RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 HOXC10Q9NYD6 342 aa22.27■■□□□ 1.16
CLN6-204ENST00000564752 CCND3P30281 292 aaPredicted RBP22.26■■□□□ 1.15
CLN6-204ENST00000564752 C12orf60Q5U649 245 aa22.26■■□□□ 1.15
CLN6-204ENST00000564752 WDR78Q5VTH9 848 aa22.26■■□□□ 1.15
CLN6-204ENST00000564752 SIAH1Q8IUQ4 282 aa22.26■■□□□ 1.15
CLN6-204ENST00000564752 HOXC6P09630 235 aa22.25■■□□□ 1.15
CLN6-204ENST00000564752 AKR1B1P15121 316 aa22.25■■□□□ 1.15
CLN6-204ENST00000564752 KIAA1755Q5JYT7 1200 aa22.25■■□□□ 1.15
CLN6-204ENST00000564752 ZSCAN25Q6NSZ9 544 aa22.25■■□□□ 1.15
CLN6-204ENST00000564752 FLRT1Q9NZU1 646 aa22.25■■□□□ 1.15
CLN6-204ENST00000564752 PCDHB15Q9Y5E8 787 aa22.25■■□□□ 1.15
CLN6-204ENST00000564752 ALPK3Q96L96 1907 aa22.24■■□□□ 1.15
CLN6-204ENST00000564752 CYP2D7A0A087X1C5 515 aa22.24■■□□□ 1.15
CLN6-204ENST00000564752 USP17L12C9JPN9 530 aa22.24■■□□□ 1.15
CLN6-204ENST00000564752 USP17L21D6R901 530 aa22.24■■□□□ 1.15
CLN6-204ENST00000564752 SMIM22K7EJ46 135 aa22.24■■□□□ 1.15
CLN6-204ENST00000564752 CDK8P49336 464 aa22.24■■□□□ 1.15
CLN6-204ENST00000564752 GRB14Q14449 540 aa22.24■■□□□ 1.15
CLN6-204ENST00000564752 GPATCH3Q96I76 525 aa22.24■■□□□ 1.15
CLN6-204ENST00000564752 CCDC17Q96LX7 622 aa22.24■■□□□ 1.15
CLN6-204ENST00000564752 CRBNQ96SW2 442 aa22.24■■□□□ 1.15
CLN6-204ENST00000564752 STAP2Q9UGK3 403 aa22.24■■□□□ 1.15
CLN6-204ENST00000564752 IVNS1ABPQ9Y6Y0 642 aa22.24■■□□□ 1.15
CLN6-204ENST00000564752 A0A1W2PPC1 479 aa22.23■■□□□ 1.15
CLN6-204ENST00000564752 MFSD14CQ5VZR4 134 aa22.23■■□□□ 1.15
CLN6-204ENST00000564752 C7orf61Q8IZ16 206 aa22.23■■□□□ 1.15
CLN6-204ENST00000564752 LPAR1Q92633 364 aa22.23■■□□□ 1.15
CLN6-204ENST00000564752 TANGO6Q9C0B7 1094 aa22.23■■□□□ 1.15
CLN6-204ENST00000564752 PUS7LQ9H0K6 701 aaKnown RBP22.23■■□□□ 1.15
CLN6-204ENST00000564752 ARHGEF10LQ9HCE6 1279 aa22.23■■□□□ 1.15
CLN6-204ENST00000564752 ECHDC1Q9NTX5 307 aa22.23■■□□□ 1.15
CLN6-204ENST00000564752 TMX2Q9Y320 296 aa22.23■■□□□ 1.15
CLN6-204ENST00000564752 SLC4A4Q9Y6R1 1079 aa22.23■■□□□ 1.15
CLN6-204ENST00000564752 DSG3P32926 999 aa22.22■■□□□ 1.15
CLN6-204ENST00000564752 ATP2B2Q01814 1243 aa22.22■■□□□ 1.15
CLN6-204ENST00000564752 ICA1Q05084 483 aa22.22■■□□□ 1.15
CLN6-204ENST00000564752 CTR9Q6PD62 1173 aa22.22■■□□□ 1.15
CLN6-204ENST00000564752 C16orf86Q6ZW13 317 aa22.22■■□□□ 1.15
CLN6-204ENST00000564752 CLEC10AQ8IUN9 316 aa22.22■■□□□ 1.15
CLN6-204ENST00000564752 AMOTL1Q8IY63 956 aa22.22■■□□□ 1.15
CLN6-204ENST00000564752 NPLOC4Q8TAT6 608 aa22.22■■□□□ 1.15
CLN6-204ENST00000564752 DDRGK1Q96HY6 314 aa22.22■■□□□ 1.15
CLN6-204ENST00000564752 MOV10L1Q9BXT6 1211 aaKnown RBP22.22■■□□□ 1.15
CLN6-204ENST00000564752 PFASO15067 1338 aa22.22■■□□□ 1.15
CLN6-204ENST00000564752 STRNO43815 780 aa22.21■■□□□ 1.15
CLN6-204ENST00000564752 IGHA2P01877 340 aa22.21■■□□□ 1.15
CLN6-204ENST00000564752 COL6A1P12109 1028 aa22.21■■□□□ 1.15
CLN6-204ENST00000564752 MB21D1Q8N884 522 aa22.21■■□□□ 1.15
CLN6-204ENST00000564752 SPATC1LQ9H0A9 340 aa22.21■■□□□ 1.15
CLN6-204ENST00000564752 SH2D4AQ9H788 454 aa22.21■■□□□ 1.15
CLN6-204ENST00000564752 VCPKMTQ9H867 229 aa22.21■■□□□ 1.15
CLN6-204ENST00000564752 LAMA3Q16787 3333 aa22.21■■□□□ 1.15
CLN6-204ENST00000564752 SPICE1Q8N0Z3 855 aa22.2■■□□□ 1.14
CLN6-204ENST00000564752 SHCBP1Q8NEM2 672 aa22.2■■□□□ 1.14
CLN6-204ENST00000564752 GDF15Q99988 308 aa22.2■■□□□ 1.14
CLN6-204ENST00000564752 ZMYND8Q9ULU4 1186 aaPredicted RBP22.2■■□□□ 1.14
CLN6-204ENST00000564752 FLOT1O75955 427 aa22.19■■□□□ 1.14
CLN6-204ENST00000564752 ERCC3P19447 782 aa22.19■■□□□ 1.14
CLN6-204ENST00000564752 STRBPQ96SI9 672 aaKnown RBP22.19■■□□□ 1.14
CLN6-204ENST00000564752 KANSL2Q9H9L4 492 aa22.19■■□□□ 1.14
CLN6-204ENST00000564752 EEF2P13639 858 aaKnown RBP22.18■■□□□ 1.14
CLN6-204ENST00000564752 ADORA2AP29274 412 aa22.18■■□□□ 1.14
CLN6-204ENST00000564752 CYP2C19P33261 490 aa22.18■■□□□ 1.14
CLN6-204ENST00000564752 BMP8BP34820 402 aa22.18■■□□□ 1.14
CLN6-204ENST00000564752 DPP9Q86TI2 863 aa22.18■■□□□ 1.14
CLN6-204ENST00000564752 WDR46O15213 610 aaKnown RBP22.17■■□□□ 1.14
CLN6-204ENST00000564752 TSHZ3Q63HK5 1081 aa22.17■■□□□ 1.14
CLN6-204ENST00000564752 OLFML2BQ68BL8 750 aa22.17■■□□□ 1.14
CLN6-204ENST00000564752 KBTBD3Q8NAB2 608 aa22.17■■□□□ 1.14
CLN6-204ENST00000564752 TRPV1Q8NER1 839 aa22.17■■□□□ 1.14
CLN6-204ENST00000564752 ATG4CQ96DT6 458 aa22.17■■□□□ 1.14
CLN6-204ENST00000564752 MROH8Q9H579 483 aa22.17■■□□□ 1.14
CLN6-204ENST00000564752 ARPP21Q9UBL0 812 aaPredicted RBP22.17■■□□□ 1.14
CLN6-204ENST00000564752 DDX20Q9UHI6 824 aaKnown RBP22.17■■□□□ 1.14
CLN6-204ENST00000564752 GSG1L2A8MUP6 293 aa22.16■■□□□ 1.14
CLN6-204ENST00000564752 MSCO60682 206 aa22.16■■□□□ 1.14
CLN6-204ENST00000564752 SYN1P17600 705 aa22.16■■□□□ 1.14
CLN6-204ENST00000564752 PLS1Q14651 629 aa22.16■■□□□ 1.14
CLN6-204ENST00000564752 SBK1Q52WX2 424 aa22.16■■□□□ 1.14
CLN6-204ENST00000564752 OSBP2Q969R2 916 aa22.16■■□□□ 1.14
CLN6-204ENST00000564752 ADAMTS5Q9UNA0 930 aa22.16■■□□□ 1.14
CLN6-204ENST00000564752 BAZ2AQ9UIF9 1905 aaKnown RBP22.16■■□□□ 1.14
CLN6-204ENST00000564752 COBLO75128 1261 aa22.15■■□□□ 1.14
CLN6-204ENST00000564752 CNGA1P29973 690 aa22.15■■□□□ 1.14
CLN6-204ENST00000564752 LRRC26Q2I0M4 334 aa22.15■■□□□ 1.14
CLN6-204ENST00000564752 GIMAP6Q6P9H5 292 aa22.15■■□□□ 1.14
CLN6-204ENST00000564752 ABRAQ8N0Z2 381 aa22.15■■□□□ 1.14
CLN6-204ENST00000564752 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.15■■□□□ 1.14
CLN6-204ENST00000564752 ZBTB47Q9UFB7 747 aaPredicted RBP22.15■■□□□ 1.14
CLN6-204ENST00000564752 MYH8P13535 1937 aa22.15■■□□□ 1.14
CLN6-204ENST00000564752 SOX1O00570 391 aaPredicted RBP22.14■■□□□ 1.13
CLN6-204ENST00000564752 RNF113AO15541 343 aaKnown RBP22.14■■□□□ 1.13
CLN6-204ENST00000564752 CYBAP13498 195 aa22.14■■□□□ 1.13
CLN6-204ENST00000564752 TMEM132BQ14DG7 1078 aa22.14■■□□□ 1.13
CLN6-204ENST00000564752 NCAPG2Q86XI2 1143 aa22.14■■□□□ 1.13
CLN6-204ENST00000564752 SLC5A4Q9NY91 659 aa22.14■■□□□ 1.13
CLN6-204ENST00000564752 RLFQ13129 1914 aa22.14■■□□□ 1.13
CLN6-204ENST00000564752 TTC41PQ6P2S7 1318 aa22.13■■□□□ 1.13
CLN6-204ENST00000564752 MAGEA10P43363 369 aaPredicted RBP22.13■■□□□ 1.13
CLN6-204ENST00000564752 SAMD1Q6SPF0 538 aaPredicted RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms