RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 CAPN15O75808 1086 aa13.16□□□□□ -0.3
SHCBP1-207ENST00000569702 FMNL1O95466 1100 aaPredicted RBP13.16□□□□□ -0.3
SHCBP1-207ENST00000569702 FCGRTP55899 365 aa13.16□□□□□ -0.3
SHCBP1-207ENST00000569702 MKL1Q969V6 931 aa13.16□□□□□ -0.3
SHCBP1-207ENST00000569702 IL25Q9H293 177 aa13.16□□□□□ -0.3
SHCBP1-207ENST00000569702 TXNRD2Q9NNW7 524 aa13.16□□□□□ -0.3
SHCBP1-207ENST00000569702 INCENPQ9NQS7 918 aa13.16□□□□□ -0.3
SHCBP1-207ENST00000569702 MTMR4Q9NYA4 1195 aa13.16□□□□□ -0.3
SHCBP1-207ENST00000569702 ORC4O43929 436 aa13.15□□□□□ -0.3
SHCBP1-207ENST00000569702 ECM2O94769 699 aaPredicted RBP13.15□□□□□ -0.3
SHCBP1-207ENST00000569702 CHMLP26374 656 aa13.15□□□□□ -0.3
SHCBP1-207ENST00000569702 HOXD10P28358 340 aa13.15□□□□□ -0.3
SHCBP1-207ENST00000569702 TFAP4Q01664 338 aa13.15□□□□□ -0.3
SHCBP1-207ENST00000569702 ATP2B2Q01814 1243 aa13.15□□□□□ -0.3
SHCBP1-207ENST00000569702 FAM47AQ5JRC9 791 aa13.15□□□□□ -0.3
SHCBP1-207ENST00000569702 GPRC5AQ8NFJ5 357 aa13.15□□□□□ -0.3
SHCBP1-207ENST00000569702 CEP95Q96GE4 821 aa13.15□□□□□ -0.3
SHCBP1-207ENST00000569702 CCDC136Q96JN2 1154 aa13.15□□□□□ -0.3
SHCBP1-207ENST00000569702 DSCC1Q9BVC3 393 aa13.15□□□□□ -0.3
SHCBP1-207ENST00000569702 NBPF3Q9H094 633 aa13.15□□□□□ -0.3
SHCBP1-207ENST00000569702 SYNPO2Q9UMS6 1093 aa13.15□□□□□ -0.3
SHCBP1-207ENST00000569702 PTCH2Q9Y6C5 1203 aa13.15□□□□□ -0.3
SHCBP1-207ENST00000569702 MGAMO43451 1857 aa13.14□□□□□ -0.31
SHCBP1-207ENST00000569702 SPDYE16A6NNV3 312 aaPredicted RBP13.14□□□□□ -0.31
SHCBP1-207ENST00000569702 WDR46O15213 610 aaKnown RBP13.14□□□□□ -0.31
SHCBP1-207ENST00000569702 PEX10O60683 326 aa13.14□□□□□ -0.31
SHCBP1-207ENST00000569702 CNMDO75829 334 aa13.14□□□□□ -0.31
SHCBP1-207ENST00000569702 NEFLP07196 543 aa13.14□□□□□ -0.31
SHCBP1-207ENST00000569702 TSPY3P0CV98 308 aa13.14□□□□□ -0.31
SHCBP1-207ENST00000569702 TSPY8P0CW00 308 aa13.14□□□□□ -0.31
SHCBP1-207ENST00000569702 ERVK-9P63128 1117 aa13.14□□□□□ -0.31
SHCBP1-207ENST00000569702 ERVK-24P63145 666 aa13.14□□□□□ -0.31
SHCBP1-207ENST00000569702 COG2Q14746 738 aa13.14□□□□□ -0.31
SHCBP1-207ENST00000569702 Q3C1V9 767 aa13.14□□□□□ -0.31
SHCBP1-207ENST00000569702 SPICE1Q8N0Z3 855 aa13.14□□□□□ -0.31
SHCBP1-207ENST00000569702 ARMC5Q96C12 935 aa13.14□□□□□ -0.31
SHCBP1-207ENST00000569702 GOPCQ9HD26 462 aa13.14□□□□□ -0.31
SHCBP1-207ENST00000569702 HOXC10Q9NYD6 342 aa13.14□□□□□ -0.31
SHCBP1-207ENST00000569702 CLIP2Q9UDT6 1046 aa13.14□□□□□ -0.31
SHCBP1-207ENST00000569702 RABGAP1Q9Y3P9 1069 aa13.14□□□□□ -0.31
SHCBP1-207ENST00000569702 BRCA2P51587 3418 aa13.14□□□□□ -0.31
SHCBP1-207ENST00000569702 RAD50Q92878 1312 aa13.13□□□□□ -0.31
SHCBP1-207ENST00000569702 RLFQ13129 1914 aa13.13□□□□□ -0.31
SHCBP1-207ENST00000569702 DOCK3Q8IZD9 2030 aa13.13□□□□□ -0.31
SHCBP1-207ENST00000569702 F5H6K3 240 aa13.13□□□□□ -0.31
SHCBP1-207ENST00000569702 TNPO2O14787 897 aaKnown RBP13.13□□□□□ -0.31
SHCBP1-207ENST00000569702 TTLL1O95922 423 aa13.13□□□□□ -0.31
SHCBP1-207ENST00000569702 CENPBP07199 599 aaPredicted RBP13.13□□□□□ -0.31
SHCBP1-207ENST00000569702 PCP11498 1178 aaKnown RBP13.13□□□□□ -0.31
SHCBP1-207ENST00000569702 NOVP48745 357 aa13.13□□□□□ -0.31
SHCBP1-207ENST00000569702 HAND2P61296 217 aa13.13□□□□□ -0.31
SHCBP1-207ENST00000569702 PRKCZQ05513 592 aa13.13□□□□□ -0.31
SHCBP1-207ENST00000569702 KLRC3Q07444 240 aa13.13□□□□□ -0.31
SHCBP1-207ENST00000569702 AKNAD1Q5T1N1 836 aa13.13□□□□□ -0.31
SHCBP1-207ENST00000569702 SKAP1Q86WV1 359 aa13.13□□□□□ -0.31
SHCBP1-207ENST00000569702 STAG1Q8WVM7 1258 aa13.13□□□□□ -0.31
SHCBP1-207ENST00000569702 RUFY2Q8WXA3 655 aa13.13□□□□□ -0.31
SHCBP1-207ENST00000569702 TANGO6Q9C0B7 1094 aa13.13□□□□□ -0.31
SHCBP1-207ENST00000569702 IL17RBQ9NRM6 502 aa13.13□□□□□ -0.31
SHCBP1-207ENST00000569702 GABRQQ9UN88 632 aa13.13□□□□□ -0.31
SHCBP1-207ENST00000569702 MYPNQ86TC9 1320 aa13.13□□□□□ -0.31
SHCBP1-207ENST00000569702 TSPY2A6NKD2 308 aa13.12□□□□□ -0.31
SHCBP1-207ENST00000569702 ZNF213O14771 459 aa13.12□□□□□ -0.31
SHCBP1-207ENST00000569702 SGSM2O43147 1006 aa13.12□□□□□ -0.31
SHCBP1-207ENST00000569702 DSG3P32926 999 aa13.12□□□□□ -0.31
SHCBP1-207ENST00000569702 FLT3LGP49771 235 aa13.12□□□□□ -0.31
SHCBP1-207ENST00000569702 TBC1D10CQ8IV04 446 aa13.12□□□□□ -0.31
SHCBP1-207ENST00000569702 GMCL1P1Q8NEA9 526 aa13.12□□□□□ -0.31
SHCBP1-207ENST00000569702 COA7Q96BR5 231 aa13.12□□□□□ -0.31
SHCBP1-207ENST00000569702 PAGR1Q9BTK6 254 aa13.12□□□□□ -0.31
SHCBP1-207ENST00000569702 BTBD7Q9P203 1132 aa13.12□□□□□ -0.31
SHCBP1-207ENST00000569702 GJD2Q9UKL4 321 aa13.12□□□□□ -0.31
SHCBP1-207ENST00000569702 ADAMTS5Q9UNA0 930 aa13.12□□□□□ -0.31
SHCBP1-207ENST00000569702 RANBP6O60518 1105 aaKnown RBP13.11□□□□□ -0.31
SHCBP1-207ENST00000569702 NMT2O60551 498 aa13.11□□□□□ -0.31
SHCBP1-207ENST00000569702 FLOT1O75955 427 aa13.11□□□□□ -0.31
SHCBP1-207ENST00000569702 NDUFB10O96000 172 aa13.11□□□□□ -0.31
SHCBP1-207ENST00000569702 MAPK4P31152 587 aa13.11□□□□□ -0.31
SHCBP1-207ENST00000569702 IRF5Q13568 498 aa13.11□□□□□ -0.31
SHCBP1-207ENST00000569702 SLC9C1Q4G0N8 1177 aa13.11□□□□□ -0.31
SHCBP1-207ENST00000569702 BMP2KLQ5H9B9 411 aa13.11□□□□□ -0.31
SHCBP1-207ENST00000569702 PPP4R3BQ5MIZ7 849 aa13.11□□□□□ -0.31
SHCBP1-207ENST00000569702 ERICH6BQ5W0A0 696 aa13.11□□□□□ -0.31
SHCBP1-207ENST00000569702 MFSD6Q6ZSS7 791 aa13.11□□□□□ -0.31
SHCBP1-207ENST00000569702 MB21D1Q8N884 522 aa13.11□□□□□ -0.31
SHCBP1-207ENST00000569702 NKX2-3Q8TAU0 364 aa13.11□□□□□ -0.31
SHCBP1-207ENST00000569702 RAET1EQ8TD07 263 aa13.11□□□□□ -0.31
SHCBP1-207ENST00000569702 ZNF333Q96JL9 665 aa13.11□□□□□ -0.31
SHCBP1-207ENST00000569702 PORCNQ9H237 461 aa13.11□□□□□ -0.31
SHCBP1-207ENST00000569702 RNF41Q9H4P4 317 aaPredicted RBP13.11□□□□□ -0.31
SHCBP1-207ENST00000569702 TCP11L1Q9NUJ3 509 aa13.11□□□□□ -0.31
SHCBP1-207ENST00000569702 CTNNA3Q9UI47 895 aa13.11□□□□□ -0.31
SHCBP1-207ENST00000569702 MYH4Q9Y623 1939 aa13.1□□□□□ -0.31
SHCBP1-207ENST00000569702 RGS19P49795 217 aa13.1□□□□□ -0.31
SHCBP1-207ENST00000569702 NT5C2P49902 561 aa13.1□□□□□ -0.31
SHCBP1-207ENST00000569702 IMMTQ16891 758 aaKnown RBP13.1□□□□□ -0.31
SHCBP1-207ENST00000569702 FAM83BQ5T0W9 1011 aa13.1□□□□□ -0.31
SHCBP1-207ENST00000569702 NBPF11Q86T75 865 aa13.1□□□□□ -0.31
SHCBP1-207ENST00000569702 LRRC47Q8N1G4 583 aaKnown RBP13.1□□□□□ -0.31
SHCBP1-207ENST00000569702 PXYLP1Q8TE99 480 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms