RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 PANK1Q8TE04 598 aa14.68□□□□□ -0.06
CAPN3-220ENST00000569827 GTF3C2Q8WUA4 911 aaPredicted RBP14.68□□□□□ -0.06
CAPN3-220ENST00000569827 DDX20Q9UHI6 824 aaKnown RBP14.68□□□□□ -0.06
CAPN3-220ENST00000569827 MAGEB6P1A0A0J9YX57 407 aa14.67□□□□□ -0.06
CAPN3-220ENST00000569827 SLC15A5A6NIM6 579 aa14.67□□□□□ -0.06
CAPN3-220ENST00000569827 USP14P54578 494 aa14.67□□□□□ -0.06
CAPN3-220ENST00000569827 ATP2B2Q01814 1243 aa14.67□□□□□ -0.06
CAPN3-220ENST00000569827 GRB14Q14449 540 aa14.67□□□□□ -0.06
CAPN3-220ENST00000569827 TTC6Q86TZ1 520 aa14.67□□□□□ -0.06
CAPN3-220ENST00000569827 DYNLL2Q96FJ2 89 aa14.67□□□□□ -0.06
CAPN3-220ENST00000569827 DNAJC2Q99543 621 aaKnown RBP14.67□□□□□ -0.06
CAPN3-220ENST00000569827 TANGO6Q9C0B7 1094 aa14.67□□□□□ -0.06
CAPN3-220ENST00000569827 CABP5Q9NP86 173 aa14.67□□□□□ -0.06
CAPN3-220ENST00000569827 MCM9Q9NXL9 1143 aa14.67□□□□□ -0.06
CAPN3-220ENST00000569827 IVNS1ABPQ9Y6Y0 642 aa14.67□□□□□ -0.06
CAPN3-220ENST00000569827 GLRX3O76003 335 aaKnown RBP14.66□□□□□ -0.06
CAPN3-220ENST00000569827 CHGBP05060 677 aa14.66□□□□□ -0.06
CAPN3-220ENST00000569827 PDE6AP16499 860 aa14.66□□□□□ -0.06
CAPN3-220ENST00000569827 RTP1P59025 263 aa14.66□□□□□ -0.06
CAPN3-220ENST00000569827 HNRNPUQ00839 825 aaKnown RBP eCLIP14.66□□□□□ -0.06
CAPN3-220ENST00000569827 PRAMEF19Q5SWL8 479 aa14.66□□□□□ -0.06
CAPN3-220ENST00000569827 LCORLQ8N3X6 602 aa14.66□□□□□ -0.06
CAPN3-220ENST00000569827 MOV10L1Q9BXT6 1211 aaKnown RBP14.66□□□□□ -0.06
CAPN3-220ENST00000569827 ATP11BQ9Y2G3 1177 aa14.66□□□□□ -0.06
CAPN3-220ENST00000569827 ZNF532Q9HCE3 1301 aa14.66□□□□□ -0.06
CAPN3-220ENST00000569827 CYP2D7A0A087X1C5 515 aa14.65□□□□□ -0.06
CAPN3-220ENST00000569827 GOLIM4O00461 696 aa14.65□□□□□ -0.06
CAPN3-220ENST00000569827 CYBAP13498 195 aa14.65□□□□□ -0.06
CAPN3-220ENST00000569827 ADORA2AP29274 412 aa14.65□□□□□ -0.06
CAPN3-220ENST00000569827 GABPAQ06546 454 aa14.65□□□□□ -0.06
CAPN3-220ENST00000569827 PLS1Q14651 629 aa14.65□□□□□ -0.06
CAPN3-220ENST00000569827 SLC9C2Q5TAH2 1124 aa14.65□□□□□ -0.06
CAPN3-220ENST00000569827 SPICE1Q8N0Z3 855 aa14.65□□□□□ -0.06
CAPN3-220ENST00000569827 GUCD1Q96NT3 240 aa14.65□□□□□ -0.06
CAPN3-220ENST00000569827 ARMT1Q9H993 441 aa14.65□□□□□ -0.06
CAPN3-220ENST00000569827 STXBP5LQ9Y2K9 1186 aa14.65□□□□□ -0.06
CAPN3-220ENST00000569827 PRKAB2O43741 272 aa14.64□□□□□ -0.07
CAPN3-220ENST00000569827 COBLO75128 1261 aa14.64□□□□□ -0.07
CAPN3-220ENST00000569827 ERCC3P19447 782 aa14.64□□□□□ -0.07
CAPN3-220ENST00000569827 GPR153Q6NV75 609 aa14.64□□□□□ -0.07
CAPN3-220ENST00000569827 LBX2Q6XYB7 198 aa14.64□□□□□ -0.07
CAPN3-220ENST00000569827 DPP9Q86TI2 863 aa14.64□□□□□ -0.07
CAPN3-220ENST00000569827 LPAR1Q92633 364 aa14.64□□□□□ -0.07
CAPN3-220ENST00000569827 ATG4CQ96DT6 458 aa14.64□□□□□ -0.07
CAPN3-220ENST00000569827 LBHD1Q9BQE6 289 aaPredicted RBP14.64□□□□□ -0.07
CAPN3-220ENST00000569827 CRNKL1Q9BZJ0 848 aaKnown RBP14.64□□□□□ -0.07
CAPN3-220ENST00000569827 SPATC1LQ9H0A9 340 aa14.64□□□□□ -0.07
CAPN3-220ENST00000569827 PRDM5Q9NQX1 630 aaPredicted RBP14.64□□□□□ -0.07
CAPN3-220ENST00000569827 GREB1LQ9C091 1923 aaPredicted RBP14.64□□□□□ -0.07
CAPN3-220ENST00000569827 TCRBV5S4A2TA0A5A2 114 aa14.63□□□□□ -0.07
CAPN3-220ENST00000569827 DNM1LO00429 736 aa14.63□□□□□ -0.07
CAPN3-220ENST00000569827 HOXC6P09630 235 aa14.63□□□□□ -0.07
CAPN3-220ENST00000569827 AKR1B1P15121 316 aa14.63□□□□□ -0.07
CAPN3-220ENST00000569827 NCAPG2Q86XI2 1143 aa14.63□□□□□ -0.07
CAPN3-220ENST00000569827 RHPN1Q8TCX5 695 aa14.63□□□□□ -0.07
CAPN3-220ENST00000569827 FERMT2Q96AC1 680 aa14.63□□□□□ -0.07
CAPN3-220ENST00000569827 DCP1AQ9NPI6 582 aaPredicted RBP14.63□□□□□ -0.07
CAPN3-220ENST00000569827 TRIM60Q495X7 471 aa14.62□□□□□ -0.07
CAPN3-220ENST00000569827 C9orf50Q5SZB4 431 aa14.62□□□□□ -0.07
CAPN3-220ENST00000569827 CERS3Q8IU89 383 aa14.62□□□□□ -0.07
CAPN3-220ENST00000569827 GBF1Q92538 1859 aa14.61□□□□□ -0.07
CAPN3-220ENST00000569827 FLOT1O75955 427 aa14.61□□□□□ -0.07
CAPN3-220ENST00000569827 MBD4O95243 580 aa14.61□□□□□ -0.07
CAPN3-220ENST00000569827 IGHA2P01877 340 aa14.61□□□□□ -0.07
CAPN3-220ENST00000569827 COG2Q14746 738 aa14.61□□□□□ -0.07
CAPN3-220ENST00000569827 FAM47AQ5JRC9 791 aa14.61□□□□□ -0.07
CAPN3-220ENST00000569827 SH3RF1Q7Z6J0 888 aa14.61□□□□□ -0.07
CAPN3-220ENST00000569827 ERC1Q8IUD2 1116 aa14.61□□□□□ -0.07
CAPN3-220ENST00000569827 SIAH1Q8IUQ4 282 aa14.61□□□□□ -0.07
CAPN3-220ENST00000569827 LENG1Q96BZ8 264 aaPredicted RBP14.61□□□□□ -0.07
CAPN3-220ENST00000569827 FBXO28Q9NVF7 368 aa14.61□□□□□ -0.07
CAPN3-220ENST00000569827 MSCO60682 206 aa14.6□□□□□ -0.07
CAPN3-220ENST00000569827 DSG3P32926 999 aa14.6□□□□□ -0.07
CAPN3-220ENST00000569827 ADCYAP1R1P41586 468 aa14.6□□□□□ -0.07
CAPN3-220ENST00000569827 ICA1Q05084 483 aa14.6□□□□□ -0.07
CAPN3-220ENST00000569827 SHHQ15465 462 aa14.6□□□□□ -0.07
CAPN3-220ENST00000569827 BADQ92934 168 aa14.6□□□□□ -0.07
CAPN3-220ENST00000569827 BOLA2Q9H3K6 86 aa14.6□□□□□ -0.07
CAPN3-220ENST00000569827 PRKAG2Q9UGJ0 569 aa14.6□□□□□ -0.07
CAPN3-220ENST00000569827 KBTBD13C9JR72 458 aa14.59□□□□□ -0.07
CAPN3-220ENST00000569827 POTEB2H3BUK9 544 aa14.59□□□□□ -0.07
CAPN3-220ENST00000569827 RAD21O60216 631 aa14.59□□□□□ -0.07
CAPN3-220ENST00000569827 IGSF3O75054 1194 aa14.59□□□□□ -0.07
CAPN3-220ENST00000569827 PGK2P07205 417 aa14.59□□□□□ -0.07
CAPN3-220ENST00000569827 TTF1Q15361 905 aaPredicted RBP14.59□□□□□ -0.07
CAPN3-220ENST00000569827 OLFML2BQ68BL8 750 aa14.59□□□□□ -0.07
CAPN3-220ENST00000569827 SLC39A5Q6ZMH5 540 aa14.59□□□□□ -0.07
CAPN3-220ENST00000569827 TMEM179Q6ZVK1 233 aa14.59□□□□□ -0.07
CAPN3-220ENST00000569827 STK11IPQ8N1F8 1099 aa14.59□□□□□ -0.07
CAPN3-220ENST00000569827 MAML3Q96JK9 1138 aa14.59□□□□□ -0.07
CAPN3-220ENST00000569827 COL25A1Q9BXS0 654 aaPredicted RBP14.59□□□□□ -0.07
CAPN3-220ENST00000569827 HOXC10Q9NYD6 342 aa14.59□□□□□ -0.07
CAPN3-220ENST00000569827 SPTBN5Q9NRC6 3674 aaKnown RBP14.59□□□□□ -0.07
CAPN3-220ENST00000569827 SEPT4O43236 478 aa14.58□□□□□ -0.08
CAPN3-220ENST00000569827 IFIT2P09913 472 aaKnown RBP14.58□□□□□ -0.08
CAPN3-220ENST00000569827 TAL1P17542 331 aaPredicted RBP14.58□□□□□ -0.08
CAPN3-220ENST00000569827 TMEM132BQ14DG7 1078 aa14.58□□□□□ -0.08
CAPN3-220ENST00000569827 LRRC41Q15345 812 aa14.58□□□□□ -0.08
CAPN3-220ENST00000569827 SIRT2Q8IXJ6 389 aa14.58□□□□□ -0.08
CAPN3-220ENST00000569827 ARRDC4Q8NCT1 418 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms