RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 GLRX3O76003 335 aaKnown RBP21.22■□□□□ 0.99
CIITA-206ENST00000571190 COG2Q14746 738 aa21.22■□□□□ 0.99
CIITA-206ENST00000571190 WDR78Q5VTH9 848 aa21.22■□□□□ 0.99
CIITA-206ENST00000571190 CLEC10AQ8IUN9 316 aa21.22■□□□□ 0.99
CIITA-206ENST00000571190 HAUS7Q99871 368 aa21.22■□□□□ 0.99
CIITA-206ENST00000571190 MOV10L1Q9BXT6 1211 aaKnown RBP21.22■□□□□ 0.99
CIITA-206ENST00000571190 CWC22Q9HCG8 908 aaKnown RBP21.22■□□□□ 0.99
CIITA-206ENST00000571190 CYP2D7A0A087X1C5 515 aa21.21■□□□□ 0.99
CIITA-206ENST00000571190 AKR1B1P15121 316 aa21.21■□□□□ 0.99
CIITA-206ENST00000571190 C20orf194Q5TEA3 1177 aa21.21■□□□□ 0.99
CIITA-206ENST00000571190 TMEM179Q6ZVK1 233 aa21.21■□□□□ 0.99
CIITA-206ENST00000571190 ATP8A2Q9NTI2 1148 aa21.21■□□□□ 0.99
CIITA-206ENST00000571190 MAGEA10P43363 369 aaPredicted RBP21.2■□□□□ 0.98
CIITA-206ENST00000571190 LRRC26Q2I0M4 334 aa21.2■□□□□ 0.98
CIITA-206ENST00000571190 C12orf60Q5U649 245 aa21.2■□□□□ 0.98
CIITA-206ENST00000571190 MFSD14CQ5VZR4 134 aa21.2■□□□□ 0.98
CIITA-206ENST00000571190 TRPV1Q8NER1 839 aa21.2■□□□□ 0.98
CIITA-206ENST00000571190 HOXC10Q9NYD6 342 aa21.2■□□□□ 0.98
CIITA-206ENST00000571190 SWAP70Q9UH65 585 aa21.2■□□□□ 0.98
CIITA-206ENST00000571190 IVNS1ABPQ9Y6Y0 642 aa21.2■□□□□ 0.98
CIITA-206ENST00000571190 CYP2C19P33261 490 aa21.19■□□□□ 0.98
CIITA-206ENST00000571190 TANGO6Q9C0B7 1094 aa21.19■□□□□ 0.98
CIITA-206ENST00000571190 RCAN3Q9UKA8 241 aa21.19■□□□□ 0.98
CIITA-206ENST00000571190 TMX2Q9Y320 296 aa21.19■□□□□ 0.98
CIITA-206ENST00000571190 USP17L12C9JPN9 530 aa21.18■□□□□ 0.98
CIITA-206ENST00000571190 USP17L21D6R901 530 aa21.18■□□□□ 0.98
CIITA-206ENST00000571190 DSG3P32926 999 aa21.18■□□□□ 0.98
CIITA-206ENST00000571190 CDK8P49336 464 aa21.18■□□□□ 0.98
CIITA-206ENST00000571190 ATP2B2Q01814 1243 aa21.18■□□□□ 0.98
CIITA-206ENST00000571190 UBE3CQ15386 1083 aa21.18■□□□□ 0.98
CIITA-206ENST00000571190 SPATC1LQ9H0A9 340 aa21.18■□□□□ 0.98
CIITA-206ENST00000571190 DDX20Q9UHI6 824 aaKnown RBP21.18■□□□□ 0.98
CIITA-206ENST00000571190 MYH1P12882 1939 aa21.17■□□□□ 0.98
CIITA-206ENST00000571190 SMARCA5O60264 1052 aaPredicted RBP21.17■□□□□ 0.98
CIITA-206ENST00000571190 COBLO75128 1261 aa21.17■□□□□ 0.98
CIITA-206ENST00000571190 ERCC3P19447 782 aa21.17■□□□□ 0.98
CIITA-206ENST00000571190 ADORA2AP29274 412 aa21.17■□□□□ 0.98
CIITA-206ENST00000571190 C16orf86Q6ZW13 317 aa21.17■□□□□ 0.98
CIITA-206ENST00000571190 SPICE1Q8N0Z3 855 aa21.17■□□□□ 0.98
CIITA-206ENST00000571190 SHCBP1Q8NEM2 672 aa21.17■□□□□ 0.98
CIITA-206ENST00000571190 LPAR1Q92633 364 aa21.17■□□□□ 0.98
CIITA-206ENST00000571190 ATG4CQ96DT6 458 aa21.17■□□□□ 0.98
CIITA-206ENST00000571190 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.17■□□□□ 0.98
CIITA-206ENST00000571190 PUS7LQ9H0K6 701 aaKnown RBP21.17■□□□□ 0.98
CIITA-206ENST00000571190 VCPKMTQ9H867 229 aa21.17■□□□□ 0.98
CIITA-206ENST00000571190 CYBAP13498 195 aa21.16■□□□□ 0.98
CIITA-206ENST00000571190 ICA1Q05084 483 aa21.16■□□□□ 0.98
CIITA-206ENST00000571190 CTR9Q6PD62 1173 aa21.16■□□□□ 0.98
CIITA-206ENST00000571190 CCDC17Q96LX7 622 aa21.16■□□□□ 0.98
CIITA-206ENST00000571190 ALPK3Q96L96 1907 aa21.16■□□□□ 0.98
CIITA-206ENST00000571190 STRNO43815 780 aa21.15■□□□□ 0.98
CIITA-206ENST00000571190 MB21D1Q8N884 522 aa21.15■□□□□ 0.98
CIITA-206ENST00000571190 LRRCC1Q9C099 1032 aa21.15■□□□□ 0.98
CIITA-206ENST00000571190 CHMP4BQ9H444 224 aaKnown RBP21.15■□□□□ 0.98
CIITA-206ENST00000571190 SLC4A4Q9Y6R1 1079 aa21.15■□□□□ 0.98
CIITA-206ENST00000571190 FLOT1O75955 427 aa21.14■□□□□ 0.97
CIITA-206ENST00000571190 CNGA1P29973 690 aa21.14■□□□□ 0.97
CIITA-206ENST00000571190 OLFML2BQ68BL8 750 aa21.14■□□□□ 0.97
CIITA-206ENST00000571190 DPP9Q86TI2 863 aa21.14■□□□□ 0.97
CIITA-206ENST00000571190 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.14■□□□□ 0.97
CIITA-206ENST00000571190 SENP6Q9GZR1 1112 aaPredicted RBP21.14■□□□□ 0.97
CIITA-206ENST00000571190 ARHGEF10LQ9HCE6 1279 aa21.14■□□□□ 0.97
CIITA-206ENST00000571190 LAMA3Q16787 3333 aa21.13■□□□□ 0.97
CIITA-206ENST00000571190 MSCO60682 206 aa21.13■□□□□ 0.97
CIITA-206ENST00000571190 EEF2P13639 858 aaKnown RBP21.13■□□□□ 0.97
CIITA-206ENST00000571190 TMEM132BQ14DG7 1078 aa21.13■□□□□ 0.97
CIITA-206ENST00000571190 LRIT3Q3SXY7 679 aa21.13■□□□□ 0.97
CIITA-206ENST00000571190 TDHQ8IZJ6 230 aa21.13■□□□□ 0.97
CIITA-206ENST00000571190 ADAMTS5Q9UNA0 930 aa21.13■□□□□ 0.97
CIITA-206ENST00000571190 WDR46O15213 610 aaKnown RBP21.12■□□□□ 0.97
CIITA-206ENST00000571190 STRBPQ96SI9 672 aaKnown RBP21.12■□□□□ 0.97
CIITA-206ENST00000571190 UBE2OQ9C0C9 1292 aaKnown RBP21.12■□□□□ 0.97
CIITA-206ENST00000571190 MROH8Q9H579 483 aa21.12■□□□□ 0.97
CIITA-206ENST00000571190 SH2D4AQ9H788 454 aa21.12■□□□□ 0.97
CIITA-206ENST00000571190 FBXO28Q9NVF7 368 aa21.12■□□□□ 0.97
CIITA-206ENST00000571190 NAV1Q8NEY1 1877 aa21.11■□□□□ 0.97
CIITA-206ENST00000571190 DNM1LO00429 736 aa21.11■□□□□ 0.97
CIITA-206ENST00000571190 PLS1Q14651 629 aa21.11■□□□□ 0.97
CIITA-206ENST00000571190 PRAMEF19Q5SWL8 479 aa21.11■□□□□ 0.97
CIITA-206ENST00000571190 NCAPG2Q86XI2 1143 aa21.11■□□□□ 0.97
CIITA-206ENST00000571190 ABRAQ8N0Z2 381 aa21.11■□□□□ 0.97
CIITA-206ENST00000571190 KANSL2Q9H9L4 492 aa21.11■□□□□ 0.97
CIITA-206ENST00000571190 ECHDC1Q9NTX5 307 aa21.11■□□□□ 0.97
CIITA-206ENST00000571190 ATN1P54259 1190 aaPredicted RBP21.1■□□□□ 0.97
CIITA-206ENST00000571190 MDM2Q00987 491 aaPredicted RBP21.1■□□□□ 0.97
CIITA-206ENST00000571190 GJC2Q5T442 439 aaPredicted RBP21.1■□□□□ 0.97
CIITA-206ENST00000571190 ANO1Q5XXA6 986 aa21.1■□□□□ 0.97
CIITA-206ENST00000571190 ZSCAN25Q6NSZ9 544 aa21.1■□□□□ 0.97
CIITA-206ENST00000571190 SAMD1Q6SPF0 538 aaPredicted RBP21.1■□□□□ 0.97
CIITA-206ENST00000571190 GSG1L2A8MUP6 293 aa21.09■□□□□ 0.97
CIITA-206ENST00000571190 GPR153Q6NV75 609 aa21.09■□□□□ 0.97
CIITA-206ENST00000571190 AMOTL1Q8IY63 956 aa21.09■□□□□ 0.97
CIITA-206ENST00000571190 OSBP2Q969R2 916 aa21.09■□□□□ 0.97
CIITA-206ENST00000571190 MAML3Q96JK9 1138 aa21.09■□□□□ 0.97
CIITA-206ENST00000571190 SEPT4O43236 478 aa21.08■□□□□ 0.97
CIITA-206ENST00000571190 SBK1Q52WX2 424 aa21.08■□□□□ 0.97
CIITA-206ENST00000571190 TSHZ3Q63HK5 1081 aa21.08■□□□□ 0.97
CIITA-206ENST00000571190 Q7L0L9 218 aa21.08■□□□□ 0.97
CIITA-206ENST00000571190 KBTBD3Q8NAB2 608 aa21.08■□□□□ 0.97
CIITA-206ENST00000571190 REPS2Q8NFH8 660 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms