RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 MYLIPQ8WY64 445 aa15.94■□□□□ 0.14
CCDC40-205ENST00000571028 WDR18Q9BV38 432 aa15.94■□□□□ 0.14
CCDC40-205ENST00000571028 PUS7LQ9H0K6 701 aaKnown RBP15.94■□□□□ 0.14
CCDC40-205ENST00000571028 SEMA6BQ9H3T3 888 aa15.94■□□□□ 0.14
CCDC40-205ENST00000571028 PRDM5Q9NQX1 630 aaPredicted RBP15.94■□□□□ 0.14
CCDC40-205ENST00000571028 ATP11BQ9Y2G3 1177 aa15.94■□□□□ 0.14
CCDC40-205ENST00000571028 GTF3C3Q9Y5Q9 886 aa15.94■□□□□ 0.14
CCDC40-205ENST00000571028 C19orf81C9J6K1 198 aa15.93■□□□□ 0.14
CCDC40-205ENST00000571028 ZFYP08048 801 aaPredicted RBP15.93■□□□□ 0.14
CCDC40-205ENST00000571028 SDSP20132 328 aa15.93■□□□□ 0.14
CCDC40-205ENST00000571028 RTP1P59025 263 aa15.93■□□□□ 0.14
CCDC40-205ENST00000571028 PPP4CP60510 307 aa15.93■□□□□ 0.14
CCDC40-205ENST00000571028 CCNA1P78396 465 aa15.93■□□□□ 0.14
CCDC40-205ENST00000571028 CRACR2BQ8N4Y2 399 aaPredicted RBP15.93■□□□□ 0.14
CCDC40-205ENST00000571028 APPBP2Q92624 585 aa15.93■□□□□ 0.14
CCDC40-205ENST00000571028 OSBP2Q969R2 916 aa15.93■□□□□ 0.14
CCDC40-205ENST00000571028 SEC62Q99442 399 aaKnown RBP15.93■□□□□ 0.14
CCDC40-205ENST00000571028 PORCNQ9H237 461 aa15.93■□□□□ 0.14
CCDC40-205ENST00000571028 PI4KBQ9UBF8 816 aa15.93■□□□□ 0.14
CCDC40-205ENST00000571028 DDX20Q9UHI6 824 aaKnown RBP15.93■□□□□ 0.14
CCDC40-205ENST00000571028 SAP30BPQ9UHR5 308 aaKnown RBP15.93■□□□□ 0.14
CCDC40-205ENST00000571028 MAST2Q6P0Q8 1798 aa15.92■□□□□ 0.14
CCDC40-205ENST00000571028 DOCK3Q8IZD9 2030 aa15.92■□□□□ 0.14
CCDC40-205ENST00000571028 USP17L10C9JJH3 530 aa15.92■□□□□ 0.14
CCDC40-205ENST00000571028 M0R2C6 588 aa15.92■□□□□ 0.14
CCDC40-205ENST00000571028 DNM1LO00429 736 aa15.92■□□□□ 0.14
CCDC40-205ENST00000571028 PRKAB2O43741 272 aa15.92■□□□□ 0.14
CCDC40-205ENST00000571028 MAP2K5Q13163 448 aa15.92■□□□□ 0.14
CCDC40-205ENST00000571028 MORN1Q5T089 497 aa15.92■□□□□ 0.14
CCDC40-205ENST00000571028 USP6NLQ92738 828 aa15.92■□□□□ 0.14
CCDC40-205ENST00000571028 RIOK1Q9BRS2 568 aaKnown RBP15.92■□□□□ 0.14
CCDC40-205ENST00000571028 CRNKL1Q9BZJ0 848 aaKnown RBP15.92■□□□□ 0.14
CCDC40-205ENST00000571028 DIAPH3Q9NSV4 1193 aa15.92■□□□□ 0.14
CCDC40-205ENST00000571028 RBPJLQ9UBG7 517 aa15.92■□□□□ 0.14
CCDC40-205ENST00000571028 SMAD3P84022 425 aaKnown RBP15.91■□□□□ 0.14
CCDC40-205ENST00000571028 ATP2B2Q01814 1243 aa15.91■□□□□ 0.14
CCDC40-205ENST00000571028 NMIQ13287 307 aaPredicted RBP15.91■□□□□ 0.14
CCDC40-205ENST00000571028 RRP1BQ14684 758 aaKnown RBP15.91■□□□□ 0.14
CCDC40-205ENST00000571028 SHHQ15465 462 aa15.91■□□□□ 0.14
CCDC40-205ENST00000571028 TMED8Q6PL24 325 aaPredicted RBP15.91■□□□□ 0.14
CCDC40-205ENST00000571028 CCDC129Q6ZRS4 1044 aa15.91■□□□□ 0.14
CCDC40-205ENST00000571028 SDR42E1Q8WUS8 393 aa15.91■□□□□ 0.14
CCDC40-205ENST00000571028 LPAR1Q92633 364 aa15.91■□□□□ 0.14
CCDC40-205ENST00000571028 FAM227BQ96M60 508 aa15.91■□□□□ 0.14
CCDC40-205ENST00000571028 DHX36Q9H2U1 1008 aaKnown RBP15.91■□□□□ 0.14
CCDC40-205ENST00000571028 SLC4A4Q9Y6R1 1079 aa15.91■□□□□ 0.14
CCDC40-205ENST00000571028 IVNS1ABPQ9Y6Y0 642 aa15.91■□□□□ 0.14
CCDC40-205ENST00000571028 MYCNP04198 464 aaPredicted RBP15.9■□□□□ 0.14
CCDC40-205ENST00000571028 COL9A1P20849 921 aa15.9■□□□□ 0.14
CCDC40-205ENST00000571028 Q3C1V9 767 aa15.9■□□□□ 0.14
CCDC40-205ENST00000571028 ZMYM1Q5SVZ6 1142 aa15.9■□□□□ 0.14
CCDC40-205ENST00000571028 FLT1P17948 1338 aa15.9■□□□□ 0.14
CCDC40-205ENST00000571028 LAMA2P24043 3122 aaKnown RBP15.9■□□□□ 0.14
CCDC40-205ENST00000571028 PLXNB2O15031 1838 aa15.89■□□□□ 0.13
CCDC40-205ENST00000571028 EYSQ5T1H1 3165 aa15.89■□□□□ 0.13
CCDC40-205ENST00000571028 A0A0D9SFI3 127 aa15.89■□□□□ 0.13
CCDC40-205ENST00000571028 KBTBD13C9JR72 458 aa15.89■□□□□ 0.13
CCDC40-205ENST00000571028 GPAA1O43292 621 aa15.89■□□□□ 0.13
CCDC40-205ENST00000571028 APPP05067 770 aa15.89■□□□□ 0.13
CCDC40-205ENST00000571028 C9orf50Q5SZB4 431 aa15.89■□□□□ 0.13
CCDC40-205ENST00000571028 CWC27Q6UX04 472 aaKnown RBP15.89■□□□□ 0.13
CCDC40-205ENST00000571028 CERS3Q8IU89 383 aa15.89■□□□□ 0.13
CCDC40-205ENST00000571028 ARRDC4Q8NCT1 418 aa15.89■□□□□ 0.13
CCDC40-205ENST00000571028 FEZ1Q99689 392 aa15.89■□□□□ 0.13
CCDC40-205ENST00000571028 GINM1Q9NU53 330 aa15.89■□□□□ 0.13
CCDC40-205ENST00000571028 PALD1Q9ULE6 856 aa15.89■□□□□ 0.13
CCDC40-205ENST00000571028 SPTBN5Q9NRC6 3674 aaKnown RBP15.88■□□□□ 0.13
CCDC40-205ENST00000571028 GDF11O95390 407 aa15.88■□□□□ 0.13
CCDC40-205ENST00000571028 USP17L2Q6R6M4 530 aa15.88■□□□□ 0.13
CCDC40-205ENST00000571028 BADQ92934 168 aa15.88■□□□□ 0.13
CCDC40-205ENST00000571028 STRBPQ96SI9 672 aaKnown RBP15.88■□□□□ 0.13
CCDC40-205ENST00000571028 MCM9Q9NXL9 1143 aa15.88■□□□□ 0.13
CCDC40-205ENST00000571028 RABGAP1Q9Y3P9 1069 aa15.88■□□□□ 0.13
CCDC40-205ENST00000571028 SLC15A5A6NIM6 579 aa15.87■□□□□ 0.13
CCDC40-205ENST00000571028 TNFRSF10AO00220 468 aa15.87■□□□□ 0.13
CCDC40-205ENST00000571028 POLR3DP05423 398 aaPredicted RBP15.87■□□□□ 0.13
CCDC40-205ENST00000571028 MCMDC2Q4G0Z9 681 aa15.87■□□□□ 0.13
CCDC40-205ENST00000571028 TJAP1Q5JTD0 557 aa15.87■□□□□ 0.13
CCDC40-205ENST00000571028 GJC2Q5T442 439 aaPredicted RBP15.87■□□□□ 0.13
CCDC40-205ENST00000571028 DDRGK1Q96HY6 314 aa15.87■□□□□ 0.13
CCDC40-205ENST00000571028 TTYH1Q9H313 450 aaPredicted RBP15.87■□□□□ 0.13
CCDC40-205ENST00000571028 HELLSQ9NRZ9 838 aa15.87■□□□□ 0.13
CCDC40-205ENST00000571028 ZBTB21Q9ULJ3 1066 aa15.87■□□□□ 0.13
CCDC40-205ENST00000571028 TMEM265A0A087WTH1 108 aa15.86■□□□□ 0.13
CCDC40-205ENST00000571028 HIP1O00291 1037 aa15.86■□□□□ 0.13
CCDC40-205ENST00000571028 HLA-DOAP06340 250 aa15.86■□□□□ 0.13
CCDC40-205ENST00000571028 CYP2D6P10635 497 aa15.86■□□□□ 0.13
CCDC40-205ENST00000571028 PTPREP23469 700 aa15.86■□□□□ 0.13
CCDC40-205ENST00000571028 CYP2C19P33261 490 aa15.86■□□□□ 0.13
CCDC40-205ENST00000571028 ZYXQ15942 572 aaKnown RBP15.86■□□□□ 0.13
CCDC40-205ENST00000571028 FOXP4Q8IVH2 680 aaPredicted RBP15.86■□□□□ 0.13
CCDC40-205ENST00000571028 RNPC3Q96LT9 517 aaKnown RBP15.86■□□□□ 0.13
CCDC40-205ENST00000571028 FLRT1Q9NZU1 646 aa15.86■□□□□ 0.13
CCDC40-205ENST00000571028 ATAD5Q96QE3 1844 aa15.86■□□□□ 0.13
CCDC40-205ENST00000571028 USP17L15C9J2P7 530 aa15.85■□□□□ 0.13
CCDC40-205ENST00000571028 USP17L13C9JLJ4 530 aa15.85■□□□□ 0.13
CCDC40-205ENST00000571028 USP17L11C9JVI0 530 aa15.85■□□□□ 0.13
CCDC40-205ENST00000571028 USP17L18D6R9N7 530 aa15.85■□□□□ 0.13
CCDC40-205ENST00000571028 USP17L22D6RA61 530 aa15.85■□□□□ 0.13
CCDC40-205ENST00000571028 USP17L17D6RBQ6 530 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms