RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 KIF22Q14807 665 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 FAM83BQ5T0W9 1011 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 BEND3Q5T5X7 828 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 ANKRD45Q5TZF3 282 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 PRPF38BQ5VTL8 546 aaKnown RBP4.12□□□□□ -1.75
SMG6-208ENST00000570874 JAKMIP3Q5VZ66 844 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 PPP4R3AQ6IN85 833 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 PDXDC2PQ6P474 469 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 MMS22LQ6ZRQ5 1243 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 C14orf80Q86SX3 495 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 TTC30AQ86WT1 665 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 DZIP3Q86Y13 1208 aaKnown RBP4.12□□□□□ -1.75
SMG6-208ENST00000570874 ZNF354CQ86Y25 554 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 PI4KAP1Q8N8J0 262 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 RNF217Q8TC41 542 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 XAGE3Q8WTP9 111 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 DNAAF4Q8WXU2 420 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 CENPTQ96BT3 561 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 BORCS6Q96GS4 357 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 TMEM87BQ96K49 555 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 SCLT1Q96NL6 688 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 SLC4A9Q96Q91 983 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 SPAG5Q96R06 1193 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 FEZ1Q99689 392 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 DUSP9Q99956 384 aaKnown RBP4.12□□□□□ -1.75
SMG6-208ENST00000570874 HERPUD2Q9BSE4 406 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 C2orf49Q9BVC5 232 aaPredicted RBP4.12□□□□□ -1.75
SMG6-208ENST00000570874 XPO4Q9C0E2 1151 aaKnown RBP4.12□□□□□ -1.75
SMG6-208ENST00000570874 DCTPP1Q9H773 170 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 ANO2Q9NQ90 1003 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 CYLDQ9NQC7 956 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 CNTN3Q9P232 1028 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 EXOC6BQ9Y2D4 811 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 ATP8A1Q9Y2Q0 1164 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 SOS1Q07889 1333 aaPredicted RBP4.12□□□□□ -1.75
SMG6-208ENST00000570874 PLEKHG2Q9H7P9 1386 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 BCL9O00512 1426 aa4.12□□□□□ -1.75
SMG6-208ENST00000570874 DOCK2Q92608 1830 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 CCDC88AQ3V6T2 1871 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 CDK5RAP2Q96SN8 1893 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 MYH15Q9Y2K3 1946 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 SHTN1A0MZ66 631 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 USP17L3A6NCW0 530 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 USP17L4A6NCW7 530 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 ERICH4A6NGS2 130 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 ERVV-2B6SEH9 535 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 MPHOSPH10O00566 681 aaKnown RBP4.11□□□□□ -1.75
SMG6-208ENST00000570874 KIF3CO14782 793 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 SPTLC1O15269 473 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 MAP3K7O43318 606 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 PTCD1O75127 700 aaKnown RBP4.11□□□□□ -1.75
SMG6-208ENST00000570874 A1BGP04217 495 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 IGKV5-2P06315 115 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 LDHBP07195 334 aaKnown RBP4.11□□□□□ -1.75
SMG6-208ENST00000570874 SNRPA1P09661 255 aaKnown RBP4.11□□□□□ -1.75
SMG6-208ENST00000570874 NCAM1P13591 858 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 LMNB1P20700 586 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 OAS2P29728 719 aaKnown RBP4.11□□□□□ -1.75
SMG6-208ENST00000570874 CNGA1P29973 690 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 KIF5BP33176 963 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 SARSP49591 514 aaKnown RBP4.11□□□□□ -1.75
SMG6-208ENST00000570874 ARHGAP4P98171 946 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 INSM1Q01101 510 aaPredicted RBP4.11□□□□□ -1.75
SMG6-208ENST00000570874 FMR1Q06787 632 aaKnown RBP eCLIP4.11□□□□□ -1.75
SMG6-208ENST00000570874 SFSWAPQ12872 951 aaKnown RBP4.11□□□□□ -1.75
SMG6-208ENST00000570874 LRRC41Q15345 812 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 DDB1Q16531 1140 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 CRTC2Q53ET0 693 aaPredicted RBP4.11□□□□□ -1.75
SMG6-208ENST00000570874 ZNF394Q53GI3 561 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 CFAP161Q6P656 301 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 USP17L2Q6R6M4 530 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 TTLL7Q6ZT98 887 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 COPS6Q7L5N1 327 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 PTF1AQ7RTS3 328 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 USP17L1Q7RTZ2 530 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 METTL3Q86U44 580 aaKnown RBP4.11□□□□□ -1.75
SMG6-208ENST00000570874 CHD1LQ86WJ1 897 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 SNX32Q86XE0 403 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 DNAJC10Q8IXB1 793 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 IQCF2Q8IXL9 164 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 SAMD14Q8IZD0 417 aaPredicted RBP4.11□□□□□ -1.75
SMG6-208ENST00000570874 TTC5Q8N0Z6 440 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 ENAHQ8N8S7 591 aaPredicted RBP4.11□□□□□ -1.75
SMG6-208ENST00000570874 APPL2Q8NEU8 664 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 TTC8Q8TAM2 541 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 CERKQ8TCT0 537 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 PIGBQ92521 554 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 SYAP1Q96A49 352 aaPredicted RBP4.11□□□□□ -1.75
SMG6-208ENST00000570874 TBC1D31Q96DN5 1066 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 VMP1Q96GC9 406 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 ACSBG1Q96GR2 724 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 SUCLG2Q96I99 432 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 CDK5RAP3Q96JB5 506 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 DEPDC7Q96QD5 511 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 PHOX2BQ99453 314 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 MYD88Q99836 296 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 TRIM55Q9BYV6 548 aa4.11□□□□□ -1.75
SMG6-208ENST00000570874 GPHNQ9NQX3 736 aaPredicted RBP4.11□□□□□ -1.75
SMG6-208ENST00000570874 DDX21Q9NR30 783 aaKnown RBP eCLIP4.11□□□□□ -1.75
SMG6-208ENST00000570874 SH3GLB2Q9NR46 395 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms