RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 MYH13Q9UKX3 1938 aa13.8□□□□□ -0.2
CAPN3-215ENST00000565559 MUC6Q6W4X9 2439 aa13.8□□□□□ -0.2
CAPN3-215ENST00000565559 EYA2O00167 538 aa13.79□□□□□ -0.2
CAPN3-215ENST00000565559 PQBP1O60828 265 aaKnown RBP13.79□□□□□ -0.2
CAPN3-215ENST00000565559 MAP4K4O95819 1239 aaPredicted RBP13.79□□□□□ -0.2
CAPN3-215ENST00000565559 ADGRE1Q14246 886 aa13.79□□□□□ -0.2
CAPN3-215ENST00000565559 GRB14Q14449 540 aa13.79□□□□□ -0.2
CAPN3-215ENST00000565559 LRRC41Q15345 812 aa13.79□□□□□ -0.2
CAPN3-215ENST00000565559 RAB30Q15771 203 aa13.79□□□□□ -0.2
CAPN3-215ENST00000565559 ATP2B3Q16720 1220 aa13.79□□□□□ -0.2
CAPN3-215ENST00000565559 ANO1Q5XXA6 986 aa13.79□□□□□ -0.2
CAPN3-215ENST00000565559 DPP9Q86TI2 863 aa13.79□□□□□ -0.2
CAPN3-215ENST00000565559 ANKRD44Q8N8A2 993 aa13.79□□□□□ -0.2
CAPN3-215ENST00000565559 TRIM34Q9BYJ4 488 aa13.79□□□□□ -0.2
CAPN3-215ENST00000565559 RLFQ13129 1914 aa13.79□□□□□ -0.2
CAPN3-215ENST00000565559 GPR75-ASB3A0A0A6YYF3 556 aa13.78□□□□□ -0.2
CAPN3-215ENST00000565559 VAMP4O75379 141 aa13.78□□□□□ -0.2
CAPN3-215ENST00000565559 PBX2P40425 430 aa13.78□□□□□ -0.2
CAPN3-215ENST00000565559 RRP1BQ14684 758 aaKnown RBP13.78□□□□□ -0.2
CAPN3-215ENST00000565559 MFSD10Q14728 455 aa13.78□□□□□ -0.2
CAPN3-215ENST00000565559 OLFML2BQ68BL8 750 aa13.78□□□□□ -0.2
CAPN3-215ENST00000565559 USP17L2Q6R6M4 530 aa13.78□□□□□ -0.2
CAPN3-215ENST00000565559 NPLOC4Q8TAT6 608 aa13.78□□□□□ -0.2
CAPN3-215ENST00000565559 GINM1Q9NU53 330 aa13.78□□□□□ -0.2
CAPN3-215ENST00000565559 PHF24Q9UPV7 400 aa13.78□□□□□ -0.2
CAPN3-215ENST00000565559 IL16Q14005 1332 aa13.78□□□□□ -0.2
CAPN3-215ENST00000565559 GPR37L1O60883 481 aa13.77□□□□□ -0.21
CAPN3-215ENST00000565559 RHBDL3P58872 404 aa13.77□□□□□ -0.21
CAPN3-215ENST00000565559 SKIV2LQ15477 1246 aaKnown RBP13.77□□□□□ -0.21
CAPN3-215ENST00000565559 CCDC27Q2M243 656 aa13.77□□□□□ -0.21
CAPN3-215ENST00000565559 FAM9BQ8IZU0 186 aa13.77□□□□□ -0.21
CAPN3-215ENST00000565559 MICALL1Q8N3F8 863 aa13.77□□□□□ -0.21
CAPN3-215ENST00000565559 SLC44A5Q8NCS7 719 aa13.77□□□□□ -0.21
CAPN3-215ENST00000565559 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.77□□□□□ -0.21
CAPN3-215ENST00000565559 SLC28A3Q9HAS3 691 aa13.77□□□□□ -0.21
CAPN3-215ENST00000565559 FANCIQ9NVI1 1328 aa13.77□□□□□ -0.21
CAPN3-215ENST00000565559 SLC5A4Q9NY91 659 aa13.77□□□□□ -0.21
CAPN3-215ENST00000565559 PI4KBQ9UBF8 816 aa13.77□□□□□ -0.21
CAPN3-215ENST00000565559 CACNA1FO60840 1977 aa13.76□□□□□ -0.21
CAPN3-215ENST00000565559 DCDC2CA8MYV0 355 aa13.76□□□□□ -0.21
CAPN3-215ENST00000565559 USP17L15C9J2P7 530 aa13.76□□□□□ -0.21
CAPN3-215ENST00000565559 USP17L13C9JLJ4 530 aa13.76□□□□□ -0.21
CAPN3-215ENST00000565559 USP17L11C9JVI0 530 aa13.76□□□□□ -0.21
CAPN3-215ENST00000565559 USP17L18D6R9N7 530 aa13.76□□□□□ -0.21
CAPN3-215ENST00000565559 USP17L22D6RA61 530 aa13.76□□□□□ -0.21
CAPN3-215ENST00000565559 USP17L17D6RBQ6 530 aa13.76□□□□□ -0.21
CAPN3-215ENST00000565559 USP17L19D6RCP7 530 aa13.76□□□□□ -0.21
CAPN3-215ENST00000565559 USP17L20D6RJB6 530 aa13.76□□□□□ -0.21
CAPN3-215ENST00000565559 PHKA1P46020 1223 aa13.76□□□□□ -0.21
CAPN3-215ENST00000565559 GSTO1P78417 241 aa13.76□□□□□ -0.21
CAPN3-215ENST00000565559 TFF2Q03403 129 aa13.76□□□□□ -0.21
CAPN3-215ENST00000565559 USP17L24Q0WX57 530 aa13.76□□□□□ -0.21
CAPN3-215ENST00000565559 PPIGQ13427 754 aaKnown RBP eCLIP13.76□□□□□ -0.21
CAPN3-215ENST00000565559 ERICH6Q7L0X2 663 aa13.76□□□□□ -0.21
CAPN3-215ENST00000565559 RNF180Q86T96 592 aa13.76□□□□□ -0.21
CAPN3-215ENST00000565559 WWC1Q8IX03 1113 aa13.76□□□□□ -0.21
CAPN3-215ENST00000565559 DHX36Q9H2U1 1008 aaKnown RBP13.76□□□□□ -0.21
CAPN3-215ENST00000565559 CEP126Q9P2H0 1117 aa13.76□□□□□ -0.21
CAPN3-215ENST00000565559 PDS5AQ29RF7 1337 aaKnown RBP13.75□□□□□ -0.21
CAPN3-215ENST00000565559 MYH2Q9UKX2 1941 aa13.75□□□□□ -0.21
CAPN3-215ENST00000565559 GRXCR1A8MXD5 290 aa13.75□□□□□ -0.21
CAPN3-215ENST00000565559 CNMDO75829 334 aa13.75□□□□□ -0.21
CAPN3-215ENST00000565559 TIMP1P01033 207 aa13.75□□□□□ -0.21
CAPN3-215ENST00000565559 LDHCP07864 332 aa13.75□□□□□ -0.21
CAPN3-215ENST00000565559 RARBP10826 455 aa13.75□□□□□ -0.21
CAPN3-215ENST00000565559 MRE11P49959 708 aa13.75□□□□□ -0.21
CAPN3-215ENST00000565559 KCNQ1P51787 676 aa13.75□□□□□ -0.21
CAPN3-215ENST00000565559 ARSIQ5FYB1 569 aa13.75□□□□□ -0.21
CAPN3-215ENST00000565559 FAM47AQ5JRC9 791 aa13.75□□□□□ -0.21
CAPN3-215ENST00000565559 PSRC1Q6PGN9 363 aaPredicted RBP13.75□□□□□ -0.21
CAPN3-215ENST00000565559 CRACR2BQ8N4Y2 399 aaPredicted RBP13.75□□□□□ -0.21
CAPN3-215ENST00000565559 HERVK_113Q902F9 699 aa13.75□□□□□ -0.21
CAPN3-215ENST00000565559 KHSRPQ92945 711 aaKnown RBP eCLIP13.75□□□□□ -0.21
CAPN3-215ENST00000565559 TOX2Q96NM4 488 aa13.75□□□□□ -0.21
CAPN3-215ENST00000565559 FEZ1Q99689 392 aa13.75□□□□□ -0.21
CAPN3-215ENST00000565559 XPNPEP3Q9NQH7 507 aa13.75□□□□□ -0.21
CAPN3-215ENST00000565559 EMILIN3Q9NT22 766 aa13.75□□□□□ -0.21
CAPN3-215ENST00000565559 ATAD5Q96QE3 1844 aa13.74□□□□□ -0.21
CAPN3-215ENST00000565559 ERC2O15083 957 aa13.74□□□□□ -0.21
CAPN3-215ENST00000565559 STRNO43815 780 aa13.74□□□□□ -0.21
CAPN3-215ENST00000565559 IGHA2P01877 340 aa13.74□□□□□ -0.21
CAPN3-215ENST00000565559 ADORA2AP29274 412 aa13.74□□□□□ -0.21
CAPN3-215ENST00000565559 MECOMQ03112 1051 aa13.74□□□□□ -0.21
CAPN3-215ENST00000565559 MFSD5Q6N075 450 aa13.74□□□□□ -0.21
CAPN3-215ENST00000565559 TEX11Q8IYF3 940 aa13.74□□□□□ -0.21
CAPN3-215ENST00000565559 NOL10Q9BSC4 688 aaKnown RBP13.74□□□□□ -0.21
CAPN3-215ENST00000565559 MTIF3Q9H2K0 278 aaKnown RBP13.74□□□□□ -0.21
CAPN3-215ENST00000565559 ZBTB21Q9ULJ3 1066 aa13.74□□□□□ -0.21
CAPN3-215ENST00000565559 A0A1W2PQ45 241 aaPredicted RBP13.73□□□□□ -0.21
CAPN3-215ENST00000565559 A0A1W2PQY0 241 aa13.73□□□□□ -0.21
CAPN3-215ENST00000565559 GDF11O95390 407 aa13.73□□□□□ -0.21
CAPN3-215ENST00000565559 USP14P54578 494 aa13.73□□□□□ -0.21
CAPN3-215ENST00000565559 EXOSC9Q06265 439 aaKnown RBP13.73□□□□□ -0.21
CAPN3-215ENST00000565559 FAAP100Q0VG06 881 aa13.73□□□□□ -0.21
CAPN3-215ENST00000565559 RASGRF1Q13972 1273 aa13.73□□□□□ -0.21
CAPN3-215ENST00000565559 CCDC102BQ68D86 513 aa13.73□□□□□ -0.21
CAPN3-215ENST00000565559 ANKRD33Q7Z3H0 272 aa13.73□□□□□ -0.21
CAPN3-215ENST00000565559 TMEM199Q8N511 208 aa13.73□□□□□ -0.21
CAPN3-215ENST00000565559 MARVELD3Q96A59 401 aa13.73□□□□□ -0.21
CAPN3-215ENST00000565559 FAM86C2PA6NEL3 165 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms