RNA–Protein interactions for RNA: ENST00000569380.5

SPSB3-211, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-211ENST00000569380 OTOFQ9HC10 1997 aa23.84■■□□□ 1.41
SPSB3-211ENST00000569380 DOCK1Q14185 1865 aa23.84■■□□□ 1.41
SPSB3-211ENST00000569380 A0A1W2PRG0 241 aa23.84■■□□□ 1.41
SPSB3-211ENST00000569380 TOP1P11387 765 aaKnown RBP23.84■■□□□ 1.41
SPSB3-211ENST00000569380 ECE1P42892 770 aa23.84■■□□□ 1.41
SPSB3-211ENST00000569380 SYNE3Q6ZMZ3 975 aa23.84■■□□□ 1.41
SPSB3-211ENST00000569380 ACER1Q8TDN7 264 aa23.84■■□□□ 1.41
SPSB3-211ENST00000569380 KANSL2Q9H9L4 492 aa23.84■■□□□ 1.41
SPSB3-211ENST00000569380 PAPPA2Q9BXP8 1791 aa23.83■■□□□ 1.4
SPSB3-211ENST00000569380 FANCBQ8NB91 859 aa23.83■■□□□ 1.4
SPSB3-211ENST00000569380 NSUN7Q8NE18 718 aaKnown RBP23.83■■□□□ 1.4
SPSB3-211ENST00000569380 UBE2Q2LH0YL09 131 aa23.82■■□□□ 1.4
SPSB3-211ENST00000569380 DDAH1O94760 285 aa23.82■■□□□ 1.4
SPSB3-211ENST00000569380 PLEKHA8P1O95397 391 aa23.82■■□□□ 1.4
SPSB3-211ENST00000569380 RTN1Q16799 776 aa23.82■■□□□ 1.4
SPSB3-211ENST00000569380 STAG2Q8N3U4 1231 aa23.82■■□□□ 1.4
SPSB3-211ENST00000569380 CCDC82Q8N4S0 544 aa23.82■■□□□ 1.4
SPSB3-211ENST00000569380 DDX11Q96FC9 970 aa23.82■■□□□ 1.4
SPSB3-211ENST00000569380 ZNF408Q9H9D4 720 aa23.82■■□□□ 1.4
SPSB3-211ENST00000569380 NYAP2Q9P242 653 aa23.82■■□□□ 1.4
SPSB3-211ENST00000569380 USP17L5A8MUK1 530 aa23.81■■□□□ 1.4
SPSB3-211ENST00000569380 CTNND1O60716 968 aaKnown RBP23.81■■□□□ 1.4
SPSB3-211ENST00000569380 GOLGA8HP0CJ92 632 aa23.81■■□□□ 1.4
SPSB3-211ENST00000569380 NID2Q14112 1375 aa23.81■■□□□ 1.4
SPSB3-211ENST00000569380 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.81■■□□□ 1.41e-7■■■□□ 19
SPSB3-211ENST00000569380 HOOK2Q96ED9 719 aa23.81■■□□□ 1.4
SPSB3-211ENST00000569380 TMEM88BA6NKF7 163 aa23.8■■□□□ 1.4
SPSB3-211ENST00000569380 RAD21O60216 631 aa23.8■■□□□ 1.4
SPSB3-211ENST00000569380 KIAA1755Q5JYT7 1200 aa23.8■■□□□ 1.4
SPSB3-211ENST00000569380 USP17L2Q6R6M4 530 aa23.8■■□□□ 1.4
SPSB3-211ENST00000569380 INTS4Q96HW7 963 aaKnown RBP23.8■■□□□ 1.4
SPSB3-211ENST00000569380 CPVLQ9H3G5 476 aa23.8■■□□□ 1.4
SPSB3-211ENST00000569380 PTPDC1A2A3K4 754 aa23.8■■□□□ 1.4
SPSB3-211ENST00000569380 ASNSP08243 561 aa23.8■■□□□ 1.4
SPSB3-211ENST00000569380 GJB2P29033 226 aa23.8■■□□□ 1.4
SPSB3-211ENST00000569380 ZYXQ15942 572 aaKnown RBP23.8■■□□□ 1.4
SPSB3-211ENST00000569380 NTRK3Q16288 839 aa23.8■■□□□ 1.4
SPSB3-211ENST00000569380 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.8■■□□□ 1.4
SPSB3-211ENST00000569380 NBPF11Q86T75 865 aa23.8■■□□□ 1.4
SPSB3-211ENST00000569380 JMYQ8N9B5 988 aa23.8■■□□□ 1.4
SPSB3-211ENST00000569380 PHKBQ93100 1093 aa23.8■■□□□ 1.4
SPSB3-211ENST00000569380 SMC3Q9UQE7 1217 aa23.8■■□□□ 1.4
SPSB3-211ENST00000569380 FRMPD2Q68DX3 1309 aaPredicted RBP23.79■■□□□ 1.4
SPSB3-211ENST00000569380 DGKZQ13574 1117 aa23.79■■□□□ 1.4
SPSB3-211ENST00000569380 SCYL3Q8IZE3 742 aa23.79■■□□□ 1.4
SPSB3-211ENST00000569380 MAD2L2Q9UI95 211 aa23.79■■□□□ 1.4
SPSB3-211ENST00000569380 PDHBP11177 359 aa23.78■■□□□ 1.4
SPSB3-211ENST00000569380 DDIT3P35638 169 aa23.78■■□□□ 1.4
SPSB3-211ENST00000569380 TTLL12Q14166 644 aaPredicted RBP23.78■■□□□ 1.4
SPSB3-211ENST00000569380 GRM4Q14833 912 aa23.78■■□□□ 1.4
SPSB3-211ENST00000569380 SLC35G1Q2M3R5 365 aa23.78■■□□□ 1.4
SPSB3-211ENST00000569380 MKL1Q969V6 931 aa23.78■■□□□ 1.4
SPSB3-211ENST00000569380 PHIPQ8WWQ0 1821 aa23.78■■□□□ 1.4
SPSB3-211ENST00000569380 FOSBP53539 338 aa23.78■■□□□ 1.4
SPSB3-211ENST00000569380 VGLL4Q14135 290 aa23.78■■□□□ 1.4
SPSB3-211ENST00000569380 CNKSR2Q8WXI2 1034 aa23.78■■□□□ 1.4
SPSB3-211ENST00000569380 CLMNQ96JQ2 1002 aa23.78■■□□□ 1.4
SPSB3-211ENST00000569380 NUP88Q99567 741 aaPredicted RBP23.78■■□□□ 1.4
SPSB3-211ENST00000569380 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.78■■□□□ 1.4
SPSB3-211ENST00000569380 SNCAIPQ9Y6H5 919 aa23.78■■□□□ 1.4
SPSB3-211ENST00000569380 BAZ2BQ9UIF8 2168 aaKnown RBP23.77■■□□□ 1.4
SPSB3-211ENST00000569380 hCG_1642624A0A1W2PR95 340 aa23.77■■□□□ 1.4
SPSB3-211ENST00000569380 CPLX1O14810 134 aa23.77■■□□□ 1.4
SPSB3-211ENST00000569380 CALM1P0DP23 149 aa23.77■■□□□ 1.4
SPSB3-211ENST00000569380 CALM2P0DP24 149 aa23.77■■□□□ 1.4
SPSB3-211ENST00000569380 CALM3P0DP25 149 aa23.77■■□□□ 1.4
SPSB3-211ENST00000569380 FDPSP14324 419 aaKnown RBP23.77■■□□□ 1.4
SPSB3-211ENST00000569380 PKP1Q13835 747 aa23.77■■□□□ 1.4
SPSB3-211ENST00000569380 SPICE1Q8N0Z3 855 aa23.77■■□□□ 1.4
SPSB3-211ENST00000569380 SRBD1Q8N5C6 995 aaKnown RBP23.77■■□□□ 1.4
SPSB3-211ENST00000569380 CTCFLQ8NI51 663 aaPredicted RBP23.77■■□□□ 1.4
SPSB3-211ENST00000569380 SMARCC2Q8TAQ2 1214 aa23.77■■□□□ 1.4
SPSB3-211ENST00000569380 PPP1R12BO60237 982 aaPredicted RBP23.76■■□□□ 1.39
SPSB3-211ENST00000569380 PTPRAP18433 802 aa23.76■■□□□ 1.39
SPSB3-211ENST00000569380 NF2P35240 595 aa23.76■■□□□ 1.39
SPSB3-211ENST00000569380 RCAN1P53805 252 aa23.76■■□□□ 1.39
SPSB3-211ENST00000569380 CST9Q5W186 159 aa23.76■■□□□ 1.39
SPSB3-211ENST00000569380 GPCPD1Q9NPB8 672 aa23.76■■□□□ 1.39
SPSB3-211ENST00000569380 MAP3K9P80192 1104 aa23.75■■□□□ 1.39
SPSB3-211ENST00000569380 FUT2Q10981 343 aa23.75■■□□□ 1.39
SPSB3-211ENST00000569380 SLFN13Q68D06 897 aa23.75■■□□□ 1.39
SPSB3-211ENST00000569380 TTBK2Q6IQ55 1244 aa23.75■■□□□ 1.39
SPSB3-211ENST00000569380 TMTC3Q6ZXV5 915 aa23.75■■□□□ 1.39
SPSB3-211ENST00000569380 KCTD1Q719H9 257 aa23.75■■□□□ 1.39
SPSB3-211ENST00000569380 PIBF1Q8WXW3 757 aa23.75■■□□□ 1.39
SPSB3-211ENST00000569380 AIFM3Q96NN9 605 aa23.75■■□□□ 1.39
SPSB3-211ENST00000569380 ARHGEF10LQ9HCE6 1279 aa23.75■■□□□ 1.39
SPSB3-211ENST00000569380 PALM3A6NDB9 673 aaPredicted RBP23.75■■□□□ 1.39
SPSB3-211ENST00000569380 F5H6K3 240 aa23.75■■□□□ 1.39
SPSB3-211ENST00000569380 NDUFB10O96000 172 aa23.75■■□□□ 1.39
SPSB3-211ENST00000569380 KLRC3Q07444 240 aa23.75■■□□□ 1.39
SPSB3-211ENST00000569380 LLPHQ9BRT6 129 aaKnown RBP23.75■■□□□ 1.39
SPSB3-211ENST00000569380 PICK1Q9NRD5 415 aa23.75■■□□□ 1.39
SPSB3-211ENST00000569380 TMX2Q9Y320 296 aa23.75■■□□□ 1.39
SPSB3-211ENST00000569380 SNHG28P0DPA3 235 aa23.74■■□□□ 1.39
SPSB3-211ENST00000569380 NOL9Q5SY16 702 aaKnown RBP23.74■■□□□ 1.39
SPSB3-211ENST00000569380 SLC26A6Q9BXS9 759 aa23.74■■□□□ 1.39
SPSB3-211ENST00000569380 UBA5Q9GZZ9 404 aa23.74■■□□□ 1.39
SPSB3-211ENST00000569380 PARP1P09874 1014 aaKnown RBP23.73■■□□□ 1.39
SPSB3-211ENST00000569380 IREB2P48200 963 aaKnown RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms