RNA–Protein interactions for RNA: ENST00000567133.1

CNOT1-210, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-210ENST00000567133 ZNF444Q8N0Y2 327 aaPredicted RBP13.1□□□□□ -0.31
CNOT1-210ENST00000567133 CHMP4CQ96CF2 233 aa13.1□□□□□ -0.31
CNOT1-210ENST00000567133 C12orf42Q96LP6 360 aa13.1□□□□□ -0.31
CNOT1-210ENST00000567133 RBPJLQ9UBG7 517 aa13.1□□□□□ -0.31
CNOT1-210ENST00000567133 PPARAQ07869 468 aa13.09□□□□□ -0.31
CNOT1-210ENST00000567133 NMIQ13287 307 aaPredicted RBP13.09□□□□□ -0.31
CNOT1-210ENST00000567133 POTEEQ6S8J3 1075 aa13.09□□□□□ -0.31
CNOT1-210ENST00000567133 PORCNQ9H237 461 aa13.09□□□□□ -0.31
CNOT1-210ENST00000567133 KANSL2Q9H9L4 492 aa13.09□□□□□ -0.31
CNOT1-210ENST00000567133 MORF4L1Q9UBU8 362 aa13.09□□□□□ -0.31
CNOT1-210ENST00000567133 HTTP42858 3142 aa13.09□□□□□ -0.31
CNOT1-210ENST00000567133 FLOT1O75955 427 aa13.08□□□□□ -0.32
CNOT1-210ENST00000567133 SLC3A2P08195 630 aaKnown RBP13.08□□□□□ -0.32
CNOT1-210ENST00000567133 CCL5P13501 91 aa13.08□□□□□ -0.32
CNOT1-210ENST00000567133 CYP2B6P20813 491 aa13.08□□□□□ -0.32
CNOT1-210ENST00000567133 UBXN2AP68543 259 aa13.08□□□□□ -0.32
CNOT1-210ENST00000567133 CTDSPL2Q05D32 466 aa13.08□□□□□ -0.32
CNOT1-210ENST00000567133 PLS1Q14651 629 aa13.08□□□□□ -0.32
CNOT1-210ENST00000567133 FAM47AQ5JRC9 791 aa13.08□□□□□ -0.32
CNOT1-210ENST00000567133 SLAIN1Q8ND83 568 aa13.08□□□□□ -0.32
CNOT1-210ENST00000567133 RNF208Q9H0X6 261 aa13.08□□□□□ -0.32
CNOT1-210ENST00000567133 SH2D4AQ9H788 454 aa13.08□□□□□ -0.32
CNOT1-210ENST00000567133 INCENPQ9NQS7 918 aa13.08□□□□□ -0.32
CNOT1-210ENST00000567133 ISY1Q9ULR0 285 aaKnown RBP13.08□□□□□ -0.32
CNOT1-210ENST00000567133 TMX2Q9Y320 296 aa13.08□□□□□ -0.32
CNOT1-210ENST00000567133 ROBO3Q96MS0 1386 aa13.07□□□□□ -0.32
CNOT1-210ENST00000567133 SPDYE16A6NNV3 312 aaPredicted RBP13.07□□□□□ -0.32
CNOT1-210ENST00000567133 CNMDO75829 334 aa13.07□□□□□ -0.32
CNOT1-210ENST00000567133 INHAP05111 366 aa13.07□□□□□ -0.32
CNOT1-210ENST00000567133 TSPY3P0CV98 308 aa13.07□□□□□ -0.32
CNOT1-210ENST00000567133 TSPY8P0CW00 308 aa13.07□□□□□ -0.32
CNOT1-210ENST00000567133 PDE4BQ07343 736 aa13.07□□□□□ -0.32
CNOT1-210ENST00000567133 MCMDC2Q4G0Z9 681 aa13.07□□□□□ -0.32
CNOT1-210ENST00000567133 ZNF589Q86UQ0 364 aaPredicted RBP13.07□□□□□ -0.32
CNOT1-210ENST00000567133 GTF3C2Q8WUA4 911 aaPredicted RBP13.07□□□□□ -0.32
CNOT1-210ENST00000567133 NUP88Q99567 741 aaPredicted RBP13.07□□□□□ -0.32
CNOT1-210ENST00000567133 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.07□□□□□ -0.32
CNOT1-210ENST00000567133 UNC93B1Q9H1C4 597 aa13.07□□□□□ -0.32
CNOT1-210ENST00000567133 VCPKMTQ9H867 229 aa13.07□□□□□ -0.32
CNOT1-210ENST00000567133 ZNF287Q9HBT7 754 aa13.07□□□□□ -0.32
CNOT1-210ENST00000567133 GOPCQ9HD26 462 aa13.07□□□□□ -0.32
CNOT1-210ENST00000567133 HELLSQ9NRZ9 838 aa13.07□□□□□ -0.32
CNOT1-210ENST00000567133 TOMM22Q9NS69 142 aa13.07□□□□□ -0.32
CNOT1-210ENST00000567133 BTBD7Q9P203 1132 aa13.07□□□□□ -0.32
CNOT1-210ENST00000567133 CLIP2Q9UDT6 1046 aa13.07□□□□□ -0.32
CNOT1-210ENST00000567133 RABGAP1Q9Y3P9 1069 aa13.07□□□□□ -0.32
CNOT1-210ENST00000567133 MYH4Q9Y623 1939 aa13.06□□□□□ -0.32
CNOT1-210ENST00000567133 FOXP2O15409 715 aa13.06□□□□□ -0.32
CNOT1-210ENST00000567133 SDSP20132 328 aa13.06□□□□□ -0.32
CNOT1-210ENST00000567133 PDE4AP27815 886 aa13.06□□□□□ -0.32
CNOT1-210ENST00000567133 MAPK4P31152 587 aa13.06□□□□□ -0.32
CNOT1-210ENST00000567133 CCNA1P78396 465 aa13.06□□□□□ -0.32
CNOT1-210ENST00000567133 TFAP4Q01664 338 aa13.06□□□□□ -0.32
CNOT1-210ENST00000567133 TRIM32Q13049 653 aa13.06□□□□□ -0.32
CNOT1-210ENST00000567133 COG2Q14746 738 aa13.06□□□□□ -0.32
CNOT1-210ENST00000567133 RRP12Q5JTH9 1297 aaKnown RBP13.06□□□□□ -0.32
CNOT1-210ENST00000567133 FAM83BQ5T0W9 1011 aa13.06□□□□□ -0.32
CNOT1-210ENST00000567133 GPR142Q7Z601 462 aa13.06□□□□□ -0.32
CNOT1-210ENST00000567133 PLEKHH3Q7Z736 793 aa13.06□□□□□ -0.32
CNOT1-210ENST00000567133 LRRC47Q8N1G4 583 aaKnown RBP13.06□□□□□ -0.32
CNOT1-210ENST00000567133 LPAR1Q92633 364 aa13.06□□□□□ -0.32
CNOT1-210ENST00000567133 ATG4CQ96DT6 458 aa13.06□□□□□ -0.32
CNOT1-210ENST00000567133 NUDT12Q9BQG2 462 aa13.06□□□□□ -0.32
CNOT1-210ENST00000567133 DIAPH3Q9NSV4 1193 aa13.06□□□□□ -0.32
CNOT1-210ENST00000567133 RBBP6Q7Z6E9 1792 aaKnown RBP13.06□□□□□ -0.32
CNOT1-210ENST00000567133 PLXNB2O15031 1838 aa13.06□□□□□ -0.32
CNOT1-210ENST00000567133 WDR46O15213 610 aaKnown RBP13.05□□□□□ -0.32
CNOT1-210ENST00000567133 SLC4A3P48751 1232 aa13.05□□□□□ -0.32
CNOT1-210ENST00000567133 HAND2P61296 217 aa13.05□□□□□ -0.32
CNOT1-210ENST00000567133 IRF5Q13568 498 aa13.05□□□□□ -0.32
CNOT1-210ENST00000567133 CWC27Q6UX04 472 aaKnown RBP13.05□□□□□ -0.32
CNOT1-210ENST00000567133 PPP4R3CPQ6ZMV5 832 aa13.05□□□□□ -0.32
CNOT1-210ENST00000567133 CEP95Q96GE4 821 aa13.05□□□□□ -0.32
CNOT1-210ENST00000567133 FBXO28Q9NVF7 368 aa13.05□□□□□ -0.32
CNOT1-210ENST00000567133 HOXC10Q9NYD6 342 aa13.05□□□□□ -0.32
CNOT1-210ENST00000567133 GJD2Q9UKL4 321 aa13.05□□□□□ -0.32
CNOT1-210ENST00000567133 MTMR7Q9Y216 660 aa13.05□□□□□ -0.32
CNOT1-210ENST00000567133 CCDC171Q6TFL3 1326 aa13.05□□□□□ -0.32
CNOT1-210ENST00000567133 CENPFP49454 3210 aa13.04□□□□□ -0.32
CNOT1-210ENST00000567133 GREB1LQ9C091 1923 aaPredicted RBP13.04□□□□□ -0.32
CNOT1-210ENST00000567133 TSPY2A6NKD2 308 aa13.04□□□□□ -0.32
CNOT1-210ENST00000567133 RANBP6O60518 1105 aaKnown RBP13.04□□□□□ -0.32
CNOT1-210ENST00000567133 DSG3P32926 999 aa13.04□□□□□ -0.32
CNOT1-210ENST00000567133 SOCS4Q8WXH5 440 aa13.04□□□□□ -0.32
CNOT1-210ENST00000567133 IVNS1ABPQ9Y6Y0 642 aa13.04□□□□□ -0.32
CNOT1-210ENST00000567133 NMT2O60551 498 aa13.03□□□□□ -0.32
CNOT1-210ENST00000567133 NDUFB10O96000 172 aa13.03□□□□□ -0.32
CNOT1-210ENST00000567133 FGAP02671 866 aa13.03□□□□□ -0.32
CNOT1-210ENST00000567133 HMGCRP04035 888 aa13.03□□□□□ -0.32
CNOT1-210ENST00000567133 HSPD1P10809 573 aaKnown RBP13.03□□□□□ -0.32
CNOT1-210ENST00000567133 CCL14Q16627 93 aa13.03□□□□□ -0.32
CNOT1-210ENST00000567133 NCAPG2Q86XI2 1143 aa13.03□□□□□ -0.32
CNOT1-210ENST00000567133 PXYLP1Q8TE99 480 aa13.03□□□□□ -0.32
CNOT1-210ENST00000567133 TRIB2Q92519 343 aa13.03□□□□□ -0.32
CNOT1-210ENST00000567133 DEFB118Q96PH6 123 aa13.03□□□□□ -0.32
CNOT1-210ENST00000567133 MOV10L1Q9BXT6 1211 aaKnown RBP13.03□□□□□ -0.32
CNOT1-210ENST00000567133 OSBPL3Q9H4L5 887 aa13.03□□□□□ -0.32
CNOT1-210ENST00000567133 MTMR4Q9NYA4 1195 aa13.03□□□□□ -0.32
CNOT1-210ENST00000567133 NYAP2Q9P242 653 aa13.03□□□□□ -0.32
CNOT1-210ENST00000567133 TACC3Q9Y6A5 838 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms