RNA–Protein interactions for RNA: ENST00000570977.1

TOM1L1-208, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-208ENST00000570977 CNTNAP3Q9BZ76 1288 aa7.54□□□□□ -1.2
TOM1L1-208ENST00000570977 GPAMQ9HCL2 828 aa7.54□□□□□ -1.2
TOM1L1-208ENST00000570977 IVNS1ABPQ9Y6Y0 642 aa7.54□□□□□ -1.2
TOM1L1-208ENST00000570977 RANBP2P49792 3224 aaKnown RBP7.54□□□□□ -1.2
TOM1L1-208ENST00000570977 COL6A3P12111 3177 aa7.54□□□□□ -1.2
TOM1L1-208ENST00000570977 CENPFP49454 3210 aa7.54□□□□□ -1.2
TOM1L1-208ENST00000570977 LRRC37AA6NMS7 1700 aa7.53□□□□□ -1.2
TOM1L1-208ENST00000570977 WTIPA6NIX2 430 aaPredicted RBP7.53□□□□□ -1.2
TOM1L1-208ENST00000570977 TMEM229AB2RXF0 380 aa7.53□□□□□ -1.2
TOM1L1-208ENST00000570977 ATP9BO43861 1147 aa7.53□□□□□ -1.2
TOM1L1-208ENST00000570977 LIG1P18858 919 aa7.53□□□□□ -1.2
TOM1L1-208ENST00000570977 ARID4AP29374 1257 aaPredicted RBP7.53□□□□□ -1.2
TOM1L1-208ENST00000570977 KRT76Q01546 638 aa7.53□□□□□ -1.2
TOM1L1-208ENST00000570977 MYBPC2Q14324 1141 aa7.53□□□□□ -1.2
TOM1L1-208ENST00000570977 SLC9C1Q4G0N8 1177 aa7.53□□□□□ -1.2
TOM1L1-208ENST00000570977 C4orf17Q53FE4 359 aa7.53□□□□□ -1.2
TOM1L1-208ENST00000570977 CC2D1BQ5T0F9 858 aaKnown RBP7.53□□□□□ -1.2
TOM1L1-208ENST00000570977 CCER1Q8TC90 406 aaPredicted RBP7.53□□□□□ -1.2
TOM1L1-208ENST00000570977 NANOS1Q8WY41 292 aaKnown RBP7.53□□□□□ -1.2
TOM1L1-208ENST00000570977 DPF3Q92784 378 aa7.53□□□□□ -1.2
TOM1L1-208ENST00000570977 MRRFQ96E11 262 aaKnown RBP7.53□□□□□ -1.2
TOM1L1-208ENST00000570977 WNK4Q96J92 1243 aa7.53□□□□□ -1.2
TOM1L1-208ENST00000570977 PTPN18Q99952 460 aa7.53□□□□□ -1.2
TOM1L1-208ENST00000570977 MTA3Q9BTC8 594 aa7.53□□□□□ -1.2
TOM1L1-208ENST00000570977 COL25A1Q9BXS0 654 aaPredicted RBP7.53□□□□□ -1.2
TOM1L1-208ENST00000570977 ANGEL1Q9UNK9 670 aaKnown RBP7.53□□□□□ -1.2
TOM1L1-208ENST00000570977 PCDHGA11Q9Y5H2 935 aa7.53□□□□□ -1.2
TOM1L1-208ENST00000570977 MAFBQ9Y5Q3 323 aaPredicted RBP7.53□□□□□ -1.2
TOM1L1-208ENST00000570977 SCN9AQ15858 1988 aa7.52□□□□□ -1.21
TOM1L1-208ENST00000570977 SOX1O00570 391 aaPredicted RBP7.52□□□□□ -1.21
TOM1L1-208ENST00000570977 RAB11FIP3O75154 756 aa7.52□□□□□ -1.21
TOM1L1-208ENST00000570977 EIF3JO75822 258 aaKnown RBP7.52□□□□□ -1.21
TOM1L1-208ENST00000570977 PLA2G4AP47712 749 aa7.52□□□□□ -1.21
TOM1L1-208ENST00000570977 RNFT1Q5M7Z0 435 aa7.52□□□□□ -1.21
TOM1L1-208ENST00000570977 AXDND1Q5T1B0 1012 aaPredicted RBP7.52□□□□□ -1.21
TOM1L1-208ENST00000570977 CASC1Q6TDU7 716 aa7.52□□□□□ -1.21
TOM1L1-208ENST00000570977 KRBA2Q6ZNG9 492 aa7.52□□□□□ -1.21
TOM1L1-208ENST00000570977 COPS6Q7L5N1 327 aa7.52□□□□□ -1.21
TOM1L1-208ENST00000570977 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.52□□□□□ -1.21
TOM1L1-208ENST00000570977 ZNF837Q96EG3 531 aaPredicted RBP7.52□□□□□ -1.21
TOM1L1-208ENST00000570977 ZBED3Q96IU2 234 aaPredicted RBP7.52□□□□□ -1.21
TOM1L1-208ENST00000570977 THUMPD2Q9BTF0 503 aaKnown RBP7.52□□□□□ -1.21
TOM1L1-208ENST00000570977 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.52□□□□□ -1.217e-19■■■■■ 323
TOM1L1-208ENST00000570977 NUDCQ9Y266 331 aa7.52□□□□□ -1.21
TOM1L1-208ENST00000570977 DYRK1BQ9Y463 629 aa7.52□□□□□ -1.21
TOM1L1-208ENST00000570977 PTCH2Q9Y6C5 1203 aa7.52□□□□□ -1.21
TOM1L1-208ENST00000570977 ZBTB7BO15156 539 aaPredicted RBP7.51□□□□□ -1.21
TOM1L1-208ENST00000570977 UFL1O94874 794 aa7.51□□□□□ -1.21
TOM1L1-208ENST00000570977 PRKG1Q13976 671 aa7.51□□□□□ -1.21
TOM1L1-208ENST00000570977 SF3A1Q15459 793 aaKnown RBP7.51□□□□□ -1.21
TOM1L1-208ENST00000570977 PROSER3Q2NL68 480 aa7.51□□□□□ -1.21
TOM1L1-208ENST00000570977 DACT2Q5SW24 774 aa7.51□□□□□ -1.21
TOM1L1-208ENST00000570977 APOBEC3FQ8IUX4 373 aaKnown RBP7.51□□□□□ -1.21
TOM1L1-208ENST00000570977 OGFOD1Q8N543 542 aa7.51□□□□□ -1.21
TOM1L1-208ENST00000570977 SHISA4Q96DD7 197 aa7.51□□□□□ -1.21
TOM1L1-208ENST00000570977 ISCA1Q9BUE6 129 aa7.51□□□□□ -1.21
TOM1L1-208ENST00000570977 GGA1Q9UJY5 639 aa7.51□□□□□ -1.21
TOM1L1-208ENST00000570977 KIAA1024Q9UPX6 916 aa7.51□□□□□ -1.21
TOM1L1-208ENST00000570977 STXBP5LQ9Y2K9 1186 aa7.51□□□□□ -1.21
TOM1L1-208ENST00000570977 NR2E3Q9Y5X4 410 aa7.51□□□□□ -1.21
TOM1L1-208ENST00000570977 LAMB4A4D0S4 1761 aa7.51□□□□□ -1.21
TOM1L1-208ENST00000570977 KDM3BQ7LBC6 1761 aa7.51□□□□□ -1.21
TOM1L1-208ENST00000570977 PPP1R12BO60237 982 aaPredicted RBP7.5□□□□□ -1.21
TOM1L1-208ENST00000570977 U2AF1L5P0DN76 240 aaPredicted RBP7.5□□□□□ -1.21
TOM1L1-208ENST00000570977 SMTNP53814 917 aa7.5□□□□□ -1.21
TOM1L1-208ENST00000570977 PRMT2P55345 433 aa7.5□□□□□ -1.21
TOM1L1-208ENST00000570977 U2AF1Q01081 240 aaKnown RBP eCLIP7.5□□□□□ -1.21
TOM1L1-208ENST00000570977 TRIM28Q13263 835 aaKnown RBP7.5□□□□□ -1.21
TOM1L1-208ENST00000570977 DBN1Q16643 649 aa7.5□□□□□ -1.21
TOM1L1-208ENST00000570977 ZSCAN1Q8NBB4 408 aa7.5□□□□□ -1.21
TOM1L1-208ENST00000570977 RHBDD1Q8TEB9 315 aa7.5□□□□□ -1.21
TOM1L1-208ENST00000570977 XAGE3Q8WTP9 111 aa7.5□□□□□ -1.21
TOM1L1-208ENST00000570977 FAM89AQ96GI7 184 aa7.5□□□□□ -1.21
TOM1L1-208ENST00000570977 CLMNQ96JQ2 1002 aa7.5□□□□□ -1.21
TOM1L1-208ENST00000570977 HTATIP2Q9BUP3 242 aa7.5□□□□□ -1.21
TOM1L1-208ENST00000570977 DEFB129Q9H1M3 183 aa7.5□□□□□ -1.21
TOM1L1-208ENST00000570977 KIAA1522Q9P206 1035 aaPredicted RBP7.5□□□□□ -1.21
TOM1L1-208ENST00000570977 ANKIB1Q9P2G1 1089 aa7.5□□□□□ -1.21
TOM1L1-208ENST00000570977 USP3Q9Y6I4 520 aa7.5□□□□□ -1.21
TOM1L1-208ENST00000570977 LAMB2P55268 1798 aa7.5□□□□□ -1.21
TOM1L1-208ENST00000570977 MYO3BQ8WXR4 1341 aa7.5□□□□□ -1.21
TOM1L1-208ENST00000570977 TAF1P21675 1872 aa7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 TTC36A6NLP5 189 aa7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 NRDCO43847 1150 aa7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 LZTS3O60299 673 aaPredicted RBP7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 ANXA1P04083 346 aa7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 EIF2S2P20042 333 aaKnown RBP7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 LORP23490 312 aaPredicted RBP7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 ATP2B4P23634 1241 aa7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 BMP8BP34820 402 aa7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 GJA8P48165 433 aa7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 CLDN10P78369 228 aa7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 CNGB1Q14028 1251 aaPredicted RBP7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 STRIP1Q5VSL9 837 aa7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 PLEKHM2Q8IWE5 1019 aa7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 TRIM22Q8IYM9 498 aa7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 TPCN2Q8NHX9 752 aa7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 SH3TC2Q8TF17 1288 aa7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 GTPBP3Q969Y2 492 aaKnown RBP7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 CFAP53Q96M91 514 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms