RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 CCND3P30281 292 aaPredicted RBP28.78■■■□□ 2.2
NME3-206ENST00000564252 KIAA1755Q5JYT7 1200 aa28.78■■■□□ 2.2
NME3-206ENST00000564252 C12orf60Q5U649 245 aa28.78■■■□□ 2.2
NME3-206ENST00000564252 WDR78Q5VTH9 848 aa28.78■■■□□ 2.2
NME3-206ENST00000564252 A0A0G2JMZ2 1700 aa28.77■■■□□ 2.2
NME3-206ENST00000564252 AKR1B1P15121 316 aa28.77■■■□□ 2.2
NME3-206ENST00000564252 GRB14Q14449 540 aa28.77■■■□□ 2.2
NME3-206ENST00000564252 CLEC10AQ8IUN9 316 aa28.77■■■□□ 2.2
NME3-206ENST00000564252 SIAH1Q8IUQ4 282 aa28.77■■■□□ 2.2
NME3-206ENST00000564252 C11orf49Q9H6J7 331 aa28.77■■■□□ 2.2
NME3-206ENST00000564252 COG2Q14746 738 aa28.76■■■□□ 2.19
NME3-206ENST00000564252 LHX8Q68G74 356 aa28.76■■■□□ 2.19
NME3-206ENST00000564252 TANGO6Q9C0B7 1094 aa28.76■■■□□ 2.19
NME3-206ENST00000564252 HOXC10Q9NYD6 342 aa28.76■■■□□ 2.19
NME3-206ENST00000564252 FLRT1Q9NZU1 646 aa28.76■■■□□ 2.19
NME3-206ENST00000564252 LAMA3Q16787 3333 aa28.76■■■□□ 2.19
NME3-206ENST00000564252 USP17L12C9JPN9 530 aa28.75■■■□□ 2.19
NME3-206ENST00000564252 USP17L21D6R901 530 aa28.75■■■□□ 2.19
NME3-206ENST00000564252 HOXC6P09630 235 aa28.75■■■□□ 2.19
NME3-206ENST00000564252 CDK8P49336 464 aa28.75■■■□□ 2.19
NME3-206ENST00000564252 ZSCAN25Q6NSZ9 544 aa28.75■■■□□ 2.19
NME3-206ENST00000564252 PUS7LQ9H0K6 701 aaKnown RBP28.75■■■□□ 2.19
NME3-206ENST00000564252 TMX2Q9Y320 296 aa28.75■■■□□ 2.19
NME3-206ENST00000564252 IVNS1ABPQ9Y6Y0 642 aa28.75■■■□□ 2.19
NME3-206ENST00000564252 PFASO15067 1338 aa28.74■■■□□ 2.19
NME3-206ENST00000564252 ICA1Q05084 483 aa28.74■■■□□ 2.19
NME3-206ENST00000564252 C16orf86Q6ZW13 317 aa28.74■■■□□ 2.19
NME3-206ENST00000564252 C7orf61Q8IZ16 206 aa28.74■■■□□ 2.19
NME3-206ENST00000564252 LPAR1Q92633 364 aa28.74■■■□□ 2.19
NME3-206ENST00000564252 CCDC17Q96LX7 622 aa28.74■■■□□ 2.19
NME3-206ENST00000564252 ARHGEF10LQ9HCE6 1279 aa28.74■■■□□ 2.19
NME3-206ENST00000564252 SLC4A4Q9Y6R1 1079 aa28.74■■■□□ 2.19
NME3-206ENST00000564252 AMOTL1Q8IY63 956 aa28.73■■■□□ 2.19
NME3-206ENST00000564252 MOV10L1Q9BXT6 1211 aaKnown RBP28.73■■■□□ 2.19
NME3-206ENST00000564252 ECHDC1Q9NTX5 307 aa28.73■■■□□ 2.19
NME3-206ENST00000564252 FRMPD3Q5JV73 1810 aa28.73■■■□□ 2.19
NME3-206ENST00000564252 ZNF236Q9UL36 1845 aa28.73■■■□□ 2.19
NME3-206ENST00000564252 COL6A1P12109 1028 aa28.72■■■□□ 2.19
NME3-206ENST00000564252 MFSD14CQ5VZR4 134 aa28.72■■■□□ 2.19
NME3-206ENST00000564252 NPLOC4Q8TAT6 608 aa28.72■■■□□ 2.19
NME3-206ENST00000564252 DDRGK1Q96HY6 314 aa28.72■■■□□ 2.19
NME3-206ENST00000564252 SPATC1LQ9H0A9 340 aa28.72■■■□□ 2.19
NME3-206ENST00000564252 SH2D4AQ9H788 454 aa28.72■■■□□ 2.19
NME3-206ENST00000564252 VCPKMTQ9H867 229 aa28.72■■■□□ 2.19
NME3-206ENST00000564252 STAP2Q9UGK3 403 aa28.72■■■□□ 2.19
NME3-206ENST00000564252 A0A1W2PPC1 479 aa28.71■■■□□ 2.19
NME3-206ENST00000564252 DSG3P32926 999 aa28.71■■■□□ 2.19
NME3-206ENST00000564252 CTR9Q6PD62 1173 aa28.71■■■□□ 2.19
NME3-206ENST00000564252 SPICE1Q8N0Z3 855 aa28.71■■■□□ 2.19
NME3-206ENST00000564252 DCTPP1Q9H773 170 aa28.71■■■□□ 2.19
NME3-206ENST00000564252 PARP14Q460N5 1801 aa28.71■■■□□ 2.19
NME3-206ENST00000564252 IGHA2P01877 340 aa28.7■■■□□ 2.18
NME3-206ENST00000564252 MB21D1Q8N884 522 aa28.7■■■□□ 2.18
NME3-206ENST00000564252 SHCBP1Q8NEM2 672 aa28.7■■■□□ 2.18
NME3-206ENST00000564252 ATP2B2Q01814 1243 aa28.69■■■□□ 2.18
NME3-206ENST00000564252 ZMYND8Q9ULU4 1186 aaPredicted RBP28.69■■■□□ 2.18
NME3-206ENST00000564252 DNAH12Q6ZR08 3092 aa28.69■■■□□ 2.18
NME3-206ENST00000564252 WDR46O15213 610 aaKnown RBP28.68■■■□□ 2.18
NME3-206ENST00000564252 FLOT1O75955 427 aa28.68■■■□□ 2.18
NME3-206ENST00000564252 ERCC3P19447 782 aa28.68■■■□□ 2.18
NME3-206ENST00000564252 ADORA2AP29274 412 aa28.68■■■□□ 2.18
NME3-206ENST00000564252 KBTBD3Q8NAB2 608 aa28.68■■■□□ 2.18
NME3-206ENST00000564252 ATG4CQ96DT6 458 aa28.68■■■□□ 2.18
NME3-206ENST00000564252 STRBPQ96SI9 672 aaKnown RBP28.68■■■□□ 2.18
NME3-206ENST00000564252 GDF15Q99988 308 aa28.68■■■□□ 2.18
NME3-206ENST00000564252 ARPP21Q9UBL0 812 aaPredicted RBP28.68■■■□□ 2.18
NME3-206ENST00000564252 STRNO43815 780 aa28.67■■■□□ 2.18
NME3-206ENST00000564252 EEF2P13639 858 aaKnown RBP28.67■■■□□ 2.18
NME3-206ENST00000564252 CYP2C19P33261 490 aa28.67■■■□□ 2.18
NME3-206ENST00000564252 TSHZ3Q63HK5 1081 aa28.67■■■□□ 2.18
NME3-206ENST00000564252 DPP9Q86TI2 863 aa28.66■■■□□ 2.18
NME3-206ENST00000564252 TRPV1Q8NER1 839 aa28.66■■■□□ 2.18
NME3-206ENST00000564252 GPATCH3Q96I76 525 aa28.66■■■□□ 2.18
NME3-206ENST00000564252 KANSL2Q9H9L4 492 aa28.66■■■□□ 2.18
NME3-206ENST00000564252 DDX20Q9UHI6 824 aaKnown RBP28.66■■■□□ 2.18
NME3-206ENST00000564252 GREB1LQ9C091 1923 aaPredicted RBP28.66■■■□□ 2.18
NME3-206ENST00000564252 GSG1L2A8MUP6 293 aa28.65■■■□□ 2.18
NME3-206ENST00000564252 SYN1P17600 705 aa28.65■■■□□ 2.18
NME3-206ENST00000564252 BMP8BP34820 402 aa28.65■■■□□ 2.18
NME3-206ENST00000564252 SBK1Q52WX2 424 aa28.65■■■□□ 2.18
NME3-206ENST00000564252 OLFML2BQ68BL8 750 aa28.65■■■□□ 2.18
NME3-206ENST00000564252 OSBP2Q969R2 916 aa28.65■■■□□ 2.18
NME3-206ENST00000564252 CYBAP13498 195 aa28.64■■■□□ 2.18
NME3-206ENST00000564252 PLS1Q14651 629 aa28.64■■■□□ 2.18
NME3-206ENST00000564252 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.64■■■□□ 2.18
NME3-206ENST00000564252 MROH8Q9H579 483 aa28.64■■■□□ 2.18
NME3-206ENST00000564252 MSCO60682 206 aa28.63■■■□□ 2.17
NME3-206ENST00000564252 COBLO75128 1261 aa28.63■■■□□ 2.17
NME3-206ENST00000564252 CNGA1P29973 690 aa28.63■■■□□ 2.17
NME3-206ENST00000564252 LRRC26Q2I0M4 334 aa28.63■■■□□ 2.17
NME3-206ENST00000564252 GIMAP6Q6P9H5 292 aa28.63■■■□□ 2.17
NME3-206ENST00000564252 APPBP2Q92624 585 aa28.63■■■□□ 2.17
NME3-206ENST00000564252 ADAMTS5Q9UNA0 930 aa28.63■■■□□ 2.17
NME3-206ENST00000564252 COL11A1P12107 1806 aaPredicted RBP28.63■■■□□ 2.17
NME3-206ENST00000564252 SOX1O00570 391 aaPredicted RBP28.62■■■□□ 2.17
NME3-206ENST00000564252 RNF113AO15541 343 aaKnown RBP28.62■■■□□ 2.17
NME3-206ENST00000564252 TMEM132BQ14DG7 1078 aa28.62■■■□□ 2.17
NME3-206ENST00000564252 NCAPG2Q86XI2 1143 aa28.62■■■□□ 2.17
NME3-206ENST00000564252 ABRAQ8N0Z2 381 aa28.62■■■□□ 2.17
NME3-206ENST00000564252 FBXO28Q9NVF7 368 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms