RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 PTGER2P43116 358 aa12.57□□□□□ -0.4
TCF4-222ENST00000564228 CHMP4BP1P59074 171 aa12.57□□□□□ -0.4
TCF4-222ENST00000564228 SLC9C2Q5TAH2 1124 aa12.57□□□□□ -0.4
TCF4-222ENST00000564228 CCDC129Q6ZRS4 1044 aa12.57□□□□□ -0.4
TCF4-222ENST00000564228 C15orf52Q6ZUT6 534 aaKnown RBP12.57□□□□□ -0.4
TCF4-222ENST00000564228 ZNF589Q86UQ0 364 aaPredicted RBP12.57□□□□□ -0.4
TCF4-222ENST00000564228 WDR24Q96S15 920 aa12.57□□□□□ -0.4
TCF4-222ENST00000564228 LRP2BPQ9P2M1 347 aa12.57□□□□□ -0.4
TCF4-222ENST00000564228 L1RE1Q9UN81 338 aa12.57□□□□□ -0.4
TCF4-222ENST00000564228 ZFYP08048 801 aaPredicted RBP12.56□□□□□ -0.4
TCF4-222ENST00000564228 SLC3A2P08195 630 aaKnown RBP12.56□□□□□ -0.4
TCF4-222ENST00000564228 TOP1P11387 765 aaKnown RBP12.56□□□□□ -0.4
TCF4-222ENST00000564228 USP8P40818 1118 aa12.56□□□□□ -0.4
TCF4-222ENST00000564228 UBASH3AP57075 661 aa12.56□□□□□ -0.4
TCF4-222ENST00000564228 TGFB2P61812 414 aa12.56□□□□□ -0.4
TCF4-222ENST00000564228 CEBPZQ03701 1054 aaKnown RBP12.56□□□□□ -0.4
TCF4-222ENST00000564228 MCMDC2Q4G0Z9 681 aa12.56□□□□□ -0.4
TCF4-222ENST00000564228 HSP90B2PQ58FF3 399 aa12.56□□□□□ -0.4
TCF4-222ENST00000564228 DHX58Q96C10 678 aa12.56□□□□□ -0.4
TCF4-222ENST00000564228 ZC3H12CQ9C0D7 883 aaKnown RBP12.56□□□□□ -0.4
TCF4-222ENST00000564228 TOMM22Q9NS69 142 aa12.56□□□□□ -0.4
TCF4-222ENST00000564228 DONSONQ9NYP3 566 aa12.56□□□□□ -0.4
TCF4-222ENST00000564228 PCDHA7Q9UN72 937 aa12.56□□□□□ -0.4
TCF4-222ENST00000564228 FAN1Q9Y2M0 1017 aa12.56□□□□□ -0.4
TCF4-222ENST00000564228 CUTAO60888 179 aa12.56□□□□□ -0.4
TCF4-222ENST00000564228 MAP3K12Q12852 859 aa12.56□□□□□ -0.4
TCF4-222ENST00000564228 COL9A3Q14050 684 aaPredicted RBP12.56□□□□□ -0.4
TCF4-222ENST00000564228 DNAJC21Q5F1R6 531 aaKnown RBP12.56□□□□□ -0.4
TCF4-222ENST00000564228 ZMYM1Q5SVZ6 1142 aa12.56□□□□□ -0.4
TCF4-222ENST00000564228 FOXR1Q6PIV2 292 aa12.56□□□□□ -0.4
TCF4-222ENST00000564228 NSUN7Q8NE18 718 aaKnown RBP12.56□□□□□ -0.4
TCF4-222ENST00000564228 KCNG4Q8TDN1 519 aa12.56□□□□□ -0.4
TCF4-222ENST00000564228 C7orf43Q8WVR3 580 aa12.56□□□□□ -0.4
TCF4-222ENST00000564228 TCEANC2Q96MN5 208 aa12.56□□□□□ -0.4
TCF4-222ENST00000564228 NEK1Q96PY6 1258 aa12.56□□□□□ -0.4
TCF4-222ENST00000564228 TACO1Q9BSH4 297 aaKnown RBP12.56□□□□□ -0.4
TCF4-222ENST00000564228 HSD3B7Q9H2F3 369 aa12.56□□□□□ -0.4
TCF4-222ENST00000564228 CXorf56Q9H5V9 222 aa12.56□□□□□ -0.4
TCF4-222ENST00000564228 ANKZF1Q9H8Y5 726 aa12.56□□□□□ -0.4
TCF4-222ENST00000564228 CD209Q9NNX6 404 aa12.56□□□□□ -0.4
TCF4-222ENST00000564228 CCDC196A0A1B0GTZ2 297 aa12.55□□□□□ -0.4
TCF4-222ENST00000564228 G3V3G9 751 aa12.55□□□□□ -0.4
TCF4-222ENST00000564228 YEATS4O95619 227 aa12.55□□□□□ -0.4
TCF4-222ENST00000564228 ADD2P35612 726 aa12.55□□□□□ -0.4
TCF4-222ENST00000564228 MYL5Q02045 173 aa12.55□□□□□ -0.4
TCF4-222ENST00000564228 TBX2Q13207 712 aaPredicted RBP12.55□□□□□ -0.4
TCF4-222ENST00000564228 DCAF8Q5TAQ9 597 aa12.55□□□□□ -0.4
TCF4-222ENST00000564228 MAGEB6Q8N7X4 407 aa12.55□□□□□ -0.4
TCF4-222ENST00000564228 CNNM3Q8NE01 707 aa12.55□□□□□ -0.4
TCF4-222ENST00000564228 OSBP2Q969R2 916 aa12.55□□□□□ -0.4
TCF4-222ENST00000564228 VIPAS39Q9H9C1 493 aa12.55□□□□□ -0.4
TCF4-222ENST00000564228 SPON1Q9HCB6 807 aa12.55□□□□□ -0.4
TCF4-222ENST00000564228 HELLSQ9NRZ9 838 aa12.55□□□□□ -0.4
TCF4-222ENST00000564228 RAI14Q9P0K7 980 aa12.55□□□□□ -0.4
TCF4-222ENST00000564228 PIM2Q9P1W9 311 aa12.55□□□□□ -0.4
TCF4-222ENST00000564228 MAST3O60307 1309 aa12.55□□□□□ -0.4
TCF4-222ENST00000564228 APPP05067 770 aa12.54□□□□□ -0.4
TCF4-222ENST00000564228 PDE6AP16499 860 aa12.54□□□□□ -0.4
TCF4-222ENST00000564228 LMOD1P29536 600 aaPredicted RBP12.54□□□□□ -0.4
TCF4-222ENST00000564228 NDUFA8P51970 172 aa12.54□□□□□ -0.4
TCF4-222ENST00000564228 SCRN1Q12765 414 aa12.54□□□□□ -0.4
TCF4-222ENST00000564228 Q6ZUG5 572 aa12.54□□□□□ -0.4
TCF4-222ENST00000564228 TICAM2Q86XR7 235 aa12.54□□□□□ -0.4
TCF4-222ENST00000564228 APPBP2Q92624 585 aa12.54□□□□□ -0.4
TCF4-222ENST00000564228 EYA3Q99504 573 aa12.54□□□□□ -0.4
TCF4-222ENST00000564228 BAG1Q99933 345 aaPredicted RBP12.54□□□□□ -0.4
TCF4-222ENST00000564228 FTOQ9C0B1 505 aaKnown RBP eCLIP12.54□□□□□ -0.4
TCF4-222ENST00000564228 CDC23Q9UJX2 597 aa12.54□□□□□ -0.4
TCF4-222ENST00000564228 ZNF532Q9HCE3 1301 aa12.54□□□□□ -0.4
TCF4-222ENST00000564228 SALL1Q9NSC2 1324 aa12.54□□□□□ -0.4
TCF4-222ENST00000564228 MYH2Q9UKX2 1941 aa12.54□□□□□ -0.4
TCF4-222ENST00000564228 MAST2Q6P0Q8 1798 aa12.54□□□□□ -0.4
TCF4-222ENST00000564228 M0R2C6 588 aa12.54□□□□□ -0.4
TCF4-222ENST00000564228 AARSP49588 968 aaKnown RBP eCLIP12.54□□□□□ -0.4
TCF4-222ENST00000564228 MCM6Q14566 821 aa12.54□□□□□ -0.4
TCF4-222ENST00000564228 DOK7Q18PE1 504 aa12.54□□□□□ -0.4
TCF4-222ENST00000564228 CT47A1Q5JQC4 288 aaPredicted RBP12.54□□□□□ -0.4
TCF4-222ENST00000564228 CC2D2BQ6DHV5 1058 aa12.54□□□□□ -0.4
TCF4-222ENST00000564228 CTCFLQ8NI51 663 aaPredicted RBP12.54□□□□□ -0.4
TCF4-222ENST00000564228 ERCC4Q92889 916 aaPredicted RBP12.54□□□□□ -0.4
TCF4-222ENST00000564228 PUS7LQ9H0K6 701 aaKnown RBP12.54□□□□□ -0.4
TCF4-222ENST00000564228 TUBE1Q9UJT0 475 aa12.54□□□□□ -0.4
TCF4-222ENST00000564228 CD2APQ9Y5K6 639 aa12.54□□□□□ -0.4
TCF4-222ENST00000564228 PDS5AQ29RF7 1337 aaKnown RBP12.54□□□□□ -0.4
TCF4-222ENST00000564228 SCN9AQ15858 1988 aa12.53□□□□□ -0.4
TCF4-222ENST00000564228 SERPINC1P01008 464 aa12.53□□□□□ -0.4
TCF4-222ENST00000564228 HMGB1P09429 215 aaKnown RBP12.53□□□□□ -0.4
TCF4-222ENST00000564228 IL1R1P14778 569 aa12.53□□□□□ -0.4
TCF4-222ENST00000564228 BRD2P25440 801 aaKnown RBP12.53□□□□□ -0.4
TCF4-222ENST00000564228 CASP8Q14790 479 aa12.53□□□□□ -0.4
TCF4-222ENST00000564228 GPATCH11Q8N954 259 aa12.53□□□□□ -0.4
TCF4-222ENST00000564228 FBXW7Q969H0 707 aa12.53□□□□□ -0.4
TCF4-222ENST00000564228 COA1Q9GZY4 146 aa12.53□□□□□ -0.4
TCF4-222ENST00000564228 POLR3EQ9NVU0 708 aa12.53□□□□□ -0.4
TCF4-222ENST00000564228 TAF6LQ9Y6J9 622 aa12.53□□□□□ -0.4
TCF4-222ENST00000564228 A0A1B0GVL5 298 aa12.52□□□□□ -0.4
TCF4-222ENST00000564228 PTPDC1A2A3K4 754 aa12.52□□□□□ -0.4
TCF4-222ENST00000564228 ATP1A3P13637 1013 aa12.52□□□□□ -0.4
TCF4-222ENST00000564228 PRDX5P30044 214 aa12.52□□□□□ -0.4
TCF4-222ENST00000564228 SART3Q15020 963 aaKnown RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms