RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 NMIQ13287 307 aaPredicted RBP17.36■□□□□ 0.37
LITAF-208ENST00000571627 GPRC5AQ8NFJ5 357 aa17.36■□□□□ 0.37
LITAF-208ENST00000571627 COA7Q96BR5 231 aa17.36■□□□□ 0.37
LITAF-208ENST00000571627 TANGO6Q9C0B7 1094 aa17.36■□□□□ 0.37
LITAF-208ENST00000571627 OSBPL3Q9H4L5 887 aa17.36■□□□□ 0.37
LITAF-208ENST00000571627 TMX2Q9Y320 296 aa17.36■□□□□ 0.37
LITAF-208ENST00000571627 CNMDO75829 334 aa17.35■□□□□ 0.37
LITAF-208ENST00000571627 ELNP15502 786 aa17.35■□□□□ 0.37
LITAF-208ENST00000571627 ERVK-9P63128 1117 aa17.35■□□□□ 0.37
LITAF-208ENST00000571627 ERVK-24P63145 666 aa17.35■□□□□ 0.37
LITAF-208ENST00000571627 PPARAQ07869 468 aa17.35■□□□□ 0.37
LITAF-208ENST00000571627 Q3C1V9 767 aa17.35■□□□□ 0.37
LITAF-208ENST00000571627 ZNF589Q86UQ0 364 aaPredicted RBP17.35■□□□□ 0.37
LITAF-208ENST00000571627 TICAM2Q86XR7 235 aa17.35■□□□□ 0.37
LITAF-208ENST00000571627 PORCNQ9H237 461 aa17.35■□□□□ 0.37
LITAF-208ENST00000571627 VCPKMTQ9H867 229 aa17.35■□□□□ 0.37
LITAF-208ENST00000571627 KANSL2Q9H9L4 492 aa17.35■□□□□ 0.37
LITAF-208ENST00000571627 HELLSQ9NRZ9 838 aa17.35■□□□□ 0.37
LITAF-208ENST00000571627 COL11A1P12107 1806 aaPredicted RBP17.35■□□□□ 0.37
LITAF-208ENST00000571627 PDE4DIPQ5VU43 2346 aa17.35■□□□□ 0.37
LITAF-208ENST00000571627 SPDYE16A6NNV3 312 aaPredicted RBP17.34■□□□□ 0.37
LITAF-208ENST00000571627 ADCY3O60266 1144 aa17.34■□□□□ 0.37
LITAF-208ENST00000571627 MTFR1Q15390 333 aa17.34■□□□□ 0.37
LITAF-208ENST00000571627 GTF3C2Q8WUA4 911 aaPredicted RBP17.34■□□□□ 0.37
LITAF-208ENST00000571627 SH2D4AQ9H788 454 aa17.34■□□□□ 0.37
LITAF-208ENST00000571627 BIN2Q9UBW5 565 aaPredicted RBP17.34■□□□□ 0.37
LITAF-208ENST00000571627 MKI67P46013 3256 aaKnown RBP17.33■□□□□ 0.37
LITAF-208ENST00000571627 RAD21O60216 631 aa17.33■□□□□ 0.36
LITAF-208ENST00000571627 EN2P19622 333 aaPredicted RBP17.33■□□□□ 0.36
LITAF-208ENST00000571627 CTDSPL2Q05D32 466 aa17.33■□□□□ 0.36
LITAF-208ENST00000571627 MCMDC2Q4G0Z9 681 aa17.33■□□□□ 0.36
LITAF-208ENST00000571627 ZNF444Q8N0Y2 327 aaPredicted RBP17.33■□□□□ 0.36
LITAF-208ENST00000571627 SLAIN1Q8ND83 568 aa17.33■□□□□ 0.36
LITAF-208ENST00000571627 LPAR1Q92633 364 aa17.33■□□□□ 0.36
LITAF-208ENST00000571627 TMEM106CQ9BVX2 250 aa17.33■□□□□ 0.36
LITAF-208ENST00000571627 BTBD7Q9P203 1132 aa17.33■□□□□ 0.36
LITAF-208ENST00000571627 RABGAP1Q9Y3P9 1069 aa17.33■□□□□ 0.36
LITAF-208ENST00000571627 NEFLP07196 543 aa17.32■□□□□ 0.36
LITAF-208ENST00000571627 SDSP20132 328 aa17.32■□□□□ 0.36
LITAF-208ENST00000571627 IRF5Q13568 498 aa17.32■□□□□ 0.36
LITAF-208ENST00000571627 FAM47AQ5JRC9 791 aa17.32■□□□□ 0.36
LITAF-208ENST00000571627 SAMD1Q6SPF0 538 aaPredicted RBP17.32■□□□□ 0.36
LITAF-208ENST00000571627 INCENPQ9NQS7 918 aa17.32■□□□□ 0.36
LITAF-208ENST00000571627 GJD2Q9UKL4 321 aa17.32■□□□□ 0.36
LITAF-208ENST00000571627 CCDC171Q6TFL3 1326 aa17.31■□□□□ 0.36
LITAF-208ENST00000571627 IGKV6D-41A0A0C4DH26 115 aa17.31■□□□□ 0.36
LITAF-208ENST00000571627 FLOT1O75955 427 aa17.31■□□□□ 0.36
LITAF-208ENST00000571627 PDE4BQ07343 736 aa17.31■□□□□ 0.36
LITAF-208ENST00000571627 COG2Q14746 738 aa17.31■□□□□ 0.36
LITAF-208ENST00000571627 LBX2Q6XYB7 198 aa17.31■□□□□ 0.36
LITAF-208ENST00000571627 CCAR1Q8IX12 1150 aaKnown RBP17.31■□□□□ 0.36
LITAF-208ENST00000571627 ZNF287Q9HBT7 754 aa17.31■□□□□ 0.36
LITAF-208ENST00000571627 GOPCQ9HD26 462 aa17.31■□□□□ 0.36
LITAF-208ENST00000571627 TACC3Q9Y6A5 838 aa17.31■□□□□ 0.36
LITAF-208ENST00000571627 LAMA4Q16363 1823 aa17.31■□□□□ 0.36
LITAF-208ENST00000571627 WDR46O15213 610 aaKnown RBP17.3■□□□□ 0.36
LITAF-208ENST00000571627 INHAP05111 366 aa17.3■□□□□ 0.36
LITAF-208ENST00000571627 SLC3A2P08195 630 aaKnown RBP17.3■□□□□ 0.36
LITAF-208ENST00000571627 HSPD1P10809 573 aaKnown RBP17.3■□□□□ 0.36
LITAF-208ENST00000571627 CCL5P13501 91 aa17.3■□□□□ 0.36
LITAF-208ENST00000571627 MAPK4P31152 587 aa17.3■□□□□ 0.36
LITAF-208ENST00000571627 WDR78Q5VTH9 848 aa17.3■□□□□ 0.36
LITAF-208ENST00000571627 CWC27Q6UX04 472 aaKnown RBP17.3■□□□□ 0.36
LITAF-208ENST00000571627 GPR142Q7Z601 462 aa17.3■□□□□ 0.36
LITAF-208ENST00000571627 ATG4CQ96DT6 458 aa17.3■□□□□ 0.36
LITAF-208ENST00000571627 CEP95Q96GE4 821 aa17.3■□□□□ 0.36
LITAF-208ENST00000571627 NUP88Q99567 741 aaPredicted RBP17.3■□□□□ 0.36
LITAF-208ENST00000571627 FBXO28Q9NVF7 368 aa17.3■□□□□ 0.36
LITAF-208ENST00000571627 NYAP2Q9P242 653 aa17.3■□□□□ 0.36
LITAF-208ENST00000571627 CLIP2Q9UDT6 1046 aa17.3■□□□□ 0.36
LITAF-208ENST00000571627 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.3■□□□□ 0.36
LITAF-208ENST00000571627 PLIN4Q96Q06 1357 aa17.29■□□□□ 0.36
LITAF-208ENST00000571627 FGAP02671 866 aa17.29■□□□□ 0.36
LITAF-208ENST00000571627 TSPY3P0CV98 308 aa17.29■□□□□ 0.36
LITAF-208ENST00000571627 TSPY8P0CW00 308 aa17.29■□□□□ 0.36
LITAF-208ENST00000571627 GSPT1P15170 499 aaKnown RBP17.29■□□□□ 0.36
LITAF-208ENST00000571627 CYP2B6P20813 491 aa17.29■□□□□ 0.36
LITAF-208ENST00000571627 UBXN2AP68543 259 aa17.29■□□□□ 0.36
LITAF-208ENST00000571627 ALX1Q15699 326 aa17.29■□□□□ 0.36
LITAF-208ENST00000571627 FAM83BQ5T0W9 1011 aa17.29■□□□□ 0.36
LITAF-208ENST00000571627 PXYLP1Q8TE99 480 aa17.29■□□□□ 0.36
LITAF-208ENST00000571627 UNC93B1Q9H1C4 597 aa17.29■□□□□ 0.36
LITAF-208ENST00000571627 CWC22Q9HCG8 908 aaKnown RBP17.29■□□□□ 0.36
LITAF-208ENST00000571627 DIAPH3Q9NSV4 1193 aa17.29■□□□□ 0.36
LITAF-208ENST00000571627 DSG3P32926 999 aa17.28■□□□□ 0.36
LITAF-208ENST00000571627 CCNA1P78396 465 aa17.28■□□□□ 0.36
LITAF-208ENST00000571627 TFAP4Q01664 338 aa17.28■□□□□ 0.36
LITAF-208ENST00000571627 TTC22Q5TAA0 569 aa17.28■□□□□ 0.36
LITAF-208ENST00000571627 CENPQQ7L2Z9 268 aaPredicted RBP17.28■□□□□ 0.36
LITAF-208ENST00000571627 PLEKHH3Q7Z736 793 aa17.28■□□□□ 0.36
LITAF-208ENST00000571627 LRRC47Q8N1G4 583 aaKnown RBP17.28■□□□□ 0.36
LITAF-208ENST00000571627 NEDD1Q8NHV4 660 aa17.28■□□□□ 0.36
LITAF-208ENST00000571627 NUDT12Q9BQG2 462 aa17.28■□□□□ 0.36
LITAF-208ENST00000571627 RNF208Q9H0X6 261 aa17.28■□□□□ 0.36
LITAF-208ENST00000571627 MTMR4Q9NYA4 1195 aa17.28■□□□□ 0.36
LITAF-208ENST00000571627 HOXC10Q9NYD6 342 aa17.28■□□□□ 0.36
LITAF-208ENST00000571627 ANAPC4Q9UJX5 808 aa17.28■□□□□ 0.36
LITAF-208ENST00000571627 F5H6K3 240 aa17.27■□□□□ 0.36
LITAF-208ENST00000571627 NDUFB10O96000 172 aa17.27■□□□□ 0.36
LITAF-208ENST00000571627 HAND2P61296 217 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms