RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 ZNF384Q8TF68 577 aa11.13□□□□□ -0.63
CAPN3-219ENST00000569136 ZNF341Q9BYN7 854 aa11.13□□□□□ -0.63
CAPN3-219ENST00000569136 DHX36Q9H2U1 1008 aaKnown RBP11.13□□□□□ -0.63
CAPN3-219ENST00000569136 ECHDC1Q9NTX5 307 aa11.13□□□□□ -0.63
CAPN3-219ENST00000569136 MANSC4A6NHS7 340 aaPredicted RBP11.12□□□□□ -0.63
CAPN3-219ENST00000569136 ZBBXA8MT70 800 aa11.12□□□□□ -0.63
CAPN3-219ENST00000569136 ALDH1A1P00352 501 aa11.12□□□□□ -0.63
CAPN3-219ENST00000569136 OTUD7BQ6GQQ9 843 aa11.12□□□□□ -0.63
CAPN3-219ENST00000569136 SH3BP5LQ7L8J4 393 aa11.12□□□□□ -0.63
CAPN3-219ENST00000569136 TEX11Q8IYF3 940 aa11.12□□□□□ -0.63
CAPN3-219ENST00000569136 MRGPRX2Q96LB1 330 aa11.12□□□□□ -0.63
CAPN3-219ENST00000569136 HAUS7Q99871 368 aa11.12□□□□□ -0.63
CAPN3-219ENST00000569136 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.12□□□□□ -0.63
CAPN3-219ENST00000569136 BCL11AQ9H165 835 aa11.12□□□□□ -0.63
CAPN3-219ENST00000569136 SAGE1Q9NXZ1 904 aa11.12□□□□□ -0.63
CAPN3-219ENST00000569136 ZNF112Q9UJU3 913 aa11.12□□□□□ -0.63
CAPN3-219ENST00000569136 SPEF2Q9C093 1822 aa11.12□□□□□ -0.63
CAPN3-219ENST00000569136 WNT7AO00755 349 aa11.11□□□□□ -0.63
CAPN3-219ENST00000569136 ERC2O15083 957 aa11.11□□□□□ -0.63
CAPN3-219ENST00000569136 FOXN1O15353 648 aa11.11□□□□□ -0.63
CAPN3-219ENST00000569136 VAC14Q08AM6 782 aa11.11□□□□□ -0.63
CAPN3-219ENST00000569136 ARID5BQ14865 1188 aa11.11□□□□□ -0.63
CAPN3-219ENST00000569136 LRRFIP1Q32MZ4 808 aaKnown RBP11.11□□□□□ -0.63
CAPN3-219ENST00000569136 SLC9C2Q5TAH2 1124 aa11.11□□□□□ -0.63
CAPN3-219ENST00000569136 ZSCAN25Q6NSZ9 544 aa11.11□□□□□ -0.63
CAPN3-219ENST00000569136 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-219ENST00000569136 MIGA2Q7L4E1 593 aa11.11□□□□□ -0.63
CAPN3-219ENST00000569136 ERO1BQ86YB8 467 aa11.11□□□□□ -0.63
CAPN3-219ENST00000569136 FOXP4Q8IVH2 680 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-219ENST00000569136 ZFPM1Q8IX07 1006 aa11.11□□□□□ -0.63
CAPN3-219ENST00000569136 MAGEB6Q8N7X4 407 aa11.11□□□□□ -0.63
CAPN3-219ENST00000569136 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.11□□□□□ -0.63
CAPN3-219ENST00000569136 FAM174AQ8TBP5 190 aa11.11□□□□□ -0.63
CAPN3-219ENST00000569136 ZIC5Q96T25 663 aa11.11□□□□□ -0.63
CAPN3-219ENST00000569136 BOLA2Q9H3K6 86 aa11.11□□□□□ -0.63
CAPN3-219ENST00000569136 PAG1Q9NWQ8 432 aa11.11□□□□□ -0.63
CAPN3-219ENST00000569136 AATFQ9NY61 560 aaKnown RBP eCLIP11.11□□□□□ -0.63
CAPN3-219ENST00000569136 PI4KBQ9UBF8 816 aa11.11□□□□□ -0.63
CAPN3-219ENST00000569136 RPAP1Q9BWH6 1393 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-219ENST00000569136 PSME4Q14997 1843 aa11.1□□□□□ -0.63
CAPN3-219ENST00000569136 GOLIM4O00461 696 aa11.1□□□□□ -0.63
CAPN3-219ENST00000569136 SMARCA5O60264 1052 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-219ENST00000569136 FBXO45P0C2W1 286 aa11.1□□□□□ -0.63
CAPN3-219ENST00000569136 VARSP26640 1264 aaKnown RBP11.1□□□□□ -0.63
CAPN3-219ENST00000569136 GTF2A2P52657 109 aa11.1□□□□□ -0.63
CAPN3-219ENST00000569136 PICALMQ13492 652 aa11.1□□□□□ -0.63
CAPN3-219ENST00000569136 IRF5Q13568 498 aa11.1□□□□□ -0.63
CAPN3-219ENST00000569136 C4orf48Q5BLP8 95 aa11.1□□□□□ -0.63
CAPN3-219ENST00000569136 ANKRD45Q5TZF3 282 aa11.1□□□□□ -0.63
CAPN3-219ENST00000569136 ADAM32Q8TC27 787 aa11.1□□□□□ -0.63
CAPN3-219ENST00000569136 WNK4Q96J92 1243 aa11.1□□□□□ -0.63
CAPN3-219ENST00000569136 CLMNQ96JQ2 1002 aa11.1□□□□□ -0.63
CAPN3-219ENST00000569136 WRNIP1Q96S55 665 aa11.1□□□□□ -0.63
CAPN3-219ENST00000569136 DNAJC2Q99543 621 aaKnown RBP11.1□□□□□ -0.63
CAPN3-219ENST00000569136 ANTXR1Q9H6X2 564 aa11.1□□□□□ -0.63
CAPN3-219ENST00000569136 RNF186Q9NXI6 227 aa11.1□□□□□ -0.63
CAPN3-219ENST00000569136 GPSM3Q9Y4H4 160 aa11.1□□□□□ -0.63
CAPN3-219ENST00000569136 POLR2AP24928 1970 aaKnown RBP11.1□□□□□ -0.63
CAPN3-219ENST00000569136 TTC41PQ6P2S7 1318 aa11.09□□□□□ -0.63
CAPN3-219ENST00000569136 CTNND1O60716 968 aaKnown RBP11.09□□□□□ -0.63
CAPN3-219ENST00000569136 GPR37L1O60883 481 aa11.09□□□□□ -0.63
CAPN3-219ENST00000569136 TRPA1O75762 1119 aa11.09□□□□□ -0.63
CAPN3-219ENST00000569136 PDE6AP16499 860 aa11.09□□□□□ -0.63
CAPN3-219ENST00000569136 LBX1P52954 281 aa11.09□□□□□ -0.63
CAPN3-219ENST00000569136 PPATQ06203 517 aa11.09□□□□□ -0.63
CAPN3-219ENST00000569136 NR1H3Q13133 447 aa11.09□□□□□ -0.63
CAPN3-219ENST00000569136 VGLL4Q14135 290 aa11.09□□□□□ -0.63
CAPN3-219ENST00000569136 UBE3CQ15386 1083 aa11.09□□□□□ -0.63
CAPN3-219ENST00000569136 SH3RF3Q8TEJ3 882 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-219ENST00000569136 OSBPL5Q9H0X9 879 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-219ENST00000569136 DDX4Q9NQI0 724 aaKnown RBP11.09□□□□□ -0.63
CAPN3-219ENST00000569136 HERC5Q9UII4 1024 aaKnown RBP11.09□□□□□ -0.63
CAPN3-219ENST00000569136 FZD1Q9UP38 647 aa11.09□□□□□ -0.63
CAPN3-219ENST00000569136 TTC24A2A3L6 582 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-219ENST00000569136 DDTLA6NHG4 134 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-219ENST00000569136 PHF20L1A8MW92 1017 aa11.08□□□□□ -0.64
CAPN3-219ENST00000569136 GLRX3O76003 335 aaKnown RBP11.08□□□□□ -0.64
CAPN3-219ENST00000569136 HSPA8P11142 646 aaKnown RBP11.08□□□□□ -0.64
CAPN3-219ENST00000569136 CETPP11597 493 aa11.08□□□□□ -0.64
CAPN3-219ENST00000569136 NOM1Q5C9Z4 860 aaKnown RBP11.08□□□□□ -0.64
CAPN3-219ENST00000569136 NOL9Q5SY16 702 aaKnown RBP11.08□□□□□ -0.64
CAPN3-219ENST00000569136 SH3RF1Q7Z6J0 888 aa11.08□□□□□ -0.64
CAPN3-219ENST00000569136 TICAM2Q86XR7 235 aa11.08□□□□□ -0.64
CAPN3-219ENST00000569136 CYP4X1Q8N118 509 aa11.08□□□□□ -0.64
CAPN3-219ENST00000569136 EXOC6Q8TAG9 804 aa11.08□□□□□ -0.64
CAPN3-219ENST00000569136 TGFBRAP1Q8WUH2 860 aa11.08□□□□□ -0.64
CAPN3-219ENST00000569136 ZKSCAN4Q969J2 545 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-219ENST00000569136 OPTNQ96CV9 577 aa11.08□□□□□ -0.64
CAPN3-219ENST00000569136 ELP3Q9H9T3 547 aa11.08□□□□□ -0.64
CAPN3-219ENST00000569136 PICK1Q9NRD5 415 aa11.08□□□□□ -0.64
CAPN3-219ENST00000569136 PKD2L1Q9P0L9 805 aa11.08□□□□□ -0.64
CAPN3-219ENST00000569136 PCDHB9Q9Y5E1 797 aa11.08□□□□□ -0.64
CAPN3-219ENST00000569136 CXCL11O14625 94 aa11.07□□□□□ -0.64
CAPN3-219ENST00000569136 HLA-DOAP06340 250 aa11.07□□□□□ -0.64
CAPN3-219ENST00000569136 USP5P45974 858 aa11.07□□□□□ -0.64
CAPN3-219ENST00000569136 PPIL2Q13356 520 aa11.07□□□□□ -0.64
CAPN3-219ENST00000569136 SNAPC2Q13487 334 aa11.07□□□□□ -0.64
CAPN3-219ENST00000569136 ADGRA1Q86SQ6 560 aa11.07□□□□□ -0.64
CAPN3-219ENST00000569136 TTC6Q86TZ1 520 aa11.07□□□□□ -0.64
CAPN3-219ENST00000569136 METTL16Q86W50 562 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms