FAM83BQ5T0W9 1011 aa11.9□□□□□ -0.5
ABR-216ENST00000572152 MAP3K21Q5TCX8 1036 aa11.9□□□□□ -0.5
ABR-216ENST00000572152 VPS53Q5VIR6 699 aa11.9□□□□□ -0.5
ABR-216ENST00000572152 SAMD1Q6SPF0 538 aaPredicted RBP11.9□□□□□ -0.5
ABR-216ENST00000572152 TICAM2Q86XR7 235 aa11.9□□□□□ -0.5
ABR-216ENST00000572152 PLEKHM2Q8IWE5 1019 aa11.9□□□□□ -0.5
ABR-216ENST00000572152 SHCBP1Q8NEM2 672 aa11.9□□□□□ -0.5
ABR-216ENST00000572152 FAM227BQ96M60 508 aa11.9□□□□□ -0.5
ABR-216ENST00000572152 CRISPLD2Q9H0B8 497 aa11.9□□□□□ -0.5
ABR-216ENST00000572152 OSBPL3Q9H4L5 887 aa11.9□□□□□ -0.5
ABR-216ENST00000572152 FBXO28Q9NVF7 368 aa11.9□□□□□ -0.5
ABR-216ENST00000572152 CLIP2Q9UDT6 1046 aa11.9□□□□□ -0.5
ABR-216ENST00000572152 F5H6K3 240 aa11.89□□□□□ -0.51
ABR-216ENST00000572152 HOXC6P09630 235 aa11.89□□□□□ -0.51
ABR-216ENST00000572152 ERCC3P19447 782 aa11.89□□□□□ -0.51
ABR-216ENST00000572152 KLRC3Q07444 240 aa11.89□□□□□ -0.51
ABR-216ENST00000572152 NMIQ13287 307 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms