RNA–Protein interactions for RNA: ENST00000568799.1

GGA2-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 1,403 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-212ENST00000568799 SMC5Q8IY18 1101 aa25.2■■□□□ 1.63
GGA2-212ENST00000568799 IFNL3Q8IZI9 196 aa25.2■■□□□ 1.63
GGA2-212ENST00000568799 SEC62Q99442 399 aaKnown RBP25.2■■□□□ 1.63
GGA2-212ENST00000568799 NAPBQ9H115 298 aa25.2■■□□□ 1.63
GGA2-212ENST00000568799 EPB41L4AQ9HCS5 686 aaPredicted RBP25.2■■□□□ 1.63
GGA2-212ENST00000568799 GJB1P08034 283 aa25.2■■□□□ 1.62
GGA2-212ENST00000568799 SLC3A2P08195 630 aaKnown RBP25.2■■□□□ 1.62
GGA2-212ENST00000568799 COG2Q14746 738 aa25.2■■□□□ 1.62
GGA2-212ENST00000568799 Q3C1V9 767 aa25.2■■□□□ 1.62
GGA2-212ENST00000568799 LBX2Q6XYB7 198 aa25.2■■□□□ 1.62
GGA2-212ENST00000568799 ROBO3Q96MS0 1386 aa25.19■■□□□ 1.62
GGA2-212ENST00000568799 WDR78Q5VTH9 848 aa25.19■■□□□ 1.62
GGA2-212ENST00000568799 ZNF444Q8N0Y2 327 aaPredicted RBP25.19■■□□□ 1.62
GGA2-212ENST00000568799 VCPKMTQ9H867 229 aa25.19■■□□□ 1.62
GGA2-212ENST00000568799 GOPCQ9HD26 462 aa25.19■■□□□ 1.62
GGA2-212ENST00000568799 GJD2Q9UKL4 321 aa25.19■■□□□ 1.62
GGA2-212ENST00000568799 SPDYE16A6NNV3 312 aaPredicted RBP25.18■■□□□ 1.62
GGA2-212ENST00000568799 RAD21O60216 631 aa25.18■■□□□ 1.62
GGA2-212ENST00000568799 HMGCRP04035 888 aa25.18■■□□□ 1.62
GGA2-212ENST00000568799 EEF2P13639 858 aaKnown RBP25.18■■□□□ 1.62
GGA2-212ENST00000568799 GPR142Q7Z601 462 aa25.18■■□□□ 1.62
GGA2-212ENST00000568799 PLEKHH3Q7Z736 793 aa25.18■■□□□ 1.62
GGA2-212ENST00000568799 CHD1LQ86WJ1 897 aa25.18■■□□□ 1.62
GGA2-212ENST00000568799 SPICE1Q8N0Z3 855 aa25.18■■□□□ 1.62
GGA2-212ENST00000568799 UNC93B1Q9H1C4 597 aa25.18■■□□□ 1.62
GGA2-212ENST00000568799 PORCNQ9H237 461 aa25.18■■□□□ 1.62
GGA2-212ENST00000568799 TRIM6-TRIM34B2RNG4 842 aa25.17■■□□□ 1.62
GGA2-212ENST00000568799 CYP2B6P20813 491 aa25.17■■□□□ 1.62
GGA2-212ENST00000568799 GJA8P48165 433 aa25.17■■□□□ 1.62
GGA2-212ENST00000568799 WDR46O15213 610 aaKnown RBP25.16■■□□□ 1.62
GGA2-212ENST00000568799 FLOT1O75955 427 aa25.16■■□□□ 1.62
GGA2-212ENST00000568799 RASA1P20936 1047 aa25.16■■□□□ 1.62
GGA2-212ENST00000568799 PDE4BQ07343 736 aa25.16■■□□□ 1.62
GGA2-212ENST00000568799 PRPF38BQ5VTL8 546 aaKnown RBP25.16■■□□□ 1.62
GGA2-212ENST00000568799 TICAM2Q86XR7 235 aa25.16■■□□□ 1.62
GGA2-212ENST00000568799 SIAH1Q8IUQ4 282 aa25.16■■□□□ 1.62
GGA2-212ENST00000568799 IVNS1ABPQ9Y6Y0 642 aa25.16■■□□□ 1.62
GGA2-212ENST00000568799 DOCK3Q8IZD9 2030 aa25.15■■□□□ 1.62
GGA2-212ENST00000568799 CNMDO75829 334 aa25.15■■□□□ 1.62
GGA2-212ENST00000568799 IGHDP01880 384 aa25.15■■□□□ 1.62
GGA2-212ENST00000568799 RGS2P41220 211 aa25.15■■□□□ 1.62
GGA2-212ENST00000568799 TRMT44Q8IYL2 757 aaKnown RBP25.15■■□□□ 1.62
GGA2-212ENST00000568799 MB21D1Q8N884 522 aa25.15■■□□□ 1.62
GGA2-212ENST00000568799 U2AF1L4Q8WU68 220 aaKnown RBP25.15■■□□□ 1.62
GGA2-212ENST00000568799 HELLSQ9NRZ9 838 aa25.15■■□□□ 1.62
GGA2-212ENST00000568799 MKI67P46013 3256 aaKnown RBP25.15■■□□□ 1.62
GGA2-212ENST00000568799 XRCC5P13010 732 aaKnown RBP25.14■■□□□ 1.62
GGA2-212ENST00000568799 NUCB1Q02818 461 aa25.14■■□□□ 1.62
GGA2-212ENST00000568799 RILPL2Q969X0 211 aa25.14■■□□□ 1.62
GGA2-212ENST00000568799 BTBD7Q9P203 1132 aa25.14■■□□□ 1.62
GGA2-212ENST00000568799 PRDM1O75626 825 aa25.13■■□□□ 1.61
GGA2-212ENST00000568799 CAPN2P17655 700 aa25.13■■□□□ 1.61
GGA2-212ENST00000568799 KIAA1755Q5JYT7 1200 aa25.13■■□□□ 1.61
GGA2-212ENST00000568799 POTEEQ6S8J3 1075 aa25.13■■□□□ 1.61
GGA2-212ENST00000568799 SAMD1Q6SPF0 538 aaPredicted RBP25.13■■□□□ 1.61
GGA2-212ENST00000568799 CCDC129Q6ZRS4 1044 aa25.13■■□□□ 1.61
GGA2-212ENST00000568799 ZKSCAN1P17029 563 aaPredicted RBP25.12■■□□□ 1.61
GGA2-212ENST00000568799 DSG3P32926 999 aa25.12■■□□□ 1.61
GGA2-212ENST00000568799 PPARAQ07869 468 aa25.12■■□□□ 1.61
GGA2-212ENST00000568799 DEFB118Q96PH6 123 aa25.12■■□□□ 1.61
GGA2-212ENST00000568799 SGPL1O95470 568 aa25.12■■□□□ 1.61
GGA2-212ENST00000568799 TSPY3P0CV98 308 aa25.12■■□□□ 1.61
GGA2-212ENST00000568799 TSPY8P0CW00 308 aa25.12■■□□□ 1.61
GGA2-212ENST00000568799 PLS1Q14651 629 aa25.12■■□□□ 1.61
GGA2-212ENST00000568799 SHISA4Q96DD7 197 aa25.12■■□□□ 1.61
GGA2-212ENST00000568799 APBA2Q99767 749 aa25.12■■□□□ 1.61
GGA2-212ENST00000568799 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.12■■□□□ 1.61
GGA2-212ENST00000568799 HMX1Q9NP08 348 aaPredicted RBP25.12■■□□□ 1.61
GGA2-212ENST00000568799 NYAP2Q9P242 653 aa25.12■■□□□ 1.61
GGA2-212ENST00000568799 TFRCP02786 760 aaKnown RBP25.11■■□□□ 1.61
GGA2-212ENST00000568799 MCMDC2Q4G0Z9 681 aa25.11■■□□□ 1.61
GGA2-212ENST00000568799 MORN1Q5T089 497 aa25.11■■□□□ 1.61
GGA2-212ENST00000568799 TRIB2Q92519 343 aa25.11■■□□□ 1.61
GGA2-212ENST00000568799 SPATC1LQ9H0A9 340 aa25.11■■□□□ 1.61
GGA2-212ENST00000568799 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.11■■□□□ 1.613e-6■■□□□ 14.1
GGA2-212ENST00000568799 SLC15A5A6NIM6 579 aa25.1■■□□□ 1.61
GGA2-212ENST00000568799 IRX6P78412 446 aaPredicted RBP25.1■■□□□ 1.61
GGA2-212ENST00000568799 MAP2K5Q13163 448 aa25.1■■□□□ 1.61
GGA2-212ENST00000568799 RPTORQ8N122 1335 aa25.1■■□□□ 1.61
GGA2-212ENST00000568799 ATG4CQ96DT6 458 aa25.1■■□□□ 1.61
GGA2-212ENST00000568799 PAK6Q9NQU5 681 aaPredicted RBP25.1■■□□□ 1.61
GGA2-212ENST00000568799 PTPREP23469 700 aa25.09■■□□□ 1.61
GGA2-212ENST00000568799 PLEKHM2Q8IWE5 1019 aa25.09■■□□□ 1.61
GGA2-212ENST00000568799 USP6NLQ92738 828 aa25.09■■□□□ 1.61
GGA2-212ENST00000568799 MOV10L1Q9BXT6 1211 aaKnown RBP25.09■■□□□ 1.61
GGA2-212ENST00000568799 OSBPL3Q9H4L5 887 aa25.09■■□□□ 1.61
GGA2-212ENST00000568799 CLIP2Q9UDT6 1046 aa25.09■■□□□ 1.61
GGA2-212ENST00000568799 TTLL1O95922 423 aa25.08■■□□□ 1.61
GGA2-212ENST00000568799 PPP4R3BQ5MIZ7 849 aa25.08■■□□□ 1.61
GGA2-212ENST00000568799 FAM83BQ5T0W9 1011 aa25.08■■□□□ 1.61
GGA2-212ENST00000568799 SHCBP1Q8NEM2 672 aa25.08■■□□□ 1.61
GGA2-212ENST00000568799 FAM227BQ96M60 508 aa25.08■■□□□ 1.61
GGA2-212ENST00000568799 FARP2O94887 1054 aaPredicted RBP25.07■■□□□ 1.6
GGA2-212ENST00000568799 PRKAR2AP13861 404 aaKnown RBP25.07■■□□□ 1.6
GGA2-212ENST00000568799 MFAP1P55081 439 aaKnown RBP25.07■■□□□ 1.6
GGA2-212ENST00000568799 CEP95Q96GE4 821 aa25.07■■□□□ 1.6
GGA2-212ENST00000568799 A0A0D9SFI3 127 aa25.06■■□□□ 1.6
GGA2-212ENST00000568799 F5H6K3 240 aa25.06■■□□□ 1.6
GGA2-212ENST00000568799 STRNO43815 780 aa25.06■■□□□ 1.6
GGA2-212ENST00000568799 NEFLP07196 543 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms