RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 GTF3C2Q8WUA4 911 aaPredicted RBP11.15□□□□□ -0.62
UBR1-210ENST00000569337 ZNF333Q96JL9 665 aa11.15□□□□□ -0.62
UBR1-210ENST00000569337 NAPBQ9H115 298 aa11.15□□□□□ -0.62
UBR1-210ENST00000569337 SH2D4AQ9H788 454 aa11.15□□□□□ -0.62
UBR1-210ENST00000569337 ZNF287Q9HBT7 754 aa11.15□□□□□ -0.62
UBR1-210ENST00000569337 ANO2Q9NQ90 1003 aa11.15□□□□□ -0.62
UBR1-210ENST00000569337 MORF4L1Q9UBU8 362 aa11.15□□□□□ -0.62
UBR1-210ENST00000569337 BIN2Q9UBW5 565 aaPredicted RBP11.15□□□□□ -0.62
UBR1-210ENST00000569337 GABRQQ9UN88 632 aa11.15□□□□□ -0.62
UBR1-210ENST00000569337 A0A1W2PRG0 241 aa11.14□□□□□ -0.63
UBR1-210ENST00000569337 MYCP01106 439 aaPredicted RBP11.14□□□□□ -0.63
UBR1-210ENST00000569337 FGAP02671 866 aa11.14□□□□□ -0.63
UBR1-210ENST00000569337 FLT3LGP49771 235 aa11.14□□□□□ -0.63
UBR1-210ENST00000569337 MFAP1P55081 439 aaKnown RBP11.14□□□□□ -0.63
UBR1-210ENST00000569337 ATP2B2Q01814 1243 aa11.14□□□□□ -0.63
UBR1-210ENST00000569337 MAP4K1Q92918 833 aa11.14□□□□□ -0.63
UBR1-210ENST00000569337 PAGR1Q9BTK6 254 aa11.14□□□□□ -0.63
UBR1-210ENST00000569337 DSCC1Q9BVC3 393 aa11.14□□□□□ -0.63
UBR1-210ENST00000569337 USP26Q9BXU7 913 aa11.14□□□□□ -0.63
UBR1-210ENST00000569337 RPAP3Q9H6T3 665 aaPredicted RBP11.14□□□□□ -0.63
UBR1-210ENST00000569337 KANSL2Q9H9L4 492 aa11.14□□□□□ -0.63
UBR1-210ENST00000569337 RBPJLQ9UBG7 517 aa11.14□□□□□ -0.63
UBR1-210ENST00000569337 TMX2Q9Y320 296 aa11.14□□□□□ -0.63
UBR1-210ENST00000569337 PHIPQ8WWQ0 1821 aa11.14□□□□□ -0.63
UBR1-210ENST00000569337 POTEFA5A3E0 1075 aa11.13□□□□□ -0.63
UBR1-210ENST00000569337 ADCY3O60266 1144 aa11.13□□□□□ -0.63
UBR1-210ENST00000569337 SLC3A2P08195 630 aaKnown RBP11.13□□□□□ -0.63
UBR1-210ENST00000569337 EEF2P13639 858 aaKnown RBP11.13□□□□□ -0.63
UBR1-210ENST00000569337 ALX1Q15699 326 aa11.13□□□□□ -0.63
UBR1-210ENST00000569337 CLEC10AQ8IUN9 316 aa11.13□□□□□ -0.63
UBR1-210ENST00000569337 SIAH1Q8IUQ4 282 aa11.13□□□□□ -0.63
UBR1-210ENST00000569337 ZNF444Q8N0Y2 327 aaPredicted RBP11.13□□□□□ -0.63
UBR1-210ENST00000569337 SLAIN1Q8ND83 568 aa11.13□□□□□ -0.63
UBR1-210ENST00000569337 LPAR1Q92633 364 aa11.13□□□□□ -0.63
UBR1-210ENST00000569337 TXNRD2Q9NNW7 524 aa11.13□□□□□ -0.63
UBR1-210ENST00000569337 HOXC10Q9NYD6 342 aa11.13□□□□□ -0.63
UBR1-210ENST00000569337 RABGAP1Q9Y3P9 1069 aa11.13□□□□□ -0.63
UBR1-210ENST00000569337 RBM8AQ9Y5S9 174 aaKnown RBP11.13□□□□□ -0.63
UBR1-210ENST00000569337 TAF6LQ9Y6J9 622 aa11.13□□□□□ -0.63
UBR1-210ENST00000569337 MYH8P13535 1937 aa11.12□□□□□ -0.63
UBR1-210ENST00000569337 PEX10O60683 326 aa11.12□□□□□ -0.63
UBR1-210ENST00000569337 PRDM1O75626 825 aa11.12□□□□□ -0.63
UBR1-210ENST00000569337 RASA1P20936 1047 aa11.12□□□□□ -0.63
UBR1-210ENST00000569337 MAPK4P31152 587 aa11.12□□□□□ -0.63
UBR1-210ENST00000569337 ERVK-9P63128 1117 aa11.12□□□□□ -0.63
UBR1-210ENST00000569337 ERVK-24P63145 666 aa11.12□□□□□ -0.63
UBR1-210ENST00000569337 UBXN2AP68543 259 aa11.12□□□□□ -0.63
UBR1-210ENST00000569337 PDE4BQ07343 736 aa11.12□□□□□ -0.63
UBR1-210ENST00000569337 IRF5Q13568 498 aa11.12□□□□□ -0.63
UBR1-210ENST00000569337 COG2Q14746 738 aa11.12□□□□□ -0.63
UBR1-210ENST00000569337 Q3C1V9 767 aa11.12□□□□□ -0.63
UBR1-210ENST00000569337 KIAA1211Q6ZU35 1233 aa11.12□□□□□ -0.63
UBR1-210ENST00000569337 SPICE1Q8N0Z3 855 aa11.12□□□□□ -0.63
UBR1-210ENST00000569337 TANGO6Q9C0B7 1094 aa11.12□□□□□ -0.63
UBR1-210ENST00000569337 NBPF3Q9H094 633 aa11.12□□□□□ -0.63
UBR1-210ENST00000569337 VCPKMTQ9H867 229 aa11.12□□□□□ -0.63
UBR1-210ENST00000569337 CWC22Q9HCG8 908 aaKnown RBP11.12□□□□□ -0.63
UBR1-210ENST00000569337 TACC3Q9Y6A5 838 aa11.12□□□□□ -0.63
UBR1-210ENST00000569337 RAD21O60216 631 aa11.11□□□□□ -0.63
UBR1-210ENST00000569337 REC8O95072 547 aa11.11□□□□□ -0.63
UBR1-210ENST00000569337 EN2P19622 333 aaPredicted RBP11.11□□□□□ -0.63
UBR1-210ENST00000569337 HAND2P61296 217 aa11.11□□□□□ -0.63
UBR1-210ENST00000569337 CCNA1P78396 465 aa11.11□□□□□ -0.63
UBR1-210ENST00000569337 PPARAQ07869 468 aa11.11□□□□□ -0.63
UBR1-210ENST00000569337 NECTIN1Q15223 517 aa11.11□□□□□ -0.63
UBR1-210ENST00000569337 LBX2Q6XYB7 198 aa11.11□□□□□ -0.63
UBR1-210ENST00000569337 PXYLP1Q8TE99 480 aa11.11□□□□□ -0.63
UBR1-210ENST00000569337 GOPCQ9HD26 462 aa11.11□□□□□ -0.63
UBR1-210ENST00000569337 GJD2Q9UKL4 321 aa11.11□□□□□ -0.63
UBR1-210ENST00000569337 ROBO3Q96MS0 1386 aa11.11□□□□□ -0.63
UBR1-210ENST00000569337 ATAD5Q96QE3 1844 aa11.11□□□□□ -0.63
UBR1-210ENST00000569337 HTTP42858 3142 aa11.11□□□□□ -0.63
UBR1-210ENST00000569337 ZMYM6O95789 1325 aa11.1□□□□□ -0.63
UBR1-210ENST00000569337 SPDYE16A6NNV3 312 aaPredicted RBP11.1□□□□□ -0.63
UBR1-210ENST00000569337 WDR46O15213 610 aaKnown RBP11.1□□□□□ -0.63
UBR1-210ENST00000569337 FLOT1O75955 427 aa11.1□□□□□ -0.63
UBR1-210ENST00000569337 CYP21A2P08686 494 aa11.1□□□□□ -0.63
UBR1-210ENST00000569337 TSPY3P0CV98 308 aa11.1□□□□□ -0.63
UBR1-210ENST00000569337 TSPY8P0CW00 308 aa11.1□□□□□ -0.63
UBR1-210ENST00000569337 ELNP15502 786 aa11.1□□□□□ -0.63
UBR1-210ENST00000569337 MTFR1Q15390 333 aa11.1□□□□□ -0.63
UBR1-210ENST00000569337 KIAA1755Q5JYT7 1200 aa11.1□□□□□ -0.63
UBR1-210ENST00000569337 POTEEQ6S8J3 1075 aa11.1□□□□□ -0.63
UBR1-210ENST00000569337 SAMD1Q6SPF0 538 aaPredicted RBP11.1□□□□□ -0.63
UBR1-210ENST00000569337 RASEFQ8IZ41 740 aa11.1□□□□□ -0.63
UBR1-210ENST00000569337 NKX2-3Q8TAU0 364 aa11.1□□□□□ -0.63
UBR1-210ENST00000569337 NUDT12Q9BQG2 462 aa11.1□□□□□ -0.63
UBR1-210ENST00000569337 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.1□□□□□ -0.63
UBR1-210ENST00000569337 PORCNQ9H237 461 aa11.1□□□□□ -0.63
UBR1-210ENST00000569337 INCENPQ9NQS7 918 aa11.1□□□□□ -0.63
UBR1-210ENST00000569337 NYAP2Q9P242 653 aa11.1□□□□□ -0.63
UBR1-210ENST00000569337 CLIP2Q9UDT6 1046 aa11.1□□□□□ -0.63
UBR1-210ENST00000569337 U3KPZ7 1027 aaPredicted RBP11.1□□□□□ -0.63
UBR1-210ENST00000569337 LOC285556D6RIA3 1793 aa11.1□□□□□ -0.63
UBR1-210ENST00000569337 PTPRFP10586 1907 aa11.09□□□□□ -0.63
UBR1-210ENST00000569337 SLC27A2O14975 620 aa11.09□□□□□ -0.63
UBR1-210ENST00000569337 CNMDO75829 334 aa11.09□□□□□ -0.63
UBR1-210ENST00000569337 CCL5P13501 91 aa11.09□□□□□ -0.63
UBR1-210ENST00000569337 CYP2B6P20813 491 aa11.09□□□□□ -0.63
UBR1-210ENST00000569337 DSG3P32926 999 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms