RNA–Protein interactions for RNA: ENST00000569945.1

GCOM1-213, Transcript of GRINL1A complex locus 1, humanhuman

Gene GCOM1, Length 2,335 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-213ENST00000569945 PHACTR2O75167 634 aa15.97■□□□□ 0.15
GCOM1-213ENST00000569945 ATP1A3P13637 1013 aa15.97■□□□□ 0.15
GCOM1-213ENST00000569945 MCAMP43121 646 aa15.97■□□□□ 0.15
GCOM1-213ENST00000569945 TTC39AQ5SRH9 613 aa15.97■□□□□ 0.15
GCOM1-213ENST00000569945 CC2D2BQ6DHV5 1058 aa15.97■□□□□ 0.15
GCOM1-213ENST00000569945 RTKN2Q8IZC4 609 aa15.97■□□□□ 0.15
GCOM1-213ENST00000569945 DPF2Q92785 391 aa15.97■□□□□ 0.15
GCOM1-213ENST00000569945 TCEANC2Q96MN5 208 aa15.97■□□□□ 0.15
GCOM1-213ENST00000569945 COL1A1P02452 1464 aaPredicted RBP15.97■□□□□ 0.15
GCOM1-213ENST00000569945 ARFGEF1Q9Y6D6 1849 aa15.96■□□□□ 0.15
GCOM1-213ENST00000569945 FER1L6Q2WGJ9 1857 aa15.96■□□□□ 0.15
GCOM1-213ENST00000569945 SLC27A2O14975 620 aa15.96■□□□□ 0.15
GCOM1-213ENST00000569945 SCP2P22307 547 aa15.96■□□□□ 0.15
GCOM1-213ENST00000569945 HIBADHP31937 336 aaKnown RBP15.96■□□□□ 0.15
GCOM1-213ENST00000569945 AARSP49588 968 aaKnown RBP eCLIP15.96■□□□□ 0.15
GCOM1-213ENST00000569945 GOLGA8FQ08AF8 430 aa15.96■□□□□ 0.15
GCOM1-213ENST00000569945 GOLGA8DPQ0D2H9 430 aa15.96■□□□□ 0.15
GCOM1-213ENST00000569945 NBPF20Q3BBV1 942 aa15.96■□□□□ 0.15
GCOM1-213ENST00000569945 VSTM4Q8IW00 320 aa15.96■□□□□ 0.15
GCOM1-213ENST00000569945 CCDC102AQ96A19 550 aa15.96■□□□□ 0.15
GCOM1-213ENST00000569945 DBNDD1Q9H9R9 158 aa15.96■□□□□ 0.15
GCOM1-213ENST00000569945 GNL3LQ9NVN8 582 aaKnown RBP15.96■□□□□ 0.15
GCOM1-213ENST00000569945 LRRIQ3A6PVS8 624 aaPredicted RBP15.96■□□□□ 0.15
GCOM1-213ENST00000569945 IKBKBO14920 756 aa15.96■□□□□ 0.15
GCOM1-213ENST00000569945 SYF2O95926 243 aaKnown RBP15.96■□□□□ 0.15
GCOM1-213ENST00000569945 FKBP4Q02790 459 aaKnown RBP eCLIP15.96■□□□□ 0.15
GCOM1-213ENST00000569945 RASGRF1Q13972 1273 aa15.96■□□□□ 0.15
GCOM1-213ENST00000569945 LRCH2Q5VUJ6 765 aa15.96■□□□□ 0.15
GCOM1-213ENST00000569945 ARHGAP27Q6ZUM4 889 aa15.96■□□□□ 0.15
GCOM1-213ENST00000569945 PRPF38AQ8NAV1 312 aaKnown RBP15.96■□□□□ 0.15
GCOM1-213ENST00000569945 USP28Q96RU2 1077 aa15.96■□□□□ 0.15
GCOM1-213ENST00000569945 ZC3H12CQ9C0D7 883 aaKnown RBP15.96■□□□□ 0.15
GCOM1-213ENST00000569945 ZSWIM4Q9H7M6 989 aa15.96■□□□□ 0.15
GCOM1-213ENST00000569945 FAM169AQ9Y6X4 670 aa15.96■□□□□ 0.15
GCOM1-213ENST00000569945 MED23Q9ULK4 1368 aa15.96■□□□□ 0.14
GCOM1-213ENST00000569945 CHD4Q14839 1912 aa15.96■□□□□ 0.14
GCOM1-213ENST00000569945 LMOD1P29536 600 aaPredicted RBP15.95■□□□□ 0.14
GCOM1-213ENST00000569945 VSNL1P62760 191 aa15.95■□□□□ 0.14
GCOM1-213ENST00000569945 STK3Q13188 491 aa15.95■□□□□ 0.14
GCOM1-213ENST00000569945 C11orf91Q3C1V1 193 aa15.95■□□□□ 0.14
GCOM1-213ENST00000569945 BLOC1S2Q6QNY1 142 aa15.95■□□□□ 0.14
GCOM1-213ENST00000569945 VPS37DQ86XT2 251 aa15.95■□□□□ 0.14
GCOM1-213ENST00000569945 AFAP1L1Q8TED9 768 aa15.95■□□□□ 0.14
GCOM1-213ENST00000569945 PSMD1Q99460 953 aa15.95■□□□□ 0.14
GCOM1-213ENST00000569945 PPIP5K2O43314 1243 aa15.95■□□□□ 0.14
GCOM1-213ENST00000569945 RNF40O75150 1001 aa15.95■□□□□ 0.14
GCOM1-213ENST00000569945 WDHD1O75717 1129 aaPredicted RBP15.95■□□□□ 0.14
GCOM1-213ENST00000569945 ATP5JP18859 108 aa15.95■□□□□ 0.14
GCOM1-213ENST00000569945 NLRP12P59046 1061 aa15.95■□□□□ 0.14
GCOM1-213ENST00000569945 CAVIN4Q5BKX8 364 aa15.95■□□□□ 0.14
GCOM1-213ENST00000569945 ISM2Q6H9L7 571 aa15.95■□□□□ 0.14
GCOM1-213ENST00000569945 CPLX2Q6PUV4 134 aaKnown RBP15.95■□□□□ 0.14
GCOM1-213ENST00000569945 C15orf52Q6ZUT6 534 aaKnown RBP15.95■□□□□ 0.14
GCOM1-213ENST00000569945 TOGARAM2Q6ZUX3 1019 aa15.95■□□□□ 0.14
GCOM1-213ENST00000569945 RNF217Q8TC41 542 aa15.95■□□□□ 0.14
GCOM1-213ENST00000569945 MIEF2Q96C03 454 aa15.95■□□□□ 0.14
GCOM1-213ENST00000569945 FAXDC2Q96IV6 333 aa15.95■□□□□ 0.14
GCOM1-213ENST00000569945 TAOK3Q9H2K8 898 aa15.95■□□□□ 0.14
GCOM1-213ENST00000569945 CD209Q9NNX6 404 aa15.95■□□□□ 0.14
GCOM1-213ENST00000569945 HMG20BQ9P0W2 317 aa15.95■□□□□ 0.14
GCOM1-213ENST00000569945 H3BQV1 296 aa15.94■□□□□ 0.14
GCOM1-213ENST00000569945 CHGBP05060 677 aa15.94■□□□□ 0.14
GCOM1-213ENST00000569945 ARID4AP29374 1257 aaPredicted RBP15.94■□□□□ 0.14
GCOM1-213ENST00000569945 ZAP70P43403 619 aa15.94■□□□□ 0.14
GCOM1-213ENST00000569945 PPP2R5AQ15172 486 aa15.94■□□□□ 0.14
GCOM1-213ENST00000569945 IFFO2Q5TF58 517 aa15.94■□□□□ 0.14
GCOM1-213ENST00000569945 CEP112Q8N8E3 955 aa15.94■□□□□ 0.14
GCOM1-213ENST00000569945 TBC1D22AQ8WUA7 517 aa15.94■□□□□ 0.14
GCOM1-213ENST00000569945 AKAP11Q9UKA4 1901 aa15.94■□□□□ 0.14
GCOM1-213ENST00000569945 TAF6LQ9Y6J9 622 aa15.94■□□□□ 0.14
GCOM1-213ENST00000569945 GLRX3O76003 335 aaKnown RBP15.94■□□□□ 0.14
GCOM1-213ENST00000569945 TUBB4BP68371 445 aa15.94■□□□□ 0.14
GCOM1-213ENST00000569945 SCRN1Q12765 414 aa15.94■□□□□ 0.14
GCOM1-213ENST00000569945 SOGA3Q5TF21 947 aa15.94■□□□□ 0.14
GCOM1-213ENST00000569945 ATL3Q6DD88 541 aa15.94■□□□□ 0.14
GCOM1-213ENST00000569945 CCDC12Q8WUD4 166 aaPredicted RBP15.94■□□□□ 0.14
GCOM1-213ENST00000569945 SDF4Q9BRK5 362 aa15.94■□□□□ 0.14
GCOM1-213ENST00000569945 VIPAS39Q9H9C1 493 aa15.94■□□□□ 0.14
GCOM1-213ENST00000569945 CDC23Q9UJX2 597 aa15.94■□□□□ 0.14
GCOM1-213ENST00000569945 UBASH3AP57075 661 aa15.93■□□□□ 0.14
GCOM1-213ENST00000569945 TBX2Q13207 712 aaPredicted RBP15.93■□□□□ 0.14
GCOM1-213ENST00000569945 GBP6Q6ZN66 633 aa15.93■□□□□ 0.14
GCOM1-213ENST00000569945 MRPS27Q92552 414 aaKnown RBP15.93■□□□□ 0.14
GCOM1-213ENST00000569945 EYA3Q99504 573 aa15.93■□□□□ 0.14
GCOM1-213ENST00000569945 PUF60Q9UHX1 559 aaKnown RBP15.93■□□□□ 0.14
GCOM1-213ENST00000569945 MCM8Q9UJA3 840 aa15.93■□□□□ 0.14
GCOM1-213ENST00000569945 ZC3H4Q9UPT8 1303 aaKnown RBP15.93■□□□□ 0.14
GCOM1-213ENST00000569945 YDJCA8MPS7 323 aa15.93■□□□□ 0.14
GCOM1-213ENST00000569945 GOLIM4O00461 696 aa15.93■□□□□ 0.14
GCOM1-213ENST00000569945 STX10O60499 249 aa15.93■□□□□ 0.14
GCOM1-213ENST00000569945 GPR162Q16538 588 aa15.93■□□□□ 0.14
GCOM1-213ENST00000569945 NAA16Q6N069 864 aaPredicted RBP15.93■□□□□ 0.14
GCOM1-213ENST00000569945 POTEDQ86YR6 584 aa15.93■□□□□ 0.14
GCOM1-213ENST00000569945 GPATCH3Q96I76 525 aa15.93■□□□□ 0.14
GCOM1-213ENST00000569945 BAG1Q99933 345 aaPredicted RBP15.93■□□□□ 0.14
GCOM1-213ENST00000569945 JPH2Q9BR39 696 aaPredicted RBP15.93■□□□□ 0.14
GCOM1-213ENST00000569945 MXD3Q9BW11 206 aa15.93■□□□□ 0.14
GCOM1-213ENST00000569945 GBP3Q9H0R5 595 aa15.93■□□□□ 0.14
GCOM1-213ENST00000569945 ACBD3Q9H3P7 528 aa15.93■□□□□ 0.14
GCOM1-213ENST00000569945 TMEM232C9JQI7 657 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms