RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 USP17L17D6RBQ6 530 aa30.86■■■□□ 2.53
NME3-209ENST00000566600 USP17L19D6RCP7 530 aa30.86■■■□□ 2.53
NME3-209ENST00000566600 USP17L20D6RJB6 530 aa30.86■■■□□ 2.53
NME3-209ENST00000566600 CYP21A2P08686 494 aa30.86■■■□□ 2.53
NME3-209ENST00000566600 CYP2C8P10632 490 aa30.86■■■□□ 2.53
NME3-209ENST00000566600 IRX3P78415 501 aaPredicted RBP30.86■■■□□ 2.53
NME3-209ENST00000566600 USP17L24Q0WX57 530 aa30.86■■■□□ 2.53
NME3-209ENST00000566600 SMCR8Q8TEV9 937 aaPredicted RBP30.86■■■□□ 2.53
NME3-209ENST00000566600 NEDD4P46934 1319 aa30.86■■■□□ 2.53
NME3-209ENST00000566600 FKTNO75072 461 aa30.85■■■□□ 2.53
NME3-209ENST00000566600 TRDNQ13061 729 aa30.85■■■□□ 2.53
NME3-209ENST00000566600 ASCC2Q9H1I8 757 aaPredicted RBP30.85■■■□□ 2.53
NME3-209ENST00000566600 ADGRA2Q96PE1 1338 aa30.84■■■□□ 2.53
NME3-209ENST00000566600 CCDC178Q5BJE1 867 aa30.84■■■□□ 2.53
NME3-209ENST00000566600 ZNF296Q8WUU4 475 aaPredicted RBP30.84■■■□□ 2.53
NME3-209ENST00000566600 IL17RBQ9NRM6 502 aa30.84■■■□□ 2.53
NME3-209ENST00000566600 STX8Q9UNK0 236 aa30.84■■■□□ 2.53
NME3-209ENST00000566600 RPAP3Q9H6T3 665 aaPredicted RBP30.83■■■□□ 2.53
NME3-209ENST00000566600 WDR46O15213 610 aaKnown RBP30.82■■■□□ 2.52
NME3-209ENST00000566600 KDM4AO75164 1064 aa30.82■■■□□ 2.52
NME3-209ENST00000566600 REC8O95072 547 aa30.82■■■□□ 2.52
NME3-209ENST00000566600 GCLCP48506 637 aaPredicted RBP30.82■■■□□ 2.52
NME3-209ENST00000566600 SP3Q02447 781 aa30.82■■■□□ 2.52
NME3-209ENST00000566600 C17orf99Q6UX52 265 aa30.82■■■□□ 2.52
NME3-209ENST00000566600 CATSPERGQ6ZRH7 1159 aa30.82■■■□□ 2.52
NME3-209ENST00000566600 IQCA1Q86XH1 822 aa30.82■■■□□ 2.52
NME3-209ENST00000566600 MYH4Q9Y623 1939 aa30.81■■■□□ 2.52
NME3-209ENST00000566600 B4E1Z4 1266 aa30.81■■■□□ 2.52
NME3-209ENST00000566600 NOVP48745 357 aa30.81■■■□□ 2.52
NME3-209ENST00000566600 RNF20Q5VTR2 975 aa30.81■■■□□ 2.52
NME3-209ENST00000566600 GTF3C2Q8WUA4 911 aaPredicted RBP30.81■■■□□ 2.52
NME3-209ENST00000566600 TTC14Q96N46 770 aa30.81■■■□□ 2.52
NME3-209ENST00000566600 CPA4Q9UI42 421 aa30.81■■■□□ 2.52
NME3-209ENST00000566600 F5H6K3 240 aa30.8■■■□□ 2.52
NME3-209ENST00000566600 RAD21O60216 631 aa30.8■■■□□ 2.52
NME3-209ENST00000566600 NMT2O60551 498 aa30.8■■■□□ 2.52
NME3-209ENST00000566600 KLRC3Q07444 240 aa30.8■■■□□ 2.52
NME3-209ENST00000566600 NECTIN1Q15223 517 aa30.8■■■□□ 2.52
NME3-209ENST00000566600 SPICE1Q8N0Z3 855 aa30.8■■■□□ 2.52
NME3-209ENST00000566600 GMCL1P1Q8NEA9 526 aa30.8■■■□□ 2.52
NME3-209ENST00000566600 E7EWF7 191 aa30.79■■■□□ 2.52
NME3-209ENST00000566600 KIAA1755Q5JYT7 1200 aa30.79■■■□□ 2.52
NME3-209ENST00000566600 RALYLQ86SE5 291 aaKnown RBP30.79■■■□□ 2.52
NME3-209ENST00000566600 ERO1AQ96HE7 468 aa30.79■■■□□ 2.52
NME3-209ENST00000566600 P2RX7Q99572 595 aaKnown RBP30.79■■■□□ 2.52
NME3-209ENST00000566600 TANGO6Q9C0B7 1094 aa30.79■■■□□ 2.52
NME3-209ENST00000566600 CASP8AP2Q9UKL3 1982 aa30.78■■■□□ 2.52
NME3-209ENST00000566600 SLC27A2O14975 620 aa30.78■■■□□ 2.52
NME3-209ENST00000566600 BCRP11274 1271 aa30.78■■■□□ 2.52
NME3-209ENST00000566600 HERVK_113P62684 666 aa30.78■■■□□ 2.52
NME3-209ENST00000566600 CREB3L3Q68CJ9 461 aa30.78■■■□□ 2.52
NME3-209ENST00000566600 LRRC47Q8N1G4 583 aaKnown RBP30.78■■■□□ 2.52
NME3-209ENST00000566600 NCOA7Q8NI08 942 aa30.78■■■□□ 2.52
NME3-209ENST00000566600 ZSWIM5Q9P217 1185 aa30.78■■■□□ 2.52
NME3-209ENST00000566600 TOP1P11387 765 aaKnown RBP30.77■■■□□ 2.52
NME3-209ENST00000566600 KIF22Q14807 665 aa30.77■■■□□ 2.52
NME3-209ENST00000566600 ARHGEF6Q15052 776 aa30.77■■■□□ 2.52
NME3-209ENST00000566600 HOXC10Q9NYD6 342 aa30.77■■■□□ 2.52
NME3-209ENST00000566600 EPB41L2O43491 1005 aaKnown RBP30.76■■■□□ 2.51
NME3-209ENST00000566600 NDUFB10O96000 172 aa30.76■■■□□ 2.51
NME3-209ENST00000566600 COG2Q14746 738 aa30.76■■■□□ 2.51
NME3-209ENST00000566600 DGKHQ86XP1 1220 aa30.76■■■□□ 2.51
NME3-209ENST00000566600 ZSCAN10Q96SZ4 725 aaPredicted RBP30.76■■■□□ 2.51
NME3-209ENST00000566600 UBAC1Q9BSL1 405 aa30.76■■■□□ 2.51
NME3-209ENST00000566600 EIF5BO60841 1220 aaKnown RBP30.75■■■□□ 2.51
NME3-209ENST00000566600 FAM110CQ1W6H9 321 aa30.75■■■□□ 2.51
NME3-209ENST00000566600 SLFN13Q68D06 897 aa30.75■■■□□ 2.51
NME3-209ENST00000566600 MYPNQ86TC9 1320 aa30.74■■■□□ 2.51
NME3-209ENST00000566600 LBX2Q6XYB7 198 aa30.74■■■□□ 2.51
NME3-209ENST00000566600 ANKRD13CQ8N6S4 541 aa30.74■■■□□ 2.51
NME3-209ENST00000566600 NKX2-3Q8TAU0 364 aa30.74■■■□□ 2.51
NME3-209ENST00000566600 TMEM47Q9BQJ4 181 aa30.74■■■□□ 2.51
NME3-209ENST00000566600 ZKSCAN3Q9BRR0 538 aa30.74■■■□□ 2.51
NME3-209ENST00000566600 TAF6LQ9Y6J9 622 aa30.74■■■□□ 2.51
NME3-209ENST00000566600 FLOT1O75955 427 aa30.73■■■□□ 2.51
NME3-209ENST00000566600 ZKSCAN1P17029 563 aaPredicted RBP30.73■■■□□ 2.51
NME3-209ENST00000566600 LACTBP83111 547 aaPredicted RBP30.73■■■□□ 2.51
NME3-209ENST00000566600 FAM83BQ5T0W9 1011 aa30.73■■■□□ 2.51
NME3-209ENST00000566600 RCSD1Q6JBY9 416 aa30.73■■■□□ 2.51
NME3-209ENST00000566600 STOX1Q6ZVD7 989 aa30.73■■■□□ 2.51
NME3-209ENST00000566600 GMCL1Q96IK5 515 aa30.73■■■□□ 2.51
NME3-209ENST00000566600 MORF4L1Q9UBU8 362 aa30.73■■■□□ 2.51
NME3-209ENST00000566600 GTF3C3Q9Y5Q9 886 aa30.73■■■□□ 2.51
NME3-209ENST00000566600 CD99L2Q8TCZ2 262 aa30.72■■■□□ 2.51
NME3-209ENST00000566600 ANKS1AQ92625 1134 aa30.72■■■□□ 2.51
NME3-209ENST00000566600 RABGAP1Q9Y3P9 1069 aa30.72■■■□□ 2.51
NME3-209ENST00000566600 SART3Q15020 963 aaKnown RBP30.71■■■□□ 2.51
NME3-209ENST00000566600 CTU1Q7Z7A3 348 aaKnown RBP30.71■■■□□ 2.51
NME3-209ENST00000566600 TNKSO95271 1327 aa30.71■■■□□ 2.51
NME3-209ENST00000566600 SPDYE16A6NNV3 312 aaPredicted RBP30.7■■■□□ 2.51
NME3-209ENST00000566600 BMP3P12645 472 aa30.7■■■□□ 2.51
NME3-209ENST00000566600 DSG3P32926 999 aa30.7■■■□□ 2.51
NME3-209ENST00000566600 SLC1A4P43007 532 aa30.7■■■□□ 2.51
NME3-209ENST00000566600 KRT32Q14532 448 aa30.7■■■□□ 2.51
NME3-209ENST00000566600 TSGA10IPQ3SY00 556 aa30.7■■■□□ 2.51
NME3-209ENST00000566600 CYB5R4Q7L1T6 521 aa30.7■■■□□ 2.51
NME3-209ENST00000566600 MB21D1Q8N884 522 aa30.7■■■□□ 2.51
NME3-209ENST00000566600 ENAHQ8N8S7 591 aaPredicted RBP30.7■■■□□ 2.51
NME3-209ENST00000566600 GPRC5AQ8NFJ5 357 aa30.7■■■□□ 2.51
NME3-209ENST00000566600 NUP88Q99567 741 aaPredicted RBP30.7■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms