RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 HAND2P61296 217 aa20.51■□□□□ 0.87
USB1-209ENST00000564387 HERVK_113P62684 666 aa20.51■□□□□ 0.87
USB1-209ENST00000564387 PTH1RQ03431 593 aa20.51■□□□□ 0.87
USB1-209ENST00000564387 FAM110CQ1W6H9 321 aa20.51■□□□□ 0.87
USB1-209ENST00000564387 FAM47AQ5JRC9 791 aa20.51■□□□□ 0.87
USB1-209ENST00000564387 TNS4Q8IZW8 715 aa20.51■□□□□ 0.87
USB1-209ENST00000564387 CD99L2Q8TCZ2 262 aa20.51■□□□□ 0.87
USB1-209ENST00000564387 SMCR8Q8TEV9 937 aaPredicted RBP20.51■□□□□ 0.87
USB1-209ENST00000564387 MAP4K1Q92918 833 aa20.51■□□□□ 0.87
USB1-209ENST00000564387 ESYT1Q9BSJ8 1104 aa20.51■□□□□ 0.87
USB1-209ENST00000564387 RNF41Q9H4P4 317 aaPredicted RBP20.51■□□□□ 0.87
USB1-209ENST00000564387 TCP11L1Q9NUJ3 509 aa20.51■□□□□ 0.87
USB1-209ENST00000564387 MORF4L1Q9UBU8 362 aa20.51■□□□□ 0.87
USB1-209ENST00000564387 RLFQ13129 1914 aa20.51■□□□□ 0.87
USB1-209ENST00000564387 HTTP42858 3142 aa20.5■□□□□ 0.87
USB1-209ENST00000564387 TTLL1O95922 423 aa20.5■□□□□ 0.87
USB1-209ENST00000564387 GNRH1P01148 92 aa20.5■□□□□ 0.87
USB1-209ENST00000564387 CTGFP29279 349 aa20.5■□□□□ 0.87
USB1-209ENST00000564387 IRX3P78415 501 aaPredicted RBP20.5■□□□□ 0.87
USB1-209ENST00000564387 MFSD6Q6ZSS7 791 aa20.5■□□□□ 0.87
USB1-209ENST00000564387 OTOP1Q7RTM1 612 aa20.5■□□□□ 0.87
USB1-209ENST00000564387 GTF3C2Q8WUA4 911 aaPredicted RBP20.5■□□□□ 0.87
USB1-209ENST00000564387 MCOLN1Q9GZU1 580 aa20.5■□□□□ 0.87
USB1-209ENST00000564387 RPAP3Q9H6T3 665 aaPredicted RBP20.5■□□□□ 0.87
USB1-209ENST00000564387 WDR46O15213 610 aaKnown RBP20.49■□□□□ 0.87
USB1-209ENST00000564387 IMMTQ16891 758 aaKnown RBP20.49■□□□□ 0.87
USB1-209ENST00000564387 PPP4R3BQ5MIZ7 849 aa20.49■□□□□ 0.87
USB1-209ENST00000564387 GOPCQ9HD26 462 aa20.49■□□□□ 0.87
USB1-209ENST00000564387 RBPJLQ9UBG7 517 aa20.49■□□□□ 0.87
USB1-209ENST00000564387 CLIP2Q9UDT6 1046 aa20.49■□□□□ 0.87
USB1-209ENST00000564387 TSPY2A6NKD2 308 aa20.48■□□□□ 0.87
USB1-209ENST00000564387 RANBP6O60518 1105 aaKnown RBP20.48■□□□□ 0.87
USB1-209ENST00000564387 ARHGEF6Q15052 776 aa20.48■□□□□ 0.87
USB1-209ENST00000564387 ANKRD13CQ8N6S4 541 aa20.48■□□□□ 0.87
USB1-209ENST00000564387 GMCL1P1Q8NEA9 526 aa20.48■□□□□ 0.87
USB1-209ENST00000564387 NKX2-3Q8TAU0 364 aa20.48■□□□□ 0.87
USB1-209ENST00000564387 ARHGAP39Q9C0H5 1083 aa20.48■□□□□ 0.87
USB1-209ENST00000564387 EFCC1Q9HA90 598 aa20.48■□□□□ 0.87
USB1-209ENST00000564387 U3KPZ7 1027 aaPredicted RBP20.48■□□□□ 0.87
USB1-209ENST00000564387 MYPNQ86TC9 1320 aa20.48■□□□□ 0.87
USB1-209ENST00000564387 MYH4Q9Y623 1939 aa20.47■□□□□ 0.87
USB1-209ENST00000564387 F5H6K3 240 aa20.47■□□□□ 0.87
USB1-209ENST00000564387 KLRC3Q07444 240 aa20.47■□□□□ 0.87
USB1-209ENST00000564387 COG2Q14746 738 aa20.47■□□□□ 0.87
USB1-209ENST00000564387 KIF22Q14807 665 aa20.47■□□□□ 0.87
USB1-209ENST00000564387 FBXO46Q6PJ61 603 aaPredicted RBP20.47■□□□□ 0.87
USB1-209ENST00000564387 LSG1Q9H089 658 aaKnown RBP20.47■□□□□ 0.87
USB1-209ENST00000564387 TXNRD2Q9NNW7 524 aa20.47■□□□□ 0.87
USB1-209ENST00000564387 TRIM17Q9Y577 477 aa20.47■□□□□ 0.87
USB1-209ENST00000564387 NEDD4P46934 1319 aa20.47■□□□□ 0.87
USB1-209ENST00000564387 ZSWIM8A7E2V4 1837 aa20.46■□□□□ 0.87
USB1-209ENST00000564387 PARP14Q460N5 1801 aa20.46■□□□□ 0.87
USB1-209ENST00000564387 SPDYE16A6NNV3 312 aaPredicted RBP20.46■□□□□ 0.87
USB1-209ENST00000564387 CDC45O75419 566 aa20.46■□□□□ 0.87
USB1-209ENST00000564387 CYP21A2P08686 494 aa20.46■□□□□ 0.87
USB1-209ENST00000564387 ATP2B2Q01814 1243 aa20.46■□□□□ 0.87
USB1-209ENST00000564387 SPICE1Q8N0Z3 855 aa20.46■□□□□ 0.87
USB1-209ENST00000564387 TRIM47Q96LD4 638 aa20.46■□□□□ 0.87
USB1-209ENST00000564387 HOXC10Q9NYD6 342 aa20.46■□□□□ 0.87
USB1-209ENST00000564387 ADAMTS5Q9UNA0 930 aa20.46■□□□□ 0.87
USB1-209ENST00000564387 RABGAP1Q9Y3P9 1069 aa20.46■□□□□ 0.87
USB1-209ENST00000564387 NMT2O60551 498 aa20.45■□□□□ 0.86
USB1-209ENST00000564387 CNMDO75829 334 aa20.45■□□□□ 0.86
USB1-209ENST00000564387 NDUFB10O96000 172 aa20.45■□□□□ 0.86
USB1-209ENST00000564387 PSMC4P43686 418 aa20.45■□□□□ 0.86
USB1-209ENST00000564387 ESR2Q92731 530 aa20.45■□□□□ 0.86
USB1-209ENST00000564387 TTC14Q96N46 770 aa20.45■□□□□ 0.86
USB1-209ENST00000564387 PTPN22Q9Y2R2 807 aa20.45■□□□□ 0.86
USB1-209ENST00000564387 MGAMO43451 1857 aa20.45■□□□□ 0.86
USB1-209ENST00000564387 A0A0G2JMZ2 1700 aa20.44■□□□□ 0.86
USB1-209ENST00000564387 DSG3P32926 999 aa20.44■□□□□ 0.86
USB1-209ENST00000564387 PRMT2P55345 433 aa20.44■□□□□ 0.86
USB1-209ENST00000564387 RRP12Q5JTH9 1297 aaKnown RBP20.44■□□□□ 0.86
USB1-209ENST00000564387 RCSD1Q6JBY9 416 aa20.44■□□□□ 0.86
USB1-209ENST00000564387 GPRC5AQ8NFJ5 357 aa20.44■□□□□ 0.86
USB1-209ENST00000564387 CNNM2Q9H8M5 875 aa20.44■□□□□ 0.86
USB1-209ENST00000564387 FCGRTP55899 365 aa20.43■□□□□ 0.86
USB1-209ENST00000564387 ERVK-9P63128 1117 aa20.43■□□□□ 0.86
USB1-209ENST00000564387 ERVK-24P63145 666 aa20.43■□□□□ 0.86
USB1-209ENST00000564387 Q3C1V9 767 aa20.43■□□□□ 0.86
USB1-209ENST00000564387 KIAA1211Q6ZU35 1233 aa20.43■□□□□ 0.86
USB1-209ENST00000564387 ANKS1AQ92625 1134 aa20.43■□□□□ 0.86
USB1-209ENST00000564387 GMCL1Q96IK5 515 aa20.43■□□□□ 0.86
USB1-209ENST00000564387 KRT23Q9C075 422 aa20.43■□□□□ 0.86
USB1-209ENST00000564387 TANGO6Q9C0B7 1094 aa20.43■□□□□ 0.86
USB1-209ENST00000564387 TOMM22Q9NS69 142 aa20.43■□□□□ 0.86
USB1-209ENST00000564387 RBM8AQ9Y5S9 174 aaKnown RBP20.43■□□□□ 0.86
USB1-209ENST00000564387 NECTIN1Q15223 517 aa20.42■□□□□ 0.86
USB1-209ENST00000564387 FAM83BQ5T0W9 1011 aa20.42■□□□□ 0.86
USB1-209ENST00000564387 LRRC47Q8N1G4 583 aaKnown RBP20.42■□□□□ 0.86
USB1-209ENST00000564387 MB21D1Q8N884 522 aa20.42■□□□□ 0.86
USB1-209ENST00000564387 ABHD8Q96I13 439 aa20.42■□□□□ 0.86
USB1-209ENST00000564387 BTBD7Q9P203 1132 aa20.42■□□□□ 0.86
USB1-209ENST00000564387 ZSWIM5Q9P217 1185 aa20.42■□□□□ 0.86
USB1-209ENST00000564387 SRRDQ9UH36 339 aa20.42■□□□□ 0.86
USB1-209ENST00000564387 STX8Q9UNK0 236 aa20.42■□□□□ 0.86
USB1-209ENST00000564387 B4E1Z4 1266 aa20.41■□□□□ 0.86
USB1-209ENST00000564387 PEX10O60683 326 aa20.41■□□□□ 0.86
USB1-209ENST00000564387 KDM4AO75164 1064 aa20.41■□□□□ 0.86
USB1-209ENST00000564387 FLOT1O75955 427 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms