RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 CHGBP05060 677 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 ZFYP08048 801 aaPredicted RBP5.75□□□□□ -1.49
CLK3-219ENST00000567805 CYP2D6P10635 497 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 GUCY1A2P33402 732 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 NUBP1P53384 320 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 USP17L24Q0WX57 530 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 HDAC1Q13547 482 aaPredicted RBP5.75□□□□□ -1.49
CLK3-219ENST00000567805 SEPT2Q15019 361 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 MTFR1Q15390 333 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 ZYXQ15942 572 aaKnown RBP5.75□□□□□ -1.49
CLK3-219ENST00000567805 TPRNQ4KMQ1 711 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 C12orf60Q5U649 245 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 PRPF38BQ5VTL8 546 aaKnown RBP5.75□□□□□ -1.49
CLK3-219ENST00000567805 TSHZ3Q63HK5 1081 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 GIMAP6Q6P9H5 292 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 TMEM179Q6ZVK1 233 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 C16orf86Q6ZW13 317 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 SPRYD3Q8NCJ5 442 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 GPRC5AQ8NFJ5 357 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 NKX2-3Q8TAU0 364 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 ACER1Q8TDN7 264 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 APPBP2Q92624 585 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 GCC1Q96CN9 775 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 CCDC17Q96LX7 622 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 CRBNQ96SW2 442 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 P2RX7Q99572 595 aaKnown RBP5.75□□□□□ -1.49
CLK3-219ENST00000567805 PUS7LQ9H0K6 701 aaKnown RBP5.75□□□□□ -1.49
CLK3-219ENST00000567805 OCEL1Q9H607 264 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 ARPP21Q9UBL0 812 aaPredicted RBP5.75□□□□□ -1.49
CLK3-219ENST00000567805 BIN2Q9UBW5 565 aaPredicted RBP5.75□□□□□ -1.49
CLK3-219ENST00000567805 ZBTB47Q9UFB7 747 aaPredicted RBP5.75□□□□□ -1.49
CLK3-219ENST00000567805 SLC4A4Q9Y6R1 1079 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 FRMPD3Q5JV73 1810 aa5.75□□□□□ -1.49
CLK3-219ENST00000567805 ZNF236Q9UL36 1845 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 ZNFX1Q9P2E3 1918 aaKnown RBP5.74□□□□□ -1.49
CLK3-219ENST00000567805 USP17L12C9JPN9 530 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 USP17L21D6R901 530 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 RNF113AO15541 343 aaKnown RBP5.74□□□□□ -1.49
CLK3-219ENST00000567805 INHAP05111 366 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 GJB1P08034 283 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 CCL5P13501 91 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 ELNP15502 786 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 CAPN2P17655 700 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 GNAT2P19087 354 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 VCAM1P19320 739 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 MX1P20591 662 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 MAPK4P31152 587 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 GJA8P48165 433 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 CDK8P49336 464 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 ERVK-9P63128 1117 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 ERVK-24P63145 666 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 SBK1Q52WX2 424 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 CTR9Q6PD62 1173 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 LBX2Q6XYB7 198 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 CATSPERGQ6ZRH7 1159 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 SLC44A5Q8NCS7 719 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 PI4K2BQ8TCG2 481 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 SOCS4Q8WXH5 440 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 LPAR1Q92633 364 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 OSBP2Q969R2 916 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 DYNLL2Q96FJ2 89 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 STRBPQ96SI9 672 aaKnown RBP5.74□□□□□ -1.49
CLK3-219ENST00000567805 RNF208Q9H0X6 261 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 RPAP3Q9H6T3 665 aaPredicted RBP5.74□□□□□ -1.49
CLK3-219ENST00000567805 SH2D4AQ9H788 454 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 ARHGEF10LQ9HCE6 1279 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 TXNRD2Q9NNW7 524 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.74□□□□□ -1.49
CLK3-219ENST00000567805 RBPJLQ9UBG7 517 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 GJD2Q9UKL4 321 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 RABGAP1Q9Y3P9 1069 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 SALL3Q9BXA9 1300 aa5.74□□□□□ -1.49
CLK3-219ENST00000567805 PLXNA1Q9UIW2 1896 aa5.73□□□□□ -1.49
CLK3-219ENST00000567805 ROBO3Q96MS0 1386 aa5.73□□□□□ -1.49
CLK3-219ENST00000567805 CYP2D7A0A087X1C5 515 aa5.73□□□□□ -1.49
CLK3-219ENST00000567805 A0A1W2PRG0 241 aa5.73□□□□□ -1.49
CLK3-219ENST00000567805 GSG1L2A8MUP6 293 aa5.73□□□□□ -1.49
CLK3-219ENST00000567805 GPAA1O43292 621 aa5.73□□□□□ -1.49
CLK3-219ENST00000567805 HMGCRP04035 888 aa5.73□□□□□ -1.49
CLK3-219ENST00000567805 XRCC5P13010 732 aaKnown RBP5.73□□□□□ -1.49
CLK3-219ENST00000567805 AKR1B1P15121 316 aa5.73□□□□□ -1.49
CLK3-219ENST00000567805 CCNA1P78396 465 aa5.73□□□□□ -1.49
CLK3-219ENST00000567805 ICA1Q05084 483 aa5.73□□□□□ -1.49
CLK3-219ENST00000567805 Q3C1V9 767 aa5.73□□□□□ -1.49
CLK3-219ENST00000567805 ANKRD45Q5TZF3 282 aa5.73□□□□□ -1.49
CLK3-219ENST00000567805 CCAR1Q8IX12 1150 aaKnown RBP5.73□□□□□ -1.49
CLK3-219ENST00000567805 TRMT44Q8IYL2 757 aaKnown RBP5.73□□□□□ -1.49
CLK3-219ENST00000567805 OTUD7AQ8TE49 926 aaPredicted RBP5.73□□□□□ -1.49
CLK3-219ENST00000567805 SHISA4Q96DD7 197 aa5.73□□□□□ -1.49
CLK3-219ENST00000567805 NUDT12Q9BQG2 462 aa5.73□□□□□ -1.49
CLK3-219ENST00000567805 PAGR1Q9BTK6 254 aa5.73□□□□□ -1.49
CLK3-219ENST00000567805 FSD1Q9BTV5 496 aa5.73□□□□□ -1.49
CLK3-219ENST00000567805 UNC93B1Q9H1C4 597 aa5.73□□□□□ -1.49
CLK3-219ENST00000567805 KANSL2Q9H9L4 492 aa5.73□□□□□ -1.49
CLK3-219ENST00000567805 PAK6Q9NQU5 681 aaPredicted RBP5.73□□□□□ -1.49
CLK3-219ENST00000567805 TMX2Q9Y320 296 aa5.73□□□□□ -1.49
CLK3-219ENST00000567805 ALPK3Q96L96 1907 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 SPDYE16A6NNV3 312 aaPredicted RBP5.72□□□□□ -1.49
CLK3-219ENST00000567805 MINDY4BA8MYZ0 360 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 PATL2C9JE40 543 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms