RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 LSG1Q9H089 658 aaKnown RBP14.86□□□□□ -0.03
SHCBP1-204ENST00000565887 A0A1W2PRG0 241 aa14.85□□□□□ -0.03
SHCBP1-204ENST00000565887 WDR46O15213 610 aaKnown RBP14.85□□□□□ -0.03
SHCBP1-204ENST00000565887 NOVP48745 357 aa14.85□□□□□ -0.03
SHCBP1-204ENST00000565887 SP3Q02447 781 aa14.85□□□□□ -0.03
SHCBP1-204ENST00000565887 KIF22Q14807 665 aa14.85□□□□□ -0.03
SHCBP1-204ENST00000565887 CATSPERGQ6ZRH7 1159 aa14.85□□□□□ -0.03
SHCBP1-204ENST00000565887 DGKHQ86XP1 1220 aa14.85□□□□□ -0.03
SHCBP1-204ENST00000565887 SMCR8Q8TEV9 937 aaPredicted RBP14.85□□□□□ -0.03
SHCBP1-204ENST00000565887 ERO1AQ96HE7 468 aa14.85□□□□□ -0.03
SHCBP1-204ENST00000565887 RBM8AQ9Y5S9 174 aaKnown RBP14.85□□□□□ -0.03
SHCBP1-204ENST00000565887 CYP21A2P08686 494 aa14.84□□□□□ -0.03
SHCBP1-204ENST00000565887 ZKSCAN1P17029 563 aaPredicted RBP14.84□□□□□ -0.03
SHCBP1-204ENST00000565887 COG2Q14746 738 aa14.84□□□□□ -0.03
SHCBP1-204ENST00000565887 NECTIN1Q15223 517 aa14.84□□□□□ -0.03
SHCBP1-204ENST00000565887 ZYXQ15942 572 aaKnown RBP14.84□□□□□ -0.03
SHCBP1-204ENST00000565887 TREML2Q5T2D2 321 aa14.84□□□□□ -0.03
SHCBP1-204ENST00000565887 C17orf99Q6UX52 265 aa14.84□□□□□ -0.03
SHCBP1-204ENST00000565887 TBC1D10CQ8IV04 446 aa14.84□□□□□ -0.03
SHCBP1-204ENST00000565887 GMCL1P1Q8NEA9 526 aa14.84□□□□□ -0.03
SHCBP1-204ENST00000565887 NCOA7Q8NI08 942 aa14.84□□□□□ -0.03
SHCBP1-204ENST00000565887 ASCC2Q9H1I8 757 aaPredicted RBP14.84□□□□□ -0.03
SHCBP1-204ENST00000565887 INCENPQ9NQS7 918 aa14.84□□□□□ -0.03
SHCBP1-204ENST00000565887 STX8Q9UNK0 236 aa14.84□□□□□ -0.03
SHCBP1-204ENST00000565887 PTPRFP10586 1907 aa14.84□□□□□ -0.03
SHCBP1-204ENST00000565887 F5H6K3 240 aa14.83□□□□□ -0.04
SHCBP1-204ENST00000565887 GNRH1P01148 92 aa14.83□□□□□ -0.04
SHCBP1-204ENST00000565887 TOP1P11387 765 aaKnown RBP14.83□□□□□ -0.04
SHCBP1-204ENST00000565887 VCAM1P19320 739 aa14.83□□□□□ -0.04
SHCBP1-204ENST00000565887 KLRC3Q07444 240 aa14.83□□□□□ -0.04
SHCBP1-204ENST00000565887 SART3Q15020 963 aaKnown RBP14.83□□□□□ -0.04
SHCBP1-204ENST00000565887 RALYLQ86SE5 291 aaKnown RBP14.83□□□□□ -0.04
SHCBP1-204ENST00000565887 ZNF296Q8WUU4 475 aaPredicted RBP14.83□□□□□ -0.04
SHCBP1-204ENST00000565887 MTA3Q9BTC8 594 aa14.83□□□□□ -0.04
SHCBP1-204ENST00000565887 NBPF3Q9H094 633 aa14.83□□□□□ -0.04
SHCBP1-204ENST00000565887 RPAP3Q9H6T3 665 aaPredicted RBP14.83□□□□□ -0.04
SHCBP1-204ENST00000565887 IL17RBQ9NRM6 502 aa14.83□□□□□ -0.04
SHCBP1-204ENST00000565887 ZSWIM5Q9P217 1185 aa14.83□□□□□ -0.04
SHCBP1-204ENST00000565887 TSKSQ9UJT2 592 aa14.83□□□□□ -0.04
SHCBP1-204ENST00000565887 MYPNQ86TC9 1320 aa14.83□□□□□ -0.04
SHCBP1-204ENST00000565887 KDM4AO75164 1064 aa14.82□□□□□ -0.04
SHCBP1-204ENST00000565887 CYP2C8P10632 490 aa14.82□□□□□ -0.04
SHCBP1-204ENST00000565887 KRT32Q14532 448 aa14.82□□□□□ -0.04
SHCBP1-204ENST00000565887 PKN2Q16513 984 aaKnown RBP14.82□□□□□ -0.04
SHCBP1-204ENST00000565887 TSGA10IPQ3SY00 556 aa14.82□□□□□ -0.04
SHCBP1-204ENST00000565887 RCSD1Q6JBY9 416 aa14.82□□□□□ -0.04
SHCBP1-204ENST00000565887 LBX2Q6XYB7 198 aa14.82□□□□□ -0.04
SHCBP1-204ENST00000565887 MB21D1Q8N884 522 aa14.82□□□□□ -0.04
SHCBP1-204ENST00000565887 ANKS1AQ92625 1134 aa14.82□□□□□ -0.04
SHCBP1-204ENST00000565887 P2RX7Q99572 595 aaKnown RBP14.82□□□□□ -0.04
SHCBP1-204ENST00000565887 UBAC1Q9BSL1 405 aa14.82□□□□□ -0.04
SHCBP1-204ENST00000565887 TACC3Q9Y6A5 838 aa14.82□□□□□ -0.04
SHCBP1-204ENST00000565887 LOC285556D6RIA3 1793 aa14.81□□□□□ -0.04
SHCBP1-204ENST00000565887 ERICH2A1L162 156 aa14.81□□□□□ -0.04
SHCBP1-204ENST00000565887 B4E1Z4 1266 aa14.81□□□□□ -0.04
SHCBP1-204ENST00000565887 E7EWF7 191 aa14.81□□□□□ -0.04
SHCBP1-204ENST00000565887 FDX1P10109 184 aa14.81□□□□□ -0.04
SHCBP1-204ENST00000565887 BCRP11274 1271 aa14.81□□□□□ -0.04
SHCBP1-204ENST00000565887 HOXD10P28358 340 aa14.81□□□□□ -0.04
SHCBP1-204ENST00000565887 HERVK_113P62684 666 aa14.81□□□□□ -0.04
SHCBP1-204ENST00000565887 FAM110CQ1W6H9 321 aa14.81□□□□□ -0.04
SHCBP1-204ENST00000565887 CREB3L3Q68CJ9 461 aa14.81□□□□□ -0.04
SHCBP1-204ENST00000565887 TMTC2Q8N394 836 aa14.81□□□□□ -0.04
SHCBP1-204ENST00000565887 CHURC1Q8WUH1 139 aa14.81□□□□□ -0.04
SHCBP1-204ENST00000565887 GMCL1Q96IK5 515 aa14.81□□□□□ -0.04
SHCBP1-204ENST00000565887 ZSCAN10Q96SZ4 725 aaPredicted RBP14.81□□□□□ -0.04
SHCBP1-204ENST00000565887 TANGO6Q9C0B7 1094 aa14.81□□□□□ -0.04
SHCBP1-204ENST00000565887 R3HDMLQ9H3Y0 253 aa14.81□□□□□ -0.04
SHCBP1-204ENST00000565887 RABGAP1Q9Y3P9 1069 aa14.81□□□□□ -0.04
SHCBP1-204ENST00000565887 GREB1LQ9C091 1923 aaPredicted RBP14.8□□□□□ -0.04
SHCBP1-204ENST00000565887 SLC27A2O14975 620 aa14.8□□□□□ -0.04
SHCBP1-204ENST00000565887 RAD21O60216 631 aa14.8□□□□□ -0.04
SHCBP1-204ENST00000565887 HMGB1P09429 215 aaKnown RBP14.8□□□□□ -0.04
SHCBP1-204ENST00000565887 SLFN13Q68D06 897 aa14.8□□□□□ -0.04
SHCBP1-204ENST00000565887 CLEC10AQ8IUN9 316 aa14.8□□□□□ -0.04
SHCBP1-204ENST00000565887 SPICE1Q8N0Z3 855 aa14.8□□□□□ -0.04
SHCBP1-204ENST00000565887 PRPF38AQ8NAV1 312 aaKnown RBP14.8□□□□□ -0.04
SHCBP1-204ENST00000565887 GPRC5AQ8NFJ5 357 aa14.8□□□□□ -0.04
SHCBP1-204ENST00000565887 MORF4L1Q9UBU8 362 aa14.8□□□□□ -0.04
SHCBP1-204ENST00000565887 CPA4Q9UI42 421 aa14.8□□□□□ -0.04
SHCBP1-204ENST00000565887 FEM1BQ9UK73 627 aa14.8□□□□□ -0.04
SHCBP1-204ENST00000565887 NEDD4P46934 1319 aa14.8□□□□□ -0.04
SHCBP1-204ENST00000565887 ADGRA2Q96PE1 1338 aa14.8□□□□□ -0.04
SHCBP1-204ENST00000565887 LAMA4Q16363 1823 aa14.8□□□□□ -0.04
SHCBP1-204ENST00000565887 PLA2G6O60733 806 aa14.79□□□□□ -0.04
SHCBP1-204ENST00000565887 FLOT1O75955 427 aa14.79□□□□□ -0.04
SHCBP1-204ENST00000565887 NDUFB10O96000 172 aa14.79□□□□□ -0.04
SHCBP1-204ENST00000565887 MCCP23508 829 aa14.79□□□□□ -0.04
SHCBP1-204ENST00000565887 MCM5P33992 734 aa14.79□□□□□ -0.04
SHCBP1-204ENST00000565887 SLC1A4P43007 532 aa14.79□□□□□ -0.04
SHCBP1-204ENST00000565887 PRMT2P55345 433 aa14.79□□□□□ -0.04
SHCBP1-204ENST00000565887 CCNA1P78396 465 aa14.79□□□□□ -0.04
SHCBP1-204ENST00000565887 LACTBP83111 547 aaPredicted RBP14.79□□□□□ -0.04
SHCBP1-204ENST00000565887 DGKZQ13574 1117 aa14.79□□□□□ -0.04
SHCBP1-204ENST00000565887 DCAF4Q8WV16 495 aa14.79□□□□□ -0.04
SHCBP1-204ENST00000565887 TMEM47Q9BQJ4 181 aa14.79□□□□□ -0.04
SHCBP1-204ENST00000565887 NMT2O60551 498 aa14.78□□□□□ -0.04
SHCBP1-204ENST00000565887 BMP3P12645 472 aa14.78□□□□□ -0.04
SHCBP1-204ENST00000565887 DSG3P32926 999 aa14.78□□□□□ -0.04
SHCBP1-204ENST00000565887 CTU1Q7Z7A3 348 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms