RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 PLA2G4DQ86XP0 818 aa13.76□□□□□ -0.21
CSPG4P13-202ENST00000567704 CMTR1Q8N1G2 835 aaKnown RBP13.76□□□□□ -0.21
CSPG4P13-202ENST00000567704 ASIC3Q9UHC3 531 aa13.76□□□□□ -0.21
CSPG4P13-202ENST00000567704 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.76□□□□□ -0.21
CSPG4P13-202ENST00000567704 ABCA9Q8IUA7 1624 aa13.76□□□□□ -0.21
CSPG4P13-202ENST00000567704 FAM170AA1A519 330 aa13.76□□□□□ -0.21
CSPG4P13-202ENST00000567704 HOXB7P09629 217 aa13.76□□□□□ -0.21
CSPG4P13-202ENST00000567704 FYB2Q5VWT5 728 aa13.76□□□□□ -0.21
CSPG4P13-202ENST00000567704 LINC00301Q8NCQ3 95 aa13.76□□□□□ -0.21
CSPG4P13-202ENST00000567704 RRP36Q96EU6 259 aaKnown RBP13.76□□□□□ -0.21
CSPG4P13-202ENST00000567704 KCNF1Q9H3M0 494 aa13.76□□□□□ -0.21
CSPG4P13-202ENST00000567704 PLCB1Q9NQ66 1216 aa13.76□□□□□ -0.21
CSPG4P13-202ENST00000567704 BABAM1Q9NWV8 329 aa13.76□□□□□ -0.21
CSPG4P13-202ENST00000567704 HSPD1P10809 573 aaKnown RBP13.76□□□□□ -0.21
CSPG4P13-202ENST00000567704 TXKP42681 527 aa13.76□□□□□ -0.21
CSPG4P13-202ENST00000567704 CCDC152Q4G0S7 254 aa13.76□□□□□ -0.21
CSPG4P13-202ENST00000567704 VPS52Q8N1B4 723 aa13.76□□□□□ -0.21
CSPG4P13-202ENST00000567704 UHMK1Q8TAS1 419 aaKnown RBP13.76□□□□□ -0.21
CSPG4P13-202ENST00000567704 ADGBQ8N7X0 1667 aa13.76□□□□□ -0.21
CSPG4P13-202ENST00000567704 RPL13P26373 211 aaKnown RBP13.75□□□□□ -0.21
CSPG4P13-202ENST00000567704 HOXC9P31274 260 aa13.75□□□□□ -0.21
CSPG4P13-202ENST00000567704 RESTQ13127 1097 aa13.75□□□□□ -0.21
CSPG4P13-202ENST00000567704 SF3B2Q13435 895 aaKnown RBP13.75□□□□□ -0.21
CSPG4P13-202ENST00000567704 GCKRQ14397 625 aa13.75□□□□□ -0.21
CSPG4P13-202ENST00000567704 NCAPH2Q6IBW4 605 aa13.75□□□□□ -0.21
CSPG4P13-202ENST00000567704 DPH5Q9H2P9 285 aa13.75□□□□□ -0.21
CSPG4P13-202ENST00000567704 CETN3O15182 167 aa13.75□□□□□ -0.21
CSPG4P13-202ENST00000567704 FAM13AO94988 1023 aa13.75□□□□□ -0.21
CSPG4P13-202ENST00000567704 CYP21A2P08686 494 aa13.75□□□□□ -0.21
CSPG4P13-202ENST00000567704 ZAP70P43403 619 aa13.75□□□□□ -0.21
CSPG4P13-202ENST00000567704 COPB1P53618 953 aaKnown RBP13.75□□□□□ -0.21
CSPG4P13-202ENST00000567704 MYO1AQ9UBC5 1043 aa13.75□□□□□ -0.21
CSPG4P13-202ENST00000567704 ADCY9O60503 1353 aa13.75□□□□□ -0.21
CSPG4P13-202ENST00000567704 STX2P32856 288 aa13.75□□□□□ -0.21
CSPG4P13-202ENST00000567704 MUM1Q2TAK8 710 aa13.75□□□□□ -0.21
CSPG4P13-202ENST00000567704 APBA1Q02410 837 aa13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 PLS1Q14651 629 aa13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 ANKRD7Q92527 254 aa13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 FAM89AQ96GI7 184 aa13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 FAM114A2Q9NRY5 505 aa13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 SAMSN1Q9NSI8 373 aaKnown RBP13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 POLR3EQ9NVU0 708 aa13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 HECW2Q9P2P5 1572 aa13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 KRT28Q7Z3Y7 464 aa13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 CCDC105Q8IYK2 499 aa13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 STAG1Q8WVM7 1258 aa13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 GBP5Q96PP8 586 aa13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 KRIT1O00522 736 aa13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 SEPT6Q14141 434 aa13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 ZNF365Q70YC5 407 aa13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 ZNF589Q86UQ0 364 aaPredicted RBP13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 SLF2Q8IX21 1173 aa13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 BICD1Q96G01 975 aa13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 KLHL14Q9P2G3 628 aa13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 H7C1D1 291 aa13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 TRIM66O15016 1216 aa13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 CYP2E1P05181 493 aaPredicted RBP13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 RBBP5Q15291 538 aaKnown RBP13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 C19orf44Q9H6X5 657 aa13.74□□□□□ -0.21
CSPG4P13-202ENST00000567704 CCNT1O60563 726 aaKnown RBP13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 FLOT1O75955 427 aa13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 EPHB4P54760 987 aa13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 C2orf54Q08AI8 447 aa13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 HHATQ5VTY9 493 aa13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 SMYD4Q8IYR2 804 aaPredicted RBP13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 UBL4BQ8N7F7 174 aa13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 PGBD1Q96JS3 809 aa13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 RAB17Q9H0T7 212 aa13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 HOMER3Q9NSC5 361 aa13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 TBC1D7Q9P0N9 293 aa13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 CTTNBP2NLQ9P2B4 639 aa13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 FAM169AQ9Y6X4 670 aa13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 NELFCDQ8IXH7 590 aa13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 GRAMD1CQ8IYS0 662 aa13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 IRS4O14654 1257 aaPredicted RBP13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 EPB41P11171 864 aaKnown RBP13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 ERCC5P28715 1186 aaPredicted RBP13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 CYP2C19P33261 490 aa13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 IFNAR2P48551 515 aa13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 NNTQ13423 1086 aa13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 PPP4R3AQ6IN85 833 aa13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 TSNARE1Q96NA8 513 aa13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 KRT12Q99456 494 aa13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 EHMT1Q9H9B1 1298 aa13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 EPB41L5Q9HCM4 733 aa13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 TPX2Q9ULW0 747 aaKnown RBP13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 TXNDC9O14530 226 aa13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 FERP16591 822 aa13.73□□□□□ -0.21
CSPG4P13-202ENST00000567704 CDC42BPAQ5VT25 1732 aa13.72□□□□□ -0.21
CSPG4P13-202ENST00000567704 CARMIL3Q8ND23 1372 aa13.72□□□□□ -0.21
CSPG4P13-202ENST00000567704 KDM6BO15054 1643 aa13.72□□□□□ -0.21
CSPG4P13-202ENST00000567704 KRT15P19012 456 aa13.72□□□□□ -0.21
CSPG4P13-202ENST00000567704 EIF4A1P60842 406 aaKnown RBP13.72□□□□□ -0.21
CSPG4P13-202ENST00000567704 HERC4Q5GLZ8 1057 aaPredicted RBP13.72□□□□□ -0.21
CSPG4P13-202ENST00000567704 RAB3IL1Q8TBN0 382 aa13.72□□□□□ -0.21
CSPG4P13-202ENST00000567704 SYNCQ9H7C4 482 aa13.72□□□□□ -0.21
CSPG4P13-202ENST00000567704 ATP2A2P16615 1042 aaKnown RBP13.72□□□□□ -0.21
CSPG4P13-202ENST00000567704 SESN3P58005 492 aa13.72□□□□□ -0.21
CSPG4P13-202ENST00000567704 EHHADHQ08426 723 aa13.72□□□□□ -0.21
CSPG4P13-202ENST00000567704 CCDC62Q6P9F0 684 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms