RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 PTGDRQ13258 359 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 MOGSQ13724 837 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 FAM110CQ1W6H9 321 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 MYSM1Q5VVJ2 828 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 CEP85Q6P2H3 762 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 DNAJC14Q6Y2X3 702 aaPredicted RBP5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 TTC6Q86TZ1 520 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 MAGEB6Q8N7X4 407 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 PANK1Q8TE04 598 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 PXYLP1Q8TE99 480 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 ZNF384Q8TF68 577 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 CWC22Q9HCG8 908 aaKnown RBP5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 CABP5Q9NP86 173 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 GPCPD1Q9NPB8 672 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 SAP30BPQ9UHR5 308 aaKnown RBP5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 PALD1Q9ULE6 856 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 EXOC6BQ9Y2D4 811 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 ZSWIM8A7E2V4 1837 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 TNRC18O15417 2968 aaPredicted RBP5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 MYH8P13535 1937 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 MAGEB6P1A0A0J9YX57 407 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 RLBP1P12271 317 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 GJA8P48165 433 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 FLT3LGP49771 235 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 USP14P54578 494 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 MTMR2Q13614 643 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 PDE3AQ14432 1141 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 MTFR1Q15390 333 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 CERKLQ49MI3 558 aaPredicted RBP5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 TREML2Q5T2D2 321 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 USP17L2Q6R6M4 530 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 AMOTL1Q8IY63 956 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 MIGA1Q8NAN2 632 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 GPRC5AQ8NFJ5 357 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 RHPN1Q8TCX5 695 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 ADAMTS19Q8TE59 1207 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 GTF3C2Q8WUA4 911 aaPredicted RBP5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 EAF2Q96CJ1 260 aaPredicted RBP5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 KIF1BPQ96EK5 621 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 FEZ1Q99689 392 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 WDR18Q9BV38 432 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 CRNKL1Q9BZJ0 848 aaKnown RBP5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.64□□□□□ -1.519e-7■□□□□ 9.1
HERPUD1-213ENST00000568358 ASCC2Q9H1I8 757 aaPredicted RBP5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 VRTNQ9H8Y1 702 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 GDPD2Q9HCC8 539 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 PIH1D3Q9NQM4 214 aaKnown RBP5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 SERPINB13Q9UIV8 391 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 DBNLQ9UJU6 430 aaKnown RBP5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 GABRQQ9UN88 632 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 NR2E3Q9Y5X4 410 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 FLT1P17948 1338 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 ADGRA2Q96PE1 1338 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 RFX7Q2KHR2 1363 aa5.64□□□□□ -1.51
HERPUD1-213ENST00000568358 MAST2Q6P0Q8 1798 aa5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 GLRX3O76003 335 aaKnown RBP5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 GDF11O95390 407 aa5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 SGPL1O95470 568 aa5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 SLURP2P0DP57 97 aa5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 CTGFP29279 349 aa5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 HOXA7P31268 230 aaPredicted RBP5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 SSTR3P32745 418 aaPredicted RBP5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 DYNLL1P63167 89 aaKnown RBP5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 CCNA1P78396 465 aa5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 RAB3GAP1Q15042 981 aa5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 ABCB5Q2M3G0 1257 aa5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 TUSC1Q2TAM9 212 aa5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 ARSIQ5FYB1 569 aa5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 HABP4Q5JVS0 413 aaKnown RBP5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 SLC9C2Q5TAH2 1124 aa5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 ADGRA1Q86SQ6 560 aa5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 CCDC84Q86UT8 332 aaPredicted RBP5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 TRMT44Q8IYL2 757 aaKnown RBP5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 TMC2Q8TDI7 906 aa5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 U2AF1L4Q8WU68 220 aaKnown RBP5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 SPATA32Q96LK8 384 aa5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 DNAJC2Q99543 621 aaKnown RBP5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 NUDT12Q9BQG2 462 aa5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 IL1RAPL2Q9NP60 686 aa5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 TLR7Q9NYK1 1049 aaKnown RBP5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 RCAN3Q9UKA8 241 aa5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 CENPFP49454 3210 aa5.63□□□□□ -1.51
HERPUD1-213ENST00000568358 C2orf72A6NCS6 295 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 USP17L15C9J2P7 530 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 USP17L13C9JLJ4 530 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 USP17L11C9JVI0 530 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 USP17L18D6R9N7 530 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 USP17L22D6RA61 530 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 USP17L17D6RBQ6 530 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 USP17L19D6RCP7 530 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 USP17L20D6RJB6 530 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 GOLIM4O00461 696 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 MPHOSPH10O00566 681 aaKnown RBP5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 EVI5O60447 810 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 FARP2O94887 1054 aaPredicted RBP5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 ATG7O95352 703 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 GH2P01242 217 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 HMGCRP04035 888 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms