RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 ZNF236Q9UL36 1845 aa22.76■■□□□ 1.23
ABCA3-204ENST00000566200 SLC15A5A6NIM6 579 aa22.76■■□□□ 1.23
ABCA3-204ENST00000566200 MPHOSPH10O00566 681 aaKnown RBP22.76■■□□□ 1.23
ABCA3-204ENST00000566200 ATP5JP18859 108 aa22.76■■□□□ 1.23
ABCA3-204ENST00000566200 GRB14Q14449 540 aa22.76■■□□□ 1.23
ABCA3-204ENST00000566200 MBD4O95243 580 aa22.75■■□□□ 1.23
ABCA3-204ENST00000566200 IGHA2P01877 340 aa22.75■■□□□ 1.23
ABCA3-204ENST00000566200 HOXC6P09630 235 aa22.75■■□□□ 1.23
ABCA3-204ENST00000566200 SYN1P17600 705 aa22.75■■□□□ 1.23
ABCA3-204ENST00000566200 WDR78Q5VTH9 848 aa22.75■■□□□ 1.23
ABCA3-204ENST00000566200 CLEC10AQ8IUN9 316 aa22.75■■□□□ 1.23
ABCA3-204ENST00000566200 NPLOC4Q8TAT6 608 aa22.75■■□□□ 1.23
ABCA3-204ENST00000566200 HAUS7Q99871 368 aa22.75■■□□□ 1.23
ABCA3-204ENST00000566200 CWC22Q9HCG8 908 aaKnown RBP22.75■■□□□ 1.23
ABCA3-204ENST00000566200 CYP2D7A0A087X1C5 515 aa22.74■■□□□ 1.23
ABCA3-204ENST00000566200 GLRX3O76003 335 aaKnown RBP22.74■■□□□ 1.23
ABCA3-204ENST00000566200 BMP8BP34820 402 aa22.74■■□□□ 1.23
ABCA3-204ENST00000566200 C20orf194Q5TEA3 1177 aa22.74■■□□□ 1.23
ABCA3-204ENST00000566200 TMEM179Q6ZVK1 233 aa22.74■■□□□ 1.23
ABCA3-204ENST00000566200 AKR1B1P15121 316 aa22.73■■□□□ 1.23
ABCA3-204ENST00000566200 COG2Q14746 738 aa22.73■■□□□ 1.23
ABCA3-204ENST00000566200 LRCH3Q96II8 777 aa22.73■■□□□ 1.23
ABCA3-204ENST00000566200 MOV10L1Q9BXT6 1211 aaKnown RBP22.73■■□□□ 1.23
ABCA3-204ENST00000566200 SWAP70Q9UH65 585 aa22.73■■□□□ 1.23
ABCA3-204ENST00000566200 RCAN3Q9UKA8 241 aa22.73■■□□□ 1.23
ABCA3-204ENST00000566200 ATP8A2Q9NTI2 1148 aa22.72■■□□□ 1.23
ABCA3-204ENST00000566200 LRRC26Q2I0M4 334 aa22.71■■□□□ 1.23
ABCA3-204ENST00000566200 C12orf60Q5U649 245 aa22.71■■□□□ 1.23
ABCA3-204ENST00000566200 MFSD14CQ5VZR4 134 aa22.71■■□□□ 1.23
ABCA3-204ENST00000566200 TRPV1Q8NER1 839 aa22.71■■□□□ 1.23
ABCA3-204ENST00000566200 TANGO6Q9C0B7 1094 aa22.71■■□□□ 1.23
ABCA3-204ENST00000566200 HOXC10Q9NYD6 342 aa22.71■■□□□ 1.23
ABCA3-204ENST00000566200 TMX2Q9Y320 296 aa22.71■■□□□ 1.23
ABCA3-204ENST00000566200 IVNS1ABPQ9Y6Y0 642 aa22.71■■□□□ 1.23
ABCA3-204ENST00000566200 USP17L12C9JPN9 530 aa22.7■■□□□ 1.22
ABCA3-204ENST00000566200 USP17L21D6R901 530 aa22.7■■□□□ 1.22
ABCA3-204ENST00000566200 SMARCA5O60264 1052 aaPredicted RBP22.7■■□□□ 1.22
ABCA3-204ENST00000566200 CYP2C19P33261 490 aa22.7■■□□□ 1.22
ABCA3-204ENST00000566200 MAGEA10P43363 369 aaPredicted RBP22.7■■□□□ 1.22
ABCA3-204ENST00000566200 UBE3CQ15386 1083 aa22.7■■□□□ 1.22
ABCA3-204ENST00000566200 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.7■■□□□ 1.22
ABCA3-204ENST00000566200 SPATC1LQ9H0A9 340 aa22.7■■□□□ 1.22
ABCA3-204ENST00000566200 COL11A1P12107 1806 aaPredicted RBP22.7■■□□□ 1.22
ABCA3-204ENST00000566200 DSG3P32926 999 aa22.69■■□□□ 1.22
ABCA3-204ENST00000566200 CDK8P49336 464 aa22.69■■□□□ 1.22
ABCA3-204ENST00000566200 ATP2B2Q01814 1243 aa22.69■■□□□ 1.22
ABCA3-204ENST00000566200 SPICE1Q8N0Z3 855 aa22.69■■□□□ 1.22
ABCA3-204ENST00000566200 DDX20Q9UHI6 824 aaKnown RBP22.69■■□□□ 1.22
ABCA3-204ENST00000566200 GREB1LQ9C091 1923 aaPredicted RBP22.69■■□□□ 1.22
ABCA3-204ENST00000566200 ERCC3P19447 782 aa22.68■■□□□ 1.22
ABCA3-204ENST00000566200 ADORA2AP29274 412 aa22.68■■□□□ 1.22
ABCA3-204ENST00000566200 ICA1Q05084 483 aa22.68■■□□□ 1.22
ABCA3-204ENST00000566200 C16orf86Q6ZW13 317 aa22.68■■□□□ 1.22
ABCA3-204ENST00000566200 SHCBP1Q8NEM2 672 aa22.68■■□□□ 1.22
ABCA3-204ENST00000566200 LPAR1Q92633 364 aa22.68■■□□□ 1.22
ABCA3-204ENST00000566200 ATG4CQ96DT6 458 aa22.68■■□□□ 1.22
ABCA3-204ENST00000566200 LRRCC1Q9C099 1032 aa22.68■■□□□ 1.22
ABCA3-204ENST00000566200 PUS7LQ9H0K6 701 aaKnown RBP22.68■■□□□ 1.22
ABCA3-204ENST00000566200 VCPKMTQ9H867 229 aa22.68■■□□□ 1.22
ABCA3-204ENST00000566200 COBLO75128 1261 aa22.67■■□□□ 1.22
ABCA3-204ENST00000566200 CYBAP13498 195 aa22.67■■□□□ 1.22
ABCA3-204ENST00000566200 CCDC17Q96LX7 622 aa22.67■■□□□ 1.22
ABCA3-204ENST00000566200 CHMP4BQ9H444 224 aaKnown RBP22.67■■□□□ 1.22
ABCA3-204ENST00000566200 ARHGEF10LQ9HCE6 1279 aa22.67■■□□□ 1.22
ABCA3-204ENST00000566200 DNAH12Q6ZR08 3092 aa22.66■■□□□ 1.22
ABCA3-204ENST00000566200 CTR9Q6PD62 1173 aa22.66■■□□□ 1.22
ABCA3-204ENST00000566200 SLC4A4Q9Y6R1 1079 aa22.66■■□□□ 1.22
ABCA3-204ENST00000566200 ZNFX1Q9P2E3 1918 aaKnown RBP22.65■■□□□ 1.22
ABCA3-204ENST00000566200 STRNO43815 780 aa22.65■■□□□ 1.22
ABCA3-204ENST00000566200 FLOT1O75955 427 aa22.65■■□□□ 1.22
ABCA3-204ENST00000566200 CNGA1P29973 690 aa22.65■■□□□ 1.22
ABCA3-204ENST00000566200 OLFML2BQ68BL8 750 aa22.65■■□□□ 1.22
ABCA3-204ENST00000566200 DPP9Q86TI2 863 aa22.65■■□□□ 1.22
ABCA3-204ENST00000566200 MB21D1Q8N884 522 aa22.65■■□□□ 1.22
ABCA3-204ENST00000566200 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.65■■□□□ 1.22
ABCA3-204ENST00000566200 WDR46O15213 610 aaKnown RBP22.64■■□□□ 1.21
ABCA3-204ENST00000566200 MSCO60682 206 aa22.64■■□□□ 1.21
ABCA3-204ENST00000566200 EEF2P13639 858 aaKnown RBP22.64■■□□□ 1.21
ABCA3-204ENST00000566200 TMEM132BQ14DG7 1078 aa22.64■■□□□ 1.21
ABCA3-204ENST00000566200 SENP6Q9GZR1 1112 aaPredicted RBP22.64■■□□□ 1.21
ABCA3-204ENST00000566200 SH2D4AQ9H788 454 aa22.64■■□□□ 1.21
ABCA3-204ENST00000566200 FBXO28Q9NVF7 368 aa22.64■■□□□ 1.21
ABCA3-204ENST00000566200 ADAMTS5Q9UNA0 930 aa22.64■■□□□ 1.21
ABCA3-204ENST00000566200 PLS1Q14651 629 aa22.63■■□□□ 1.21
ABCA3-204ENST00000566200 TDHQ8IZJ6 230 aa22.63■■□□□ 1.21
ABCA3-204ENST00000566200 MROH8Q9H579 483 aa22.63■■□□□ 1.21
ABCA3-204ENST00000566200 ECHDC1Q9NTX5 307 aa22.63■■□□□ 1.21
ABCA3-204ENST00000566200 DNM1LO00429 736 aa22.62■■□□□ 1.21
ABCA3-204ENST00000566200 LRIT3Q3SXY7 679 aa22.62■■□□□ 1.21
ABCA3-204ENST00000566200 ZSCAN25Q6NSZ9 544 aa22.62■■□□□ 1.21
ABCA3-204ENST00000566200 NCAPG2Q86XI2 1143 aa22.62■■□□□ 1.21
ABCA3-204ENST00000566200 STRBPQ96SI9 672 aaKnown RBP22.62■■□□□ 1.21
ABCA3-204ENST00000566200 UBE2OQ9C0C9 1292 aaKnown RBP22.62■■□□□ 1.21
ABCA3-204ENST00000566200 COL6A3P12111 3177 aa22.62■■□□□ 1.21
ABCA3-204ENST00000566200 LTBP2Q14767 1821 aa22.61■■□□□ 1.21
ABCA3-204ENST00000566200 ANO1Q5XXA6 986 aa22.61■■□□□ 1.21
ABCA3-204ENST00000566200 SAMD1Q6SPF0 538 aaPredicted RBP22.61■■□□□ 1.21
ABCA3-204ENST00000566200 AMOTL1Q8IY63 956 aa22.61■■□□□ 1.21
ABCA3-204ENST00000566200 ABRAQ8N0Z2 381 aa22.61■■□□□ 1.21
ABCA3-204ENST00000566200 DDRGK1Q96HY6 314 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms