RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 B4GALNT3Q6L9W6 998 aa14.59□□□□□ -0.07
VPS9D1-207ENST00000568691 USP17L2Q6R6M4 530 aa14.59□□□□□ -0.07
VPS9D1-207ENST00000568691 ERICH6Q7L0X2 663 aa14.59□□□□□ -0.07
VPS9D1-207ENST00000568691 TEX11Q8IYF3 940 aa14.59□□□□□ -0.07
VPS9D1-207ENST00000568691 CXXC1Q9P0U4 656 aaPredicted RBP14.59□□□□□ -0.07
VPS9D1-207ENST00000568691 HMG20BQ9P0W2 317 aa14.59□□□□□ -0.07
VPS9D1-207ENST00000568691 ZNF236Q9UL36 1845 aa14.58□□□□□ -0.08
VPS9D1-207ENST00000568691 USP17L15C9J2P7 530 aa14.58□□□□□ -0.08
VPS9D1-207ENST00000568691 USP17L13C9JLJ4 530 aa14.58□□□□□ -0.08
VPS9D1-207ENST00000568691 USP17L11C9JVI0 530 aa14.58□□□□□ -0.08
VPS9D1-207ENST00000568691 USP17L18D6R9N7 530 aa14.58□□□□□ -0.08
VPS9D1-207ENST00000568691 USP17L22D6RA61 530 aa14.58□□□□□ -0.08
VPS9D1-207ENST00000568691 USP17L17D6RBQ6 530 aa14.58□□□□□ -0.08
VPS9D1-207ENST00000568691 USP17L19D6RCP7 530 aa14.58□□□□□ -0.08
VPS9D1-207ENST00000568691 USP17L20D6RJB6 530 aa14.58□□□□□ -0.08
VPS9D1-207ENST00000568691 PQBP1O60828 265 aaKnown RBP14.58□□□□□ -0.08
VPS9D1-207ENST00000568691 GLRX3O76003 335 aaKnown RBP14.58□□□□□ -0.08
VPS9D1-207ENST00000568691 MAP4K4O95819 1239 aaPredicted RBP14.58□□□□□ -0.08
VPS9D1-207ENST00000568691 ADORA2AP29274 412 aa14.58□□□□□ -0.08
VPS9D1-207ENST00000568691 CCNA1P78396 465 aa14.58□□□□□ -0.08
VPS9D1-207ENST00000568691 USP17L24Q0WX57 530 aa14.58□□□□□ -0.08
VPS9D1-207ENST00000568691 ZYXQ15942 572 aaKnown RBP14.58□□□□□ -0.08
VPS9D1-207ENST00000568691 SPTY2D1Q68D10 685 aaPredicted RBP14.58□□□□□ -0.08
VPS9D1-207ENST00000568691 ACER1Q8TDN7 264 aa14.58□□□□□ -0.08
VPS9D1-207ENST00000568691 FBXO3Q9UK99 471 aa14.58□□□□□ -0.08
VPS9D1-207ENST00000568691 COG6Q9Y2V7 657 aa14.58□□□□□ -0.08
VPS9D1-207ENST00000568691 PLXNA1Q9UIW2 1896 aa14.58□□□□□ -0.08
VPS9D1-207ENST00000568691 VCAM1P19320 739 aa14.57□□□□□ -0.08
VPS9D1-207ENST00000568691 ADGRA1Q86SQ6 560 aa14.57□□□□□ -0.08
VPS9D1-207ENST00000568691 MAPKAPK5Q8IW41 473 aa14.57□□□□□ -0.08
VPS9D1-207ENST00000568691 XAGE2Q96GT9 111 aa14.57□□□□□ -0.08
VPS9D1-207ENST00000568691 MOV10L1Q9BXT6 1211 aaKnown RBP14.57□□□□□ -0.08
VPS9D1-207ENST00000568691 CWC22Q9HCG8 908 aaKnown RBP14.57□□□□□ -0.08
VPS9D1-207ENST00000568691 TBX21Q9UL17 535 aa14.57□□□□□ -0.08
VPS9D1-207ENST00000568691 PALD1Q9ULE6 856 aa14.57□□□□□ -0.08
VPS9D1-207ENST00000568691 YBX2Q9Y2T7 364 aaKnown RBP14.57□□□□□ -0.08
VPS9D1-207ENST00000568691 A0A1W2PQ45 241 aaPredicted RBP14.56□□□□□ -0.08
VPS9D1-207ENST00000568691 A0A1W2PQY0 241 aa14.56□□□□□ -0.08
VPS9D1-207ENST00000568691 PGK1P00558 417 aa14.56□□□□□ -0.08
VPS9D1-207ENST00000568691 GH2P01242 217 aa14.56□□□□□ -0.08
VPS9D1-207ENST00000568691 IL15P40933 162 aaPredicted RBP14.56□□□□□ -0.08
VPS9D1-207ENST00000568691 CENPQQ7L2Z9 268 aaPredicted RBP14.56□□□□□ -0.08
VPS9D1-207ENST00000568691 ANKRD33Q7Z3H0 272 aa14.56□□□□□ -0.08
VPS9D1-207ENST00000568691 ALYREFQ86V81 257 aaKnown RBP14.56□□□□□ -0.08
VPS9D1-207ENST00000568691 LENG1Q96BZ8 264 aaPredicted RBP14.56□□□□□ -0.08
VPS9D1-207ENST00000568691 GINM1Q9NU53 330 aa14.56□□□□□ -0.08
VPS9D1-207ENST00000568691 TMEM39AQ9NV64 488 aa14.56□□□□□ -0.08
VPS9D1-207ENST00000568691 FLT1P17948 1338 aa14.56□□□□□ -0.08
VPS9D1-207ENST00000568691 SMCHD1A6NHR9 2005 aa14.55□□□□□ -0.08
VPS9D1-207ENST00000568691 TRANK1O15050 2925 aa14.55□□□□□ -0.08
VPS9D1-207ENST00000568691 A0A1B0GUL7 405 aa14.55□□□□□ -0.08
VPS9D1-207ENST00000568691 TAL1P17542 331 aaPredicted RBP14.55□□□□□ -0.08
VPS9D1-207ENST00000568691 IGFBP4P22692 258 aa14.55□□□□□ -0.08
VPS9D1-207ENST00000568691 DPP9Q86TI2 863 aa14.55□□□□□ -0.08
VPS9D1-207ENST00000568691 FOXP4Q8IVH2 680 aaPredicted RBP14.55□□□□□ -0.08
VPS9D1-207ENST00000568691 ITPRIPQ8IWB1 547 aa14.55□□□□□ -0.08
VPS9D1-207ENST00000568691 TGFBRAP1Q8WUH2 860 aa14.55□□□□□ -0.08
VPS9D1-207ENST00000568691 DHX36Q9H2U1 1008 aaKnown RBP14.55□□□□□ -0.08
VPS9D1-207ENST00000568691 IVNS1ABPQ9Y6Y0 642 aa14.55□□□□□ -0.08
VPS9D1-207ENST00000568691 TIMP1P01033 207 aa14.54□□□□□ -0.08
VPS9D1-207ENST00000568691 LDHCP07864 332 aa14.54□□□□□ -0.08
VPS9D1-207ENST00000568691 GUCY1A2P33402 732 aa14.54□□□□□ -0.08
VPS9D1-207ENST00000568691 TMEM57Q8N5G2 664 aa14.54□□□□□ -0.08
VPS9D1-207ENST00000568691 SLC44A5Q8NCS7 719 aa14.54□□□□□ -0.08
VPS9D1-207ENST00000568691 TOX2Q96NM4 488 aa14.54□□□□□ -0.08
VPS9D1-207ENST00000568691 KIAA1683Q9H0B3 1180 aa14.54□□□□□ -0.08
VPS9D1-207ENST00000568691 NKX2-4Q9H2Z4 354 aa14.54□□□□□ -0.08
VPS9D1-207ENST00000568691 COPRSQ9NQ92 184 aa14.54□□□□□ -0.08
VPS9D1-207ENST00000568691 XPNPEP3Q9NQH7 507 aa14.54□□□□□ -0.08
VPS9D1-207ENST00000568691 AATFQ9NY61 560 aaKnown RBP eCLIP14.54□□□□□ -0.08
VPS9D1-207ENST00000568691 HCN4Q9Y3Q4 1203 aa14.54□□□□□ -0.08
VPS9D1-207ENST00000568691 CDK5RAP2Q96SN8 1893 aa14.53□□□□□ -0.08
VPS9D1-207ENST00000568691 FAM86C2PA6NEL3 165 aa14.53□□□□□ -0.08
VPS9D1-207ENST00000568691 ADAMTS4O75173 837 aa14.53□□□□□ -0.08
VPS9D1-207ENST00000568691 ACRP10323 421 aa14.53□□□□□ -0.08
VPS9D1-207ENST00000568691 CSF2RAP15509 400 aa14.53□□□□□ -0.08
VPS9D1-207ENST00000568691 ERCC3P19447 782 aa14.53□□□□□ -0.08
VPS9D1-207ENST00000568691 PPP4CP60510 307 aa14.53□□□□□ -0.08
VPS9D1-207ENST00000568691 IRX5P78411 483 aaPredicted RBP14.53□□□□□ -0.08
VPS9D1-207ENST00000568691 GSTO1P78417 241 aa14.53□□□□□ -0.08
VPS9D1-207ENST00000568691 MFSD5Q6N075 450 aa14.53□□□□□ -0.08
VPS9D1-207ENST00000568691 TATDN1Q6P1N9 297 aa14.53□□□□□ -0.08
VPS9D1-207ENST00000568691 ZNF365Q70YC5 407 aa14.53□□□□□ -0.08
VPS9D1-207ENST00000568691 SPATA5Q8NB90 893 aa14.53□□□□□ -0.08
VPS9D1-207ENST00000568691 MAML3Q96JK9 1138 aa14.53□□□□□ -0.08
VPS9D1-207ENST00000568691 RPAP3Q9H6T3 665 aaPredicted RBP14.53□□□□□ -0.08
VPS9D1-207ENST00000568691 SAP30BPQ9UHR5 308 aaKnown RBP14.53□□□□□ -0.08
VPS9D1-207ENST00000568691 TNNQ9UQP3 1299 aa14.53□□□□□ -0.08
VPS9D1-207ENST00000568691 MCAMP43121 646 aa14.52□□□□□ -0.09
VPS9D1-207ENST00000568691 TFCP2Q12800 502 aa14.52□□□□□ -0.09
VPS9D1-207ENST00000568691 TMEM31Q5JXX7 168 aa14.52□□□□□ -0.09
VPS9D1-207ENST00000568691 KIAA1755Q5JYT7 1200 aa14.52□□□□□ -0.09
VPS9D1-207ENST00000568691 CCSAPQ6IQ19 270 aaPredicted RBP14.52□□□□□ -0.09
VPS9D1-207ENST00000568691 CCDC129Q6ZRS4 1044 aa14.52□□□□□ -0.09
VPS9D1-207ENST00000568691 SNX27Q96L92 541 aa14.52□□□□□ -0.09
VPS9D1-207ENST00000568691 SPATC1LQ9H0A9 340 aa14.52□□□□□ -0.09
VPS9D1-207ENST00000568691 RAI14Q9P0K7 980 aa14.52□□□□□ -0.09
VPS9D1-207ENST00000568691 A0A0G2JMZ2 1700 aa14.52□□□□□ -0.09
VPS9D1-207ENST00000568691 STRNO43815 780 aa14.51□□□□□ -0.09
VPS9D1-207ENST00000568691 TLL1O43897 1013 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms