RNA–Protein interactions for RNA: ENST00000566087.5

NSMCE1-211, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-211ENST00000566087 SH3D19Q5HYK7 790 aa12.73□□□□□ -0.37
NSMCE1-211ENST00000566087 ZMYM1Q5SVZ6 1142 aa12.73□□□□□ -0.37
NSMCE1-211ENST00000566087 USP17L2Q6R6M4 530 aa12.73□□□□□ -0.37
NSMCE1-211ENST00000566087 OSBP2Q969R2 916 aa12.73□□□□□ -0.37
NSMCE1-211ENST00000566087 RILPL2Q969X0 211 aa12.73□□□□□ -0.37
NSMCE1-211ENST00000566087 SH2D4AQ9H788 454 aa12.73□□□□□ -0.37
NSMCE1-211ENST00000566087 MKNK2Q9HBH9 465 aa12.73□□□□□ -0.37
NSMCE1-211ENST00000566087 CDK5RAP2Q96SN8 1893 aa12.73□□□□□ -0.37
NSMCE1-211ENST00000566087 PLXNB2O15031 1838 aa12.73□□□□□ -0.37
NSMCE1-211ENST00000566087 PRKAB2O43741 272 aa12.72□□□□□ -0.37
NSMCE1-211ENST00000566087 GDF11O95390 407 aa12.72□□□□□ -0.37
NSMCE1-211ENST00000566087 HMGCRP04035 888 aa12.72□□□□□ -0.37
NSMCE1-211ENST00000566087 BMP8BP34820 402 aa12.72□□□□□ -0.37
NSMCE1-211ENST00000566087 MAGEA10P43363 369 aaPredicted RBP12.72□□□□□ -0.37
NSMCE1-211ENST00000566087 GCLCP48506 637 aaPredicted RBP12.72□□□□□ -0.37
NSMCE1-211ENST00000566087 HMGCS2P54868 508 aa12.72□□□□□ -0.37
NSMCE1-211ENST00000566087 GABPAQ06546 454 aa12.72□□□□□ -0.37
NSMCE1-211ENST00000566087 PDE4BQ07343 736 aa12.72□□□□□ -0.37
NSMCE1-211ENST00000566087 RRP1BQ14684 758 aaKnown RBP12.72□□□□□ -0.37
NSMCE1-211ENST00000566087 CTR9Q6PD62 1173 aa12.72□□□□□ -0.37
NSMCE1-211ENST00000566087 TMEM179Q6ZVK1 233 aa12.72□□□□□ -0.37
NSMCE1-211ENST00000566087 PLEKHM2Q8IWE5 1019 aa12.72□□□□□ -0.37
NSMCE1-211ENST00000566087 GTF3C2Q8WUA4 911 aaPredicted RBP12.72□□□□□ -0.37
NSMCE1-211ENST00000566087 FEZ1Q99689 392 aa12.72□□□□□ -0.37
NSMCE1-211ENST00000566087 NAPBQ9H115 298 aa12.72□□□□□ -0.37
NSMCE1-211ENST00000566087 HMX1Q9NP08 348 aaPredicted RBP12.72□□□□□ -0.37
NSMCE1-211ENST00000566087 GJD2Q9UKL4 321 aa12.72□□□□□ -0.37
NSMCE1-211ENST00000566087 GSG1L2A8MUP6 293 aa12.71□□□□□ -0.37
NSMCE1-211ENST00000566087 MINDY4BA8MYZ0 360 aa12.71□□□□□ -0.37
NSMCE1-211ENST00000566087 CYP2B6P20813 491 aa12.71□□□□□ -0.37
NSMCE1-211ENST00000566087 CDK8P49336 464 aa12.71□□□□□ -0.37
NSMCE1-211ENST00000566087 IRX3P78415 501 aaPredicted RBP12.71□□□□□ -0.37
NSMCE1-211ENST00000566087 MCMDC2Q4G0Z9 681 aa12.71□□□□□ -0.37
NSMCE1-211ENST00000566087 PPP4R3BQ5MIZ7 849 aa12.71□□□□□ -0.37
NSMCE1-211ENST00000566087 C16orf86Q6ZW13 317 aa12.71□□□□□ -0.37
NSMCE1-211ENST00000566087 IFNL3Q8IZI9 196 aa12.71□□□□□ -0.37
NSMCE1-211ENST00000566087 ZNF444Q8N0Y2 327 aaPredicted RBP12.71□□□□□ -0.37
NSMCE1-211ENST00000566087 TRIB2Q92519 343 aa12.71□□□□□ -0.37
NSMCE1-211ENST00000566087 NBPF3Q9H094 633 aa12.71□□□□□ -0.37
NSMCE1-211ENST00000566087 ASCC2Q9H1I8 757 aaPredicted RBP12.71□□□□□ -0.37
NSMCE1-211ENST00000566087 C11orf49Q9H6J7 331 aa12.71□□□□□ -0.37
NSMCE1-211ENST00000566087 DNAJC18Q9H819 358 aa12.71□□□□□ -0.37
NSMCE1-211ENST00000566087 ARHGEF10LQ9HCE6 1279 aa12.71□□□□□ -0.37
NSMCE1-211ENST00000566087 UNC80Q8N2C7 3258 aa12.7□□□□□ -0.38
NSMCE1-211ENST00000566087 RPTORQ8N122 1335 aa12.7□□□□□ -0.38
NSMCE1-211ENST00000566087 CAPN2P17655 700 aa12.7□□□□□ -0.38
NSMCE1-211ENST00000566087 HOXA7P31268 230 aaPredicted RBP12.7□□□□□ -0.38
NSMCE1-211ENST00000566087 SHMT1P34896 483 aa12.7□□□□□ -0.38
NSMCE1-211ENST00000566087 MTMR2Q13614 643 aa12.7□□□□□ -0.38
NSMCE1-211ENST00000566087 ANKLE1Q8NAG6 615 aa12.7□□□□□ -0.38
NSMCE1-211ENST00000566087 KANSL2Q9H9L4 492 aa12.7□□□□□ -0.38
NSMCE1-211ENST00000566087 DIAPH3Q9NSV4 1193 aa12.7□□□□□ -0.38
NSMCE1-211ENST00000566087 SLFNL1Q499Z3 407 aa12.69□□□□□ -0.38
NSMCE1-211ENST00000566087 TDHQ8IZJ6 230 aa12.69□□□□□ -0.38
NSMCE1-211ENST00000566087 UBE2OQ9C0C9 1292 aaKnown RBP12.69□□□□□ -0.38
NSMCE1-211ENST00000566087 KIAA1683Q9H0B3 1180 aa12.69□□□□□ -0.38
NSMCE1-211ENST00000566087 PFASO15067 1338 aa12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 NAV1Q8NEY1 1877 aa12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 USP17L15C9J2P7 530 aa12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 USP17L13C9JLJ4 530 aa12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 USP17L11C9JVI0 530 aa12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 USP17L18D6R9N7 530 aa12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 USP17L22D6RA61 530 aa12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 USP17L17D6RBQ6 530 aa12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 USP17L19D6RCP7 530 aa12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 USP17L20D6RJB6 530 aa12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 M0R2C6 588 aa12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 PRKAR2AP13861 404 aaKnown RBP12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 SDSP20132 328 aa12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 USP17L24Q0WX57 530 aa12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 SHROOM1Q2M3G4 852 aaPredicted RBP12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 LRIT3Q3SXY7 679 aa12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 CCAR1Q8IX12 1150 aaKnown RBP12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 RUFY2Q8WXA3 655 aa12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 LPAR1Q92633 364 aa12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 DYNLL2Q96FJ2 89 aa12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 TXNRD2Q9NNW7 524 aa12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 MTMR10Q9NXD2 777 aa12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 HOXC10Q9NYD6 342 aa12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 OGDHLQ9ULD0 1010 aa12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 STXBP5LQ9Y2K9 1186 aa12.68□□□□□ -0.38
NSMCE1-211ENST00000566087 SIPA1L1O43166 1804 aa12.67□□□□□ -0.38
NSMCE1-211ENST00000566087 CYP2D6P10635 497 aa12.67□□□□□ -0.38
NSMCE1-211ENST00000566087 NT5C2P49902 561 aa12.67□□□□□ -0.38
NSMCE1-211ENST00000566087 JAG1P78504 1218 aa12.67□□□□□ -0.38
NSMCE1-211ENST00000566087 MDM2Q00987 491 aaPredicted RBP12.67□□□□□ -0.38
NSMCE1-211ENST00000566087 SEPT2Q15019 361 aa12.67□□□□□ -0.38
NSMCE1-211ENST00000566087 ALX1Q15699 326 aa12.67□□□□□ -0.38
NSMCE1-211ENST00000566087 GPR153Q6NV75 609 aa12.67□□□□□ -0.38
NSMCE1-211ENST00000566087 C12orf42Q96LP6 360 aa12.67□□□□□ -0.38
NSMCE1-211ENST00000566087 P2RX7Q99572 595 aaKnown RBP12.67□□□□□ -0.38
NSMCE1-211ENST00000566087 GOPCQ9HD26 462 aa12.67□□□□□ -0.38
NSMCE1-211ENST00000566087 CHGBP05060 677 aa12.66□□□□□ -0.38
NSMCE1-211ENST00000566087 PCP11498 1178 aaKnown RBP12.66□□□□□ -0.38
NSMCE1-211ENST00000566087 CCND3P30281 292 aaPredicted RBP12.66□□□□□ -0.38
NSMCE1-211ENST00000566087 CCNA1P78396 465 aa12.66□□□□□ -0.38
NSMCE1-211ENST00000566087 ICA1Q05084 483 aa12.66□□□□□ -0.38
NSMCE1-211ENST00000566087 CCL14Q16627 93 aa12.66□□□□□ -0.38
NSMCE1-211ENST00000566087 MAP3K21Q5TCX8 1036 aa12.66□□□□□ -0.38
NSMCE1-211ENST00000566087 SEC62Q99442 399 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms