RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 PPP4CP60510 307 aa12.86□□□□□ -0.35
CTDNEP1-202ENST00000570380 ADGRA1Q86SQ6 560 aa12.86□□□□□ -0.35
CTDNEP1-202ENST00000570380 ACER1Q8TDN7 264 aa12.86□□□□□ -0.35
CTDNEP1-202ENST00000570380 SSH1Q8WYL5 1049 aa12.86□□□□□ -0.35
CTDNEP1-202ENST00000570380 C1QTNF1Q9BXJ1 281 aa12.86□□□□□ -0.35
CTDNEP1-202ENST00000570380 MOV10L1Q9BXT6 1211 aaKnown RBP12.86□□□□□ -0.35
CTDNEP1-202ENST00000570380 KIAA1683Q9H0B3 1180 aa12.86□□□□□ -0.35
CTDNEP1-202ENST00000570380 TMEM39AQ9NV64 488 aa12.86□□□□□ -0.35
CTDNEP1-202ENST00000570380 LRP2BPQ9P2M1 347 aa12.86□□□□□ -0.35
CTDNEP1-202ENST00000570380 SAP30BPQ9UHR5 308 aaKnown RBP12.86□□□□□ -0.35
CTDNEP1-202ENST00000570380 PLCG2P16885 1265 aa12.85□□□□□ -0.35
CTDNEP1-202ENST00000570380 ARID4AP29374 1257 aaPredicted RBP12.85□□□□□ -0.35
CTDNEP1-202ENST00000570380 MCAMP43121 646 aa12.85□□□□□ -0.35
CTDNEP1-202ENST00000570380 FAAP100Q0VG06 881 aa12.85□□□□□ -0.35
CTDNEP1-202ENST00000570380 NAA16Q6N069 864 aaPredicted RBP12.85□□□□□ -0.35
CTDNEP1-202ENST00000570380 C16orf59Q7L2K0 433 aa12.85□□□□□ -0.35
CTDNEP1-202ENST00000570380 IL27Q8NEV9 243 aa12.85□□□□□ -0.35
CTDNEP1-202ENST00000570380 RPAP3Q9H6T3 665 aaPredicted RBP12.85□□□□□ -0.35
CTDNEP1-202ENST00000570380 A0A1W2PQ45 241 aaPredicted RBP12.84□□□□□ -0.35
CTDNEP1-202ENST00000570380 A0A1W2PQY0 241 aa12.84□□□□□ -0.35
CTDNEP1-202ENST00000570380 PGK1P00558 417 aa12.84□□□□□ -0.35
CTDNEP1-202ENST00000570380 BMP1P13497 986 aa12.84□□□□□ -0.35
CTDNEP1-202ENST00000570380 ERCC3P19447 782 aa12.84□□□□□ -0.35
CTDNEP1-202ENST00000570380 IGFBP4P22692 258 aa12.84□□□□□ -0.35
CTDNEP1-202ENST00000570380 RAB3GAP1Q15042 981 aa12.84□□□□□ -0.35
CTDNEP1-202ENST00000570380 RASIP1Q5U651 963 aa12.84□□□□□ -0.35
CTDNEP1-202ENST00000570380 TATDN1Q6P1N9 297 aa12.84□□□□□ -0.35
CTDNEP1-202ENST00000570380 CCDC129Q6ZRS4 1044 aa12.84□□□□□ -0.35
CTDNEP1-202ENST00000570380 ANKRD33Q7Z3H0 272 aa12.84□□□□□ -0.35
CTDNEP1-202ENST00000570380 SLC44A5Q8NCS7 719 aa12.84□□□□□ -0.35
CTDNEP1-202ENST00000570380 SHCBP1Q8NEM2 672 aa12.84□□□□□ -0.35
CTDNEP1-202ENST00000570380 XPNPEP3Q9NQH7 507 aa12.84□□□□□ -0.35
CTDNEP1-202ENST00000570380 ARIH1Q9Y4X5 557 aaPredicted RBP12.84□□□□□ -0.35
CTDNEP1-202ENST00000570380 TIMP1P01033 207 aa12.83□□□□□ -0.36
CTDNEP1-202ENST00000570380 HLA-DOAP06340 250 aa12.83□□□□□ -0.36
CTDNEP1-202ENST00000570380 TMEM240Q5SV17 173 aa12.83□□□□□ -0.36
CTDNEP1-202ENST00000570380 GORABQ5T7V8 394 aa12.83□□□□□ -0.36
CTDNEP1-202ENST00000570380 RNF180Q86T96 592 aa12.83□□□□□ -0.36
CTDNEP1-202ENST00000570380 MAML3Q96JK9 1138 aa12.83□□□□□ -0.36
CTDNEP1-202ENST00000570380 TOX2Q96NM4 488 aa12.83□□□□□ -0.36
CTDNEP1-202ENST00000570380 LRFN3Q9BTN0 628 aa12.83□□□□□ -0.36
CTDNEP1-202ENST00000570380 SPATC1LQ9H0A9 340 aa12.83□□□□□ -0.36
CTDNEP1-202ENST00000570380 MRS2Q9HD23 443 aa12.83□□□□□ -0.36
CTDNEP1-202ENST00000570380 RARBP10826 455 aa12.82□□□□□ -0.36
CTDNEP1-202ENST00000570380 DYNLL1P63167 89 aaKnown RBP12.82□□□□□ -0.36
CTDNEP1-202ENST00000570380 COG2Q14746 738 aa12.82□□□□□ -0.36
CTDNEP1-202ENST00000570380 MFSD5Q6N075 450 aa12.82□□□□□ -0.36
CTDNEP1-202ENST00000570380 ATF7IPQ6VMQ6 1270 aa12.82□□□□□ -0.36
CTDNEP1-202ENST00000570380 EPHX3Q9H6B9 360 aa12.82□□□□□ -0.36
CTDNEP1-202ENST00000570380 SNRKQ9NRH2 765 aa12.82□□□□□ -0.36
CTDNEP1-202ENST00000570380 SLC5A4Q9NY91 659 aa12.82□□□□□ -0.36
CTDNEP1-202ENST00000570380 HOXC10Q9NYD6 342 aa12.82□□□□□ -0.36
CTDNEP1-202ENST00000570380 CXXC1Q9P0U4 656 aaPredicted RBP12.82□□□□□ -0.36
CTDNEP1-202ENST00000570380 TBX21Q9UL17 535 aa12.82□□□□□ -0.36
CTDNEP1-202ENST00000570380 DCDC2CA8MYV0 355 aa12.81□□□□□ -0.36
CTDNEP1-202ENST00000570380 UQCRFS1P1P0C7P4 283 aa12.81□□□□□ -0.36
CTDNEP1-202ENST00000570380 GUCY1A2P33402 732 aa12.81□□□□□ -0.36
CTDNEP1-202ENST00000570380 TFF2Q03403 129 aa12.81□□□□□ -0.36
CTDNEP1-202ENST00000570380 ABCB5Q2M3G0 1257 aa12.81□□□□□ -0.36
CTDNEP1-202ENST00000570380 CERKLQ49MI3 558 aaPredicted RBP12.81□□□□□ -0.36
CTDNEP1-202ENST00000570380 SERPINB13Q9UIV8 391 aa12.81□□□□□ -0.36
CTDNEP1-202ENST00000570380 HCN4Q9Y3Q4 1203 aa12.81□□□□□ -0.36
CTDNEP1-202ENST00000570380 MYH8P13535 1937 aa12.81□□□□□ -0.36
CTDNEP1-202ENST00000570380 ADAMTS4O75173 837 aa12.8□□□□□ -0.36
CTDNEP1-202ENST00000570380 TAL1P17542 331 aaPredicted RBP12.8□□□□□ -0.36
CTDNEP1-202ENST00000570380 PPIGQ13427 754 aaKnown RBP eCLIP12.8□□□□□ -0.362e-6■■■□□ 18
CTDNEP1-202ENST00000570380 ZNF365Q70YC5 407 aa12.8□□□□□ -0.36
CTDNEP1-202ENST00000570380 NCAPG2Q86XI2 1143 aa12.8□□□□□ -0.36
CTDNEP1-202ENST00000570380 ABRAQ8N0Z2 381 aa12.8□□□□□ -0.36
CTDNEP1-202ENST00000570380 LENG1Q96BZ8 264 aaPredicted RBP12.8□□□□□ -0.36
CTDNEP1-202ENST00000570380 MEIS3Q99687 375 aa12.8□□□□□ -0.36
CTDNEP1-202ENST00000570380 MROH8Q9H579 483 aa12.8□□□□□ -0.36
CTDNEP1-202ENST00000570380 STARD7Q9NQZ5 370 aa12.8□□□□□ -0.36
CTDNEP1-202ENST00000570380 NRBP1Q9UHY1 535 aa12.8□□□□□ -0.36
CTDNEP1-202ENST00000570380 HDAC5Q9UQL6 1122 aa12.8□□□□□ -0.36
CTDNEP1-202ENST00000570380 ZNF521Q96K83 1311 aa12.8□□□□□ -0.36
CTDNEP1-202ENST00000570380 PRRC2BQ5JSZ5 2229 aaKnown RBP12.8□□□□□ -0.36
CTDNEP1-202ENST00000570380 MCM3APO60318 1980 aa12.8□□□□□ -0.36
CTDNEP1-202ENST00000570380 TRANK1O15050 2925 aa12.79□□□□□ -0.36
CTDNEP1-202ENST00000570380 MUC6Q6W4X9 2439 aa12.79□□□□□ -0.36
CTDNEP1-202ENST00000570380 PIEZO1Q92508 2521 aa12.79□□□□□ -0.36
CTDNEP1-202ENST00000570380 A0A1W2PRG0 241 aa12.79□□□□□ -0.36
CTDNEP1-202ENST00000570380 SRGAP3O43295 1099 aa12.79□□□□□ -0.36
CTDNEP1-202ENST00000570380 CYP2E1P05181 493 aaPredicted RBP12.79□□□□□ -0.36
CTDNEP1-202ENST00000570380 ZNF865P0CJ78 1059 aaPredicted RBP12.79□□□□□ -0.36
CTDNEP1-202ENST00000570380 ACRP10323 421 aa12.79□□□□□ -0.36
CTDNEP1-202ENST00000570380 CSF2RAP15509 400 aa12.79□□□□□ -0.36
CTDNEP1-202ENST00000570380 KCNQ1P51787 676 aa12.79□□□□□ -0.36
CTDNEP1-202ENST00000570380 ACLYP53396 1101 aa12.79□□□□□ -0.36
CTDNEP1-202ENST00000570380 PLS1Q14651 629 aa12.79□□□□□ -0.36
CTDNEP1-202ENST00000570380 RAB30Q15771 203 aa12.79□□□□□ -0.36
CTDNEP1-202ENST00000570380 TSEN34Q9BSV6 310 aaKnown RBP12.79□□□□□ -0.36
CTDNEP1-202ENST00000570380 TANGO6Q9C0B7 1094 aa12.79□□□□□ -0.36
CTDNEP1-202ENST00000570380 EHD4Q9H223 541 aa12.79□□□□□ -0.36
CTDNEP1-202ENST00000570380 TSPYL2Q9H2G4 693 aaPredicted RBP12.79□□□□□ -0.36
CTDNEP1-202ENST00000570380 NKX2-4Q9H2Z4 354 aa12.79□□□□□ -0.36
CTDNEP1-202ENST00000570380 CABP5Q9NP86 173 aa12.79□□□□□ -0.36
CTDNEP1-202ENST00000570380 MSRAQ9UJ68 235 aa12.79□□□□□ -0.36
CTDNEP1-202ENST00000570380 YBX2Q9Y2T7 364 aaKnown RBP12.79□□□□□ -0.36
CTDNEP1-202ENST00000570380 ROBO3Q96MS0 1386 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms