RNA–Protein interactions for RNA: ENST00000564354.1

AP000842.3-201, humanhuman

TSL 3 BASIC

Gene AP000842.3, Length 808 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000842.3-201ENST00000564354 ERBINQ96RT1 1412 aa9.22□□□□□ -0.93
AP000842.3-201ENST00000564354 PRDM15P57071 1507 aaPredicted RBP9.21□□□□□ -0.93
AP000842.3-201ENST00000564354 MAP3K1Q13233 1512 aa9.21□□□□□ -0.93
AP000842.3-201ENST00000564354 TTLL4Q14679 1199 aa9.21□□□□□ -0.94
AP000842.3-201ENST00000564354 ARHGAP27Q6ZUM4 889 aa9.21□□□□□ -0.94
AP000842.3-201ENST00000564354 SULF2Q8IWU5 870 aa9.21□□□□□ -0.94
AP000842.3-201ENST00000564354 TOX2Q96NM4 488 aa9.21□□□□□ -0.94
AP000842.3-201ENST00000564354 SSU72Q9NP77 194 aaKnown RBP9.21□□□□□ -0.94
AP000842.3-201ENST00000564354 KRT82Q9NSB4 513 aa9.21□□□□□ -0.94
AP000842.3-201ENST00000564354 NKTRP30414 1462 aaKnown RBP9.21□□□□□ -0.94
AP000842.3-201ENST00000564354 HCLS1P14317 486 aaPredicted RBP9.2□□□□□ -0.94
AP000842.3-201ENST00000564354 ATF3P18847 181 aa9.2□□□□□ -0.94
AP000842.3-201ENST00000564354 CFPP27918 469 aa9.2□□□□□ -0.94
AP000842.3-201ENST00000564354 MAPK8P45983 427 aa9.2□□□□□ -0.94
AP000842.3-201ENST00000564354 ENOX2Q16206 610 aaKnown RBP9.2□□□□□ -0.94
AP000842.3-201ENST00000564354 MAP1SQ66K74 1059 aaPredicted RBP9.2□□□□□ -0.94
AP000842.3-201ENST00000564354 C1QL4Q86Z23 238 aa9.2□□□□□ -0.94
AP000842.3-201ENST00000564354 CBX8Q9HC52 389 aa9.2□□□□□ -0.94
AP000842.3-201ENST00000564354 SLC52A1Q9NWF4 448 aa9.2□□□□□ -0.94
AP000842.3-201ENST00000564354 PCOLCE2Q9UKZ9 415 aa9.2□□□□□ -0.94
AP000842.3-201ENST00000564354 SPATA31A6Q5VVP1 1343 aa9.2□□□□□ -0.94
AP000842.3-201ENST00000564354 VPS8Q8N3P4 1428 aa9.2□□□□□ -0.94
AP000842.3-201ENST00000564354 TET3O43151 1660 aa9.2□□□□□ -0.94
AP000842.3-201ENST00000564354 KDM5AP29375 1690 aaKnown RBP9.2□□□□□ -0.94
AP000842.3-201ENST00000564354 TREHO43280 583 aa9.19□□□□□ -0.94
AP000842.3-201ENST00000564354 TSPAN15O95858 294 aa9.19□□□□□ -0.94
AP000842.3-201ENST00000564354 ZNF865P0CJ78 1059 aaPredicted RBP9.19□□□□□ -0.94
AP000842.3-201ENST00000564354 ARNTP27540 789 aa9.19□□□□□ -0.94
AP000842.3-201ENST00000564354 RAP1GAPP47736 663 aa9.19□□□□□ -0.94
AP000842.3-201ENST00000564354 DSC3Q14574 896 aa9.19□□□□□ -0.94
AP000842.3-201ENST00000564354 MLANAQ16655 118 aa9.19□□□□□ -0.94
AP000842.3-201ENST00000564354 ANKRD30AQ9BXX3 1397 aa9.19□□□□□ -0.94
AP000842.3-201ENST00000564354 ABCC5O15440 1437 aa9.19□□□□□ -0.94
AP000842.3-201ENST00000564354 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.18□□□□□ -0.94
AP000842.3-201ENST00000564354 CROCC2H7BZ55 1655 aa9.18□□□□□ -0.94
AP000842.3-201ENST00000564354 KCNMB1Q16558 191 aa9.18□□□□□ -0.94
AP000842.3-201ENST00000564354 LCE5AQ5TCM9 118 aa9.18□□□□□ -0.94
AP000842.3-201ENST00000564354 ZSCAN29Q8IWY8 852 aaPredicted RBP9.18□□□□□ -0.94
AP000842.3-201ENST00000564354 STK35Q8TDR2 534 aa9.18□□□□□ -0.94
AP000842.3-201ENST00000564354 ACSBG1Q96GR2 724 aa9.18□□□□□ -0.94
AP000842.3-201ENST00000564354 PRDM7Q9NQW5 492 aa9.18□□□□□ -0.94
AP000842.3-201ENST00000564354 PTPN23Q9H3S7 1636 aa9.17□□□□□ -0.94
AP000842.3-201ENST00000564354 NWD1Q149M9 1564 aa9.17□□□□□ -0.94
AP000842.3-201ENST00000564354 ADGRB3O60242 1522 aa9.17□□□□□ -0.94
AP000842.3-201ENST00000564354 PPP1R16BQ96T49 567 aa9.17□□□□□ -0.94
AP000842.3-201ENST00000564354 EMILIN2Q9BXX0 1053 aa9.17□□□□□ -0.94
AP000842.3-201ENST00000564354 CHD2O14647 1828 aaKnown RBP9.17□□□□□ -0.94
AP000842.3-201ENST00000564354 DAPK1P53355 1430 aa9.16□□□□□ -0.94
AP000842.3-201ENST00000564354 PLEKHG1Q9ULL1 1385 aa9.16□□□□□ -0.94
AP000842.3-201ENST00000564354 LOC105371045A0A1W2PR82 267 aa9.16□□□□□ -0.94
AP000842.3-201ENST00000564354 NEFMP07197 916 aa9.16□□□□□ -0.94
AP000842.3-201ENST00000564354 ITIH2P19823 946 aa9.16□□□□□ -0.94
AP000842.3-201ENST00000564354 NME2P22392 152 aa9.16□□□□□ -0.94
AP000842.3-201ENST00000564354 TPTE2Q6XPS3 522 aa9.16□□□□□ -0.94
AP000842.3-201ENST00000564354 LCNL1Q6ZST4 164 aa9.16□□□□□ -0.94
AP000842.3-201ENST00000564354 PDZD3Q86UT5 571 aa9.16□□□□□ -0.94
AP000842.3-201ENST00000564354 TOP6BLQ8N6T0 577 aa9.16□□□□□ -0.94
AP000842.3-201ENST00000564354 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.16□□□□□ -0.94
AP000842.3-201ENST00000564354 ASB11Q8WXH4 323 aa9.16□□□□□ -0.94
AP000842.3-201ENST00000564354 HEXIM2Q96MH2 286 aaKnown RBP9.16□□□□□ -0.94
AP000842.3-201ENST00000564354 C19orf44Q9H6X5 657 aa9.16□□□□□ -0.94
AP000842.3-201ENST00000564354 CTNND2Q9UQB3 1225 aa9.16□□□□□ -0.94
AP000842.3-201ENST00000564354 TBX22Q9Y458 520 aa9.16□□□□□ -0.94
AP000842.3-201ENST00000564354 IVNS1ABPQ9Y6Y0 642 aa9.16□□□□□ -0.94
AP000842.3-201ENST00000564354 COL16A1Q07092 1604 aaPredicted RBP9.16□□□□□ -0.94
AP000842.3-201ENST00000564354 NOS1P29475 1434 aa9.15□□□□□ -0.94
AP000842.3-201ENST00000564354 FGD6Q6ZV73 1430 aa9.15□□□□□ -0.94
AP000842.3-201ENST00000564354 RIMS2Q9UQ26 1411 aa9.15□□□□□ -0.94
AP000842.3-201ENST00000564354 MYO5BQ9ULV0 1848 aa9.15□□□□□ -0.94
AP000842.3-201ENST00000564354 GSTT1P30711 240 aa9.15□□□□□ -0.94
AP000842.3-201ENST00000564354 FAM214BQ7L5A3 538 aa9.15□□□□□ -0.94
AP000842.3-201ENST00000564354 SIAH1Q8IUQ4 282 aa9.15□□□□□ -0.94
AP000842.3-201ENST00000564354 ZSCAN18Q8TBC5 510 aaPredicted RBP9.15□□□□□ -0.94
AP000842.3-201ENST00000564354 LRP6O75581 1613 aa9.15□□□□□ -0.94
AP000842.3-201ENST00000564354 LMTK2Q8IWU2 1503 aa9.15□□□□□ -0.95
AP000842.3-201ENST00000564354 AFF2P51816 1311 aa9.14□□□□□ -0.95
AP000842.3-201ENST00000564354 FAM50AQ14320 339 aaKnown RBP9.14□□□□□ -0.95
AP000842.3-201ENST00000564354 LILRA6Q6PI73 481 aa9.14□□□□□ -0.95
AP000842.3-201ENST00000564354 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.14□□□□□ -0.95
AP000842.3-201ENST00000564354 HOMEZQ8IX15 550 aa9.14□□□□□ -0.95
AP000842.3-201ENST00000564354 LRRC56Q8IYG6 542 aaPredicted RBP9.14□□□□□ -0.95
AP000842.3-201ENST00000564354 GPBAR1Q8TDU6 330 aa9.14□□□□□ -0.95
AP000842.3-201ENST00000564354 ISL2Q96A47 359 aa9.14□□□□□ -0.95
AP000842.3-201ENST00000564354 LIN37Q96GY3 246 aaPredicted RBP9.14□□□□□ -0.95
AP000842.3-201ENST00000564354 SETDB2Q96T68 719 aa9.14□□□□□ -0.95
AP000842.3-201ENST00000564354 PICK1Q9NRD5 415 aa9.14□□□□□ -0.95
AP000842.3-201ENST00000564354 NCOA3Q9Y6Q9 1424 aa9.14□□□□□ -0.95
AP000842.3-201ENST00000564354 GCC2Q8IWJ2 1684 aa9.13□□□□□ -0.95
AP000842.3-201ENST00000564354 ZP2Q05996 745 aa9.13□□□□□ -0.95
AP000842.3-201ENST00000564354 SAMM50Q9Y512 469 aa9.13□□□□□ -0.95
AP000842.3-201ENST00000564354 CSADQ9Y600 493 aa9.13□□□□□ -0.95
AP000842.3-201ENST00000564354 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.13□□□□□ -0.95
AP000842.3-201ENST00000564354 IGF2BP3O00425 579 aaKnown RBP eCLIP9.12□□□□□ -0.95
AP000842.3-201ENST00000564354 FBXO24O75426 580 aa9.12□□□□□ -0.95
AP000842.3-201ENST00000564354 IKZF1Q13422 519 aa9.12□□□□□ -0.95
AP000842.3-201ENST00000564354 ZC3H12AQ5D1E8 599 aaKnown RBP9.12□□□□□ -0.95
AP000842.3-201ENST00000564354 MPRIPQ6WCQ1 1025 aa9.12□□□□□ -0.95
AP000842.3-201ENST00000564354 BRINP3Q76B58 766 aa9.12□□□□□ -0.95
AP000842.3-201ENST00000564354 SPACA3Q8IXA5 215 aa9.12□□□□□ -0.95
AP000842.3-201ENST00000564354 C3orf58Q8NDZ4 430 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms