RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	CALCOCO2	Q13137	446 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	RIC3	Q7Z5B4	369 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	FNBP4	Q8N3X1	1017 aa	Predicted RBP	4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	SPINK5	Q9NQ38	1064 aa	Predicted RBP	4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	CUL4B	Q13620	913 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	ARHGAP22	Q7Z5H3	698 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	KIRREL3	Q8IZU9	778 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	IWS1	Q96ST2	819 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	PPCS	Q9HAB8	311 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	C1orf141	Q5JVX7	400 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	HDGFL1	Q5TGJ6	251 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	E4F1	Q66K89	784 aa	Predicted RBP	4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	MAP3K15	Q6ZN16	1313 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	LIN7A	O14910	233 aa	Predicted RBP	4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	EPHB4	P54760	987 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	KARS	Q15046	597 aa	Known RBP	4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	IQCB1	Q15051	598 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	CCDC113	Q9H0I3	377 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	TMEM60	Q9H2L4	133 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	PPP6R2	O75170	966 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	LSP1	P33241	339 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	BRF1	Q92994	677 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	SEPT3	Q9UH03	358 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	NEO1	Q92859	1461 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	ADK	P55263	362 aa	Known RBP	4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	TEF	Q10587	303 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	TESK2	Q96S53	571 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	ZRANB1	Q9UGI0	708 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	PPP1R9A	Q9ULJ8	1098 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	MAP3K5	Q99683	1374 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	TPP2	P29144	1249 aa	Predicted RBP	4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	AARS	P49588	968 aa	Known RBP eCLIP	4.7	□□□□□ -1.66	1e-6	■■■□□ 18.4
MACF1-231	ENST00000564288	DHX9	Q08211	1270 aa	Known RBP	4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	DENND2C	Q68D51	928 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	AGGF1	Q8N302	714 aa	eCLIP	4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	DGCR14	Q96DF8	476 aa	Known RBP	4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	SPZ1	Q9BXG8	430 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	NLRP14	Q86W24	1093 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	FGD4	Q96M96	766 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	PLEKHO1	Q53GL0	409 aa	Predicted RBP	4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	C19orf44	Q9H6X5	657 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	ABCC12	Q96J65	1359 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	DYTN	A2CJ06	578 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	GNAQ	P50148	359 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	SAFB2	Q14151	953 aa	Known RBP eCLIP	4.7	□□□□□ -1.66	6e-7	■■□□□ 14.3
MACF1-231	ENST00000564288	NAA30	Q147X3	362 aa	Predicted RBP	4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	PPP1R42	Q7Z4L9	355 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	MAGEA8	P43361	318 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	TMEM259	Q4ZIN3	620 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	RBM8A	Q9Y5S9	174 aa	Known RBP	4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	PFKFB2	O60825	505 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	MGEA5	O60502	916 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	GPT	P24298	496 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	NCOA7	Q8NI08	942 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	KCNG1	Q9UIX4	513 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	TMCC1	O94876	653 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	CEP85	Q6P2H3	762 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	FERMT2	Q96AC1	680 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	TBC1D8	O95759	1140 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	HOMER2	Q9NSB8	354 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	IKBKG	Q9Y6K9	419 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	ALG1	Q9BT22	464 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	TANGO6	Q9C0B7	1094 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	R3HDM2	Q9Y2K5	976 aa	Known RBP	4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	UNC13A	Q9UPW8	1703 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	PTPRT	O14522	1441 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	CPSF1	Q10570	1443 aa	Known RBP	4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	ARHGEF18	Q6ZSZ5	1173 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	BBOF1	Q8ND07	529 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	CHMP6	Q96FZ7	201 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	EDC4	Q6P2E9	1401 aa	Known RBP	4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	KCNB1	Q14721	858 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	CFAP157	Q5JU67	520 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	RSRC2	Q7L4I2	434 aa	Known RBP	4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	ENAH	Q8N8S7	591 aa	Predicted RBP	4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	PODXL	O00592	558 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	CALML3	P27482	149 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	IL1RAPL2	Q9NP60	686 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	PCDHA7	Q9UN72	937 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	MAGEA13P	A6NCF6	341 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	GNAT2	P19087	354 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	ZNF513	Q8N8E2	541 aa	Predicted RBP	4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	ANGPTL2	Q9UKU9	493 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288		A0A0G2JS52	829 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	SSB	P05455	408 aa	Known RBP eCLIP	4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	TRIM42	Q8IWZ5	723 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	ARL2BP	Q9Y2Y0	163 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	CCDC61	Q9Y6R9	512 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	PPP1R37	O75864	691 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	LMNB1	P20700	586 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	OPTN	Q96CV9	577 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	MMRN2	Q9H8L6	949 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	PRPF38A	Q8NAV1	312 aa	Known RBP	4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	NFE2L3	Q9Y4A8	694 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	IDE	P14735	1019 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	INA	Q16352	499 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	DDI1	Q8WTU0	396 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	MAP4K1	Q92918	833 aa		4.69	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms