RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 TMEM40Q8WWA1 233 aa5.47□□□□□ -1.53
HMGB1P6-201ENST00000569046 KREMEN1Q96MU8 473 aa5.47□□□□□ -1.53
HMGB1P6-201ENST00000569046 ATP13A1Q9HD20 1204 aa5.47□□□□□ -1.53
HMGB1P6-201ENST00000569046 GINM1Q9NU53 330 aa5.47□□□□□ -1.53
HMGB1P6-201ENST00000569046 ZNRF3Q9ULT6 936 aa5.47□□□□□ -1.53
HMGB1P6-201ENST00000569046 WDR62O43379 1518 aa5.47□□□□□ -1.53
HMGB1P6-201ENST00000569046 MEIS3P2A8K0S8 358 aa5.46□□□□□ -1.54
HMGB1P6-201ENST00000569046 ACRP10323 421 aa5.46□□□□□ -1.54
HMGB1P6-201ENST00000569046 NME1P15531 152 aaKnown RBP5.46□□□□□ -1.54
HMGB1P6-201ENST00000569046 GBP1P32455 592 aa5.46□□□□□ -1.54
HMGB1P6-201ENST00000569046 GJA8P48165 433 aa5.46□□□□□ -1.54
HMGB1P6-201ENST00000569046 MLECQ14165 292 aa5.46□□□□□ -1.54
HMGB1P6-201ENST00000569046 CBLL1Q75N03 491 aa5.46□□□□□ -1.54
HMGB1P6-201ENST00000569046 DTWD2Q8NBA8 298 aa5.46□□□□□ -1.54
HMGB1P6-201ENST00000569046 RNF141Q8WVD5 230 aa5.46□□□□□ -1.54
HMGB1P6-201ENST00000569046 COX4I2Q96KJ9 171 aa5.46□□□□□ -1.54
HMGB1P6-201ENST00000569046 TGIF2Q9GZN2 237 aa5.46□□□□□ -1.54
HMGB1P6-201ENST00000569046 DUSP15Q9H1R2 295 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P6-201ENST00000569046 PRDM7Q9NQW5 492 aa5.46□□□□□ -1.54
HMGB1P6-201ENST00000569046 ADAMTS6Q9UKP5 1117 aa5.46□□□□□ -1.54
HMGB1P6-201ENST00000569046 TCF3P15923 654 aa5.45□□□□□ -1.54
HMGB1P6-201ENST00000569046 IKZF1Q13422 519 aa5.45□□□□□ -1.54
HMGB1P6-201ENST00000569046 PLCL1Q15111 1095 aa5.45□□□□□ -1.54
HMGB1P6-201ENST00000569046 CCDC81Q6ZN84 652 aa5.45□□□□□ -1.54
HMGB1P6-201ENST00000569046 AGBL5Q8NDL9 886 aa5.45□□□□□ -1.54
HMGB1P6-201ENST00000569046 PIWIL2Q8TC59 973 aaKnown RBP5.45□□□□□ -1.54
HMGB1P6-201ENST00000569046 RASGRP4Q8TDF6 673 aa5.45□□□□□ -1.54
HMGB1P6-201ENST00000569046 ASB11Q8WXH4 323 aa5.45□□□□□ -1.54
HMGB1P6-201ENST00000569046 UBE2FQ969M7 185 aa5.45□□□□□ -1.54
HMGB1P6-201ENST00000569046 GPRASP2Q96D09 838 aa5.45□□□□□ -1.54
HMGB1P6-201ENST00000569046 SLC9A7Q96T83 725 aa5.45□□□□□ -1.54
HMGB1P6-201ENST00000569046 MBNL3Q9NUK0 354 aaKnown RBP5.45□□□□□ -1.54
HMGB1P6-201ENST00000569046 ZSWIM5Q9P217 1185 aa5.45□□□□□ -1.54
HMGB1P6-201ENST00000569046 EFR3BQ9Y2G0 817 aa5.45□□□□□ -1.54
HMGB1P6-201ENST00000569046 PEG3Q9GZU2 1588 aa5.45□□□□□ -1.54
HMGB1P6-201ENST00000569046 SHISA3A0PJX4 238 aa5.44□□□□□ -1.54
HMGB1P6-201ENST00000569046 TNFRSF10CO14798 259 aa5.44□□□□□ -1.54
HMGB1P6-201ENST00000569046 RNASE1P07998 156 aaKnown RBP5.44□□□□□ -1.54
HMGB1P6-201ENST00000569046 SRFP11831 508 aa5.44□□□□□ -1.54
HMGB1P6-201ENST00000569046 SOX9P48436 509 aa5.44□□□□□ -1.54
HMGB1P6-201ENST00000569046 IRAK1P51617 712 aa5.44□□□□□ -1.54
HMGB1P6-201ENST00000569046 LRRFIP1Q32MZ4 808 aaKnown RBP5.44□□□□□ -1.54
HMGB1P6-201ENST00000569046 ZNF792Q3KQV3 632 aa5.44□□□□□ -1.54
HMGB1P6-201ENST00000569046 ANGEL2Q5VTE6 544 aaKnown RBP5.44□□□□□ -1.54
HMGB1P6-201ENST00000569046 RUFY4Q6ZNE9 571 aa5.44□□□□□ -1.54
HMGB1P6-201ENST00000569046 TMEM192Q8IY95 271 aa5.44□□□□□ -1.54
HMGB1P6-201ENST00000569046 ZNF512BQ96KM6 892 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P6-201ENST00000569046 FERD3LQ96RJ6 166 aa5.44□□□□□ -1.54
HMGB1P6-201ENST00000569046 CADPSQ9ULU8 1353 aa5.43□□□□□ -1.54
HMGB1P6-201ENST00000569046 FAM86C2PA6NEL3 165 aa5.43□□□□□ -1.54
HMGB1P6-201ENST00000569046 ERCC5P28715 1186 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P6-201ENST00000569046 ZP2Q05996 745 aa5.43□□□□□ -1.54
HMGB1P6-201ENST00000569046 ZYXQ15942 572 aaKnown RBP5.43□□□□□ -1.54
HMGB1P6-201ENST00000569046 NBPF12Q5TAG4 269 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P6-201ENST00000569046 FBXW10Q5XX13 1052 aa5.43□□□□□ -1.54
HMGB1P6-201ENST00000569046 THAP5Q7Z6K1 395 aa5.43□□□□□ -1.54
HMGB1P6-201ENST00000569046 ASPNQ9BXN1 380 aa5.43□□□□□ -1.54
HMGB1P6-201ENST00000569046 GPR62Q9BZJ7 368 aa5.43□□□□□ -1.54
HMGB1P6-201ENST00000569046 CARS2Q9HA77 564 aaKnown RBP5.43□□□□□ -1.54
HMGB1P6-201ENST00000569046 IGSF5Q9NSI5 407 aa5.43□□□□□ -1.54
HMGB1P6-201ENST00000569046 CEP164Q9UPV0 1460 aa5.43□□□□□ -1.54
HMGB1P6-201ENST00000569046 ESR1P03372 595 aa5.42□□□□□ -1.54
HMGB1P6-201ENST00000569046 TAL1P17542 331 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P6-201ENST00000569046 NASPP49321 788 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P6-201ENST00000569046 SNW1Q13573 536 aaKnown RBP5.42□□□□□ -1.54
HMGB1P6-201ENST00000569046 GAB4Q2WGN9 574 aa5.42□□□□□ -1.54
HMGB1P6-201ENST00000569046 CYB5RLQ6IPT4 315 aa5.42□□□□□ -1.54
HMGB1P6-201ENST00000569046 LSRQ86X29 649 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P6-201ENST00000569046 RBBP8NLQ8NC74 664 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P6-201ENST00000569046 SLC6A18Q96N87 628 aa5.42□□□□□ -1.54
HMGB1P6-201ENST00000569046 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.42□□□□□ -1.54
HMGB1P6-201ENST00000569046 CCSER2Q9H7U1 834 aa5.42□□□□□ -1.54
HMGB1P6-201ENST00000569046 KCNH3Q9ULD8 1083 aa5.42□□□□□ -1.54
HMGB1P6-201ENST00000569046 INPP5FQ9Y2H2 1132 aa5.42□□□□□ -1.54
HMGB1P6-201ENST00000569046 FANCD2Q9BXW9 1451 aa5.41□□□□□ -1.54
HMGB1P6-201ENST00000569046 CHD1O14646 1710 aa5.41□□□□□ -1.54
HMGB1P6-201ENST00000569046 CLEC3AO75596 197 aa5.41□□□□□ -1.54
HMGB1P6-201ENST00000569046 IMPDH2P12268 514 aa5.41□□□□□ -1.54
HMGB1P6-201ENST00000569046 TPP2P29144 1249 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P6-201ENST00000569046 CCNFP41002 786 aa5.41□□□□□ -1.54
HMGB1P6-201ENST00000569046 COL9A2Q14055 689 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P6-201ENST00000569046 INTS3Q68E01 1043 aaKnown RBP5.41□□□□□ -1.54
HMGB1P6-201ENST00000569046 MCTP1Q6DN14 999 aa5.41□□□□□ -1.54
HMGB1P6-201ENST00000569046 SLC23A3Q6PIS1 610 aa5.41□□□□□ -1.54
HMGB1P6-201ENST00000569046 LRRN4CLQ8ND94 238 aa5.41□□□□□ -1.54
HMGB1P6-201ENST00000569046 PI4K2BQ8TCG2 481 aa5.41□□□□□ -1.54
HMGB1P6-201ENST00000569046 URB2Q14146 1524 aaKnown RBP5.4□□□□□ -1.54
HMGB1P6-201ENST00000569046 C9IYK1 514 aa5.4□□□□□ -1.54
HMGB1P6-201ENST00000569046 GIPRP48546 466 aa5.4□□□□□ -1.54
HMGB1P6-201ENST00000569046 NBPF9Q3BBW0 867 aa5.4□□□□□ -1.54
HMGB1P6-201ENST00000569046 TMC3Q7Z5M5 1100 aa5.4□□□□□ -1.54
HMGB1P6-201ENST00000569046 TSPYL5Q86VY4 417 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P6-201ENST00000569046 SHDQ96IW2 340 aa5.4□□□□□ -1.54
HMGB1P6-201ENST00000569046 SPATA32Q96LK8 384 aa5.4□□□□□ -1.54
HMGB1P6-201ENST00000569046 TM9SF2Q99805 663 aa5.4□□□□□ -1.54
HMGB1P6-201ENST00000569046 RC3H2Q9HBD1 1191 aaKnown RBP5.4□□□□□ -1.54
HMGB1P6-201ENST00000569046 C19orf73Q9NVV2 129 aa5.4□□□□□ -1.54
HMGB1P6-201ENST00000569046 LMCD1Q9NZU5 365 aa5.4□□□□□ -1.54
HMGB1P6-201ENST00000569046 ARHGEF11O15085 1522 aa5.39□□□□□ -1.55
HMGB1P6-201ENST00000569046 E9PSI1 815 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms