RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 TRIM75PA6NK02 468 aa14.43□□□□□ -0.1
NUP93-220ENST00000569842 RAD21O60216 631 aa14.43□□□□□ -0.1
NUP93-220ENST00000569842 RXRAP19793 462 aa14.43□□□□□ -0.1
NUP93-220ENST00000569842 MCM2P49736 904 aa14.43□□□□□ -0.1
NUP93-220ENST00000569842 ZYXQ15942 572 aaKnown RBP14.43□□□□□ -0.1
NUP93-220ENST00000569842 NUP133Q8WUM0 1156 aa14.43□□□□□ -0.1
NUP93-220ENST00000569842 SNX21Q969T3 373 aa14.43□□□□□ -0.1
NUP93-220ENST00000569842 SPDYE5A6NIY4 337 aa14.42□□□□□ -0.1
NUP93-220ENST00000569842 TMEM88BA6NKF7 163 aa14.42□□□□□ -0.1
NUP93-220ENST00000569842 GOLGA8BA8MQT2 603 aa14.42□□□□□ -0.1
NUP93-220ENST00000569842 PDIA3P30101 505 aaKnown RBP14.42□□□□□ -0.1
NUP93-220ENST00000569842 PPATQ06203 517 aa14.42□□□□□ -0.1
NUP93-220ENST00000569842 STK3Q13188 491 aa14.42□□□□□ -0.1
NUP93-220ENST00000569842 SAPCD2Q86UD0 394 aa14.42□□□□□ -0.1
NUP93-220ENST00000569842 MICU3Q86XE3 530 aa14.42□□□□□ -0.1
NUP93-220ENST00000569842 OPTNQ96CV9 577 aa14.42□□□□□ -0.1
NUP93-220ENST00000569842 SH2D4AQ9H788 454 aa14.42□□□□□ -0.1
NUP93-220ENST00000569842 AFG3L2Q9Y4W6 797 aa14.42□□□□□ -0.1
NUP93-220ENST00000569842 USP17L10C9JJH3 530 aa14.42□□□□□ -0.1
NUP93-220ENST00000569842 ZBTB43O43298 467 aa14.42□□□□□ -0.1
NUP93-220ENST00000569842 LARGE1O95461 756 aa14.42□□□□□ -0.1
NUP93-220ENST00000569842 TROAPQ12815 778 aa14.42□□□□□ -0.1
NUP93-220ENST00000569842 MTMR2Q13614 643 aa14.42□□□□□ -0.1
NUP93-220ENST00000569842 ME3Q16798 604 aa14.42□□□□□ -0.1
NUP93-220ENST00000569842 ZNF274Q96GC6 653 aaPredicted RBP14.42□□□□□ -0.1
NUP93-220ENST00000569842 TBC1D2Q9BYX2 928 aa14.42□□□□□ -0.1
NUP93-220ENST00000569842 F5H6K3 240 aa14.42□□□□□ -0.1
NUP93-220ENST00000569842 KLRC3Q07444 240 aa14.42□□□□□ -0.1
NUP93-220ENST00000569842 RASGRP2Q7LDG7 609 aa14.42□□□□□ -0.1
NUP93-220ENST00000569842 CCDC144CPQ8IYA2 1237 aa14.42□□□□□ -0.1
NUP93-220ENST00000569842 KIAA1683Q9H0B3 1180 aa14.42□□□□□ -0.1
NUP93-220ENST00000569842 HPS5Q9UPZ3 1129 aa14.42□□□□□ -0.1
NUP93-220ENST00000569842 IRF6O14896 467 aa14.41□□□□□ -0.1
NUP93-220ENST00000569842 DDAH1O94760 285 aa14.41□□□□□ -0.1
NUP93-220ENST00000569842 ANP32AP39687 249 aaKnown RBP14.41□□□□□ -0.1
NUP93-220ENST00000569842 HSCBQ8IWL3 235 aa14.41□□□□□ -0.1
NUP93-220ENST00000569842 GOPCQ9HD26 462 aa14.41□□□□□ -0.1
NUP93-220ENST00000569842 ABT1Q9ULW3 272 aaKnown RBP14.41□□□□□ -0.1
NUP93-220ENST00000569842 SYNPO2Q9UMS6 1093 aa14.41□□□□□ -0.1
NUP93-220ENST00000569842 TLL2Q9Y6L7 1015 aa14.41□□□□□ -0.1
NUP93-220ENST00000569842 BACE1P56817 501 aa14.41□□□□□ -0.1
NUP93-220ENST00000569842 CCT2P78371 535 aaKnown RBP14.41□□□□□ -0.1
NUP93-220ENST00000569842 PPIL2Q13356 520 aa14.41□□□□□ -0.1
NUP93-220ENST00000569842 SPICE1Q8N0Z3 855 aa14.41□□□□□ -0.1
NUP93-220ENST00000569842 TMX3Q96JJ7 454 aa14.41□□□□□ -0.1
NUP93-220ENST00000569842 VCPKMTQ9H867 229 aa14.41□□□□□ -0.1
NUP93-220ENST00000569842 GOLGA8AA7E2F4 631 aa14.4□□□□□ -0.1
NUP93-220ENST00000569842 NDUFB10O96000 172 aa14.4□□□□□ -0.1
NUP93-220ENST00000569842 GJA5P36382 358 aa14.4□□□□□ -0.1
NUP93-220ENST00000569842 METAP2P50579 478 aaKnown RBP eCLIP14.4□□□□□ -0.1
NUP93-220ENST00000569842 DGKZQ13574 1117 aa14.4□□□□□ -0.1
NUP93-220ENST00000569842 KIAA1755Q5JYT7 1200 aa14.4□□□□□ -0.1
NUP93-220ENST00000569842 SLFN13Q68D06 897 aa14.4□□□□□ -0.1
NUP93-220ENST00000569842 NECAB1Q8N987 351 aa14.4□□□□□ -0.1
NUP93-220ENST00000569842 GMCL1P1Q8NEA9 526 aa14.4□□□□□ -0.1
NUP93-220ENST00000569842 ZSCAN31Q96LW9 406 aaPredicted RBP14.4□□□□□ -0.1
NUP93-220ENST00000569842 SLKQ9H2G2 1235 aaPredicted RBP14.4□□□□□ -0.1
NUP93-220ENST00000569842 CALM1P0DP23 149 aa14.4□□□□□ -0.1
NUP93-220ENST00000569842 CALM2P0DP24 149 aa14.4□□□□□ -0.1
NUP93-220ENST00000569842 CALM3P0DP25 149 aa14.4□□□□□ -0.1
NUP93-220ENST00000569842 HMGCS2P54868 508 aa14.4□□□□□ -0.1
NUP93-220ENST00000569842 NCOA5Q9HCD5 579 aaKnown RBP14.4□□□□□ -0.1
NUP93-220ENST00000569842 MYH4Q9Y623 1939 aa14.4□□□□□ -0.1
NUP93-220ENST00000569842 K7ELQ4 463 aaPredicted RBP14.39□□□□□ -0.11
NUP93-220ENST00000569842 PFKFB2O60825 505 aa14.39□□□□□ -0.11
NUP93-220ENST00000569842 PDHBP11177 359 aa14.39□□□□□ -0.11
NUP93-220ENST00000569842 ZNF157P51786 506 aaPredicted RBP14.39□□□□□ -0.11
NUP93-220ENST00000569842 USP14P54578 494 aa14.39□□□□□ -0.11
NUP93-220ENST00000569842 USP17L2Q6R6M4 530 aa14.39□□□□□ -0.11
NUP93-220ENST00000569842 FANCBQ8NB91 859 aa14.39□□□□□ -0.11
NUP93-220ENST00000569842 WNK4Q96J92 1243 aa14.39□□□□□ -0.11
NUP93-220ENST00000569842 SH2B1Q9NRF2 756 aaPredicted RBP14.39□□□□□ -0.11
NUP93-220ENST00000569842 EMILIN3Q9NT22 766 aa14.39□□□□□ -0.11
NUP93-220ENST00000569842 C19orf81C9J6K1 198 aa14.39□□□□□ -0.11
NUP93-220ENST00000569842 RCAN1P53805 252 aa14.39□□□□□ -0.11
NUP93-220ENST00000569842 MKRN3Q13064 507 aaKnown RBP14.39□□□□□ -0.11
NUP93-220ENST00000569842 NUP88Q99567 741 aaPredicted RBP14.39□□□□□ -0.11
NUP93-220ENST00000569842 ISY1Q9ULR0 285 aaKnown RBP14.39□□□□□ -0.11
NUP93-220ENST00000569842 PHIPQ8WWQ0 1821 aa14.38□□□□□ -0.11
NUP93-220ENST00000569842 CXCL11O14625 94 aa14.38□□□□□ -0.11
NUP93-220ENST00000569842 GOLGA8HP0CJ92 632 aa14.38□□□□□ -0.11
NUP93-220ENST00000569842 SNHG28P0DPA3 235 aa14.38□□□□□ -0.11
NUP93-220ENST00000569842 SLC1A4P43007 532 aa14.38□□□□□ -0.11
NUP93-220ENST00000569842 APLP1P51693 650 aa14.38□□□□□ -0.11
NUP93-220ENST00000569842 SCRN1Q12765 414 aa14.38□□□□□ -0.11
NUP93-220ENST00000569842 GRM4Q14833 912 aa14.38□□□□□ -0.11
NUP93-220ENST00000569842 RTN1Q16799 776 aa14.38□□□□□ -0.11
NUP93-220ENST00000569842 RGMBQ6NW40 437 aa14.38□□□□□ -0.11
NUP93-220ENST00000569842 CTCFLQ8NI51 663 aaPredicted RBP14.38□□□□□ -0.11
NUP93-220ENST00000569842 KCNH4Q9UQ05 1017 aa14.38□□□□□ -0.11
NUP93-220ENST00000569842 FRMPD2Q68DX3 1309 aaPredicted RBP14.38□□□□□ -0.11
NUP93-220ENST00000569842 PARP1P09874 1014 aaKnown RBP14.38□□□□□ -0.11
NUP93-220ENST00000569842 CDC27P30260 824 aa14.38□□□□□ -0.11
NUP93-220ENST00000569842 CCDC96Q2M329 555 aa14.38□□□□□ -0.11
NUP93-220ENST00000569842 KCTD1Q719H9 257 aa14.38□□□□□ -0.11
NUP93-220ENST00000569842 DCAF4Q8WV16 495 aa14.38□□□□□ -0.11
NUP93-220ENST00000569842 GMCL1Q96IK5 515 aa14.38□□□□□ -0.11
NUP93-220ENST00000569842 MAP3K14Q99558 947 aa14.38□□□□□ -0.11
NUP93-220ENST00000569842 FAM217BQ9NTX9 383 aaPredicted RBP14.38□□□□□ -0.11
NUP93-220ENST00000569842 MAD2L2Q9UI95 211 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms