RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 VCPKMTQ9H867 229 aa17.68■□□□□ 0.42
RPUSD1-204ENST00000563560 PDE4DIPQ5VU43 2346 aa17.67■□□□□ 0.42
RPUSD1-204ENST00000563560 ECM2O94769 699 aaPredicted RBP17.67■□□□□ 0.42
RPUSD1-204ENST00000563560 FMNL1O95466 1100 aaPredicted RBP17.67■□□□□ 0.42
RPUSD1-204ENST00000563560 ERVK-9P63128 1117 aa17.67■□□□□ 0.42
RPUSD1-204ENST00000563560 ERVK-24P63145 666 aa17.67■□□□□ 0.42
RPUSD1-204ENST00000563560 IRX3P78415 501 aaPredicted RBP17.67■□□□□ 0.42
RPUSD1-204ENST00000563560 IRF5Q13568 498 aa17.67■□□□□ 0.42
RPUSD1-204ENST00000563560 SH3TC2Q8TF17 1288 aa17.67■□□□□ 0.42
RPUSD1-204ENST00000563560 FEZ1Q99689 392 aa17.67■□□□□ 0.42
RPUSD1-204ENST00000563560 RPAP3Q9H6T3 665 aaPredicted RBP17.67■□□□□ 0.42
RPUSD1-204ENST00000563560 KANSL2Q9H9L4 492 aa17.67■□□□□ 0.42
RPUSD1-204ENST00000563560 BTBD7Q9P203 1132 aa17.67■□□□□ 0.42
RPUSD1-204ENST00000563560 ZNFX1Q9P2E3 1918 aaKnown RBP17.66■□□□□ 0.42
RPUSD1-204ENST00000563560 POTEFA5A3E0 1075 aa17.66■□□□□ 0.42
RPUSD1-204ENST00000563560 PRDM1O75626 825 aa17.66■□□□□ 0.42
RPUSD1-204ENST00000563560 CENPBP07199 599 aaPredicted RBP17.66■□□□□ 0.42
RPUSD1-204ENST00000563560 HSPD1P10809 573 aaKnown RBP17.66■□□□□ 0.42
RPUSD1-204ENST00000563560 NOVP48745 357 aa17.66■□□□□ 0.42
RPUSD1-204ENST00000563560 FLT3LGP49771 235 aa17.66■□□□□ 0.42
RPUSD1-204ENST00000563560 TTC22Q5TAA0 569 aa17.66■□□□□ 0.42
RPUSD1-204ENST00000563560 NKX2-3Q8TAU0 364 aa17.66■□□□□ 0.42
RPUSD1-204ENST00000563560 LPAR1Q92633 364 aa17.66■□□□□ 0.42
RPUSD1-204ENST00000563560 USP6NLQ92738 828 aa17.66■□□□□ 0.42
RPUSD1-204ENST00000563560 NAPBQ9H115 298 aa17.66■□□□□ 0.42
RPUSD1-204ENST00000563560 PORCNQ9H237 461 aa17.66■□□□□ 0.42
RPUSD1-204ENST00000563560 INCENPQ9NQS7 918 aa17.66■□□□□ 0.42
RPUSD1-204ENST00000563560 NYAP2Q9P242 653 aa17.66■□□□□ 0.42
RPUSD1-204ENST00000563560 ADAMTS5Q9UNA0 930 aa17.66■□□□□ 0.42
RPUSD1-204ENST00000563560 CCDC171Q6TFL3 1326 aa17.66■□□□□ 0.42
RPUSD1-204ENST00000563560 TRIM6-TRIM34B2RNG4 842 aa17.65■□□□□ 0.42
RPUSD1-204ENST00000563560 FGAP02671 866 aa17.65■□□□□ 0.42
RPUSD1-204ENST00000563560 APPP05067 770 aa17.65■□□□□ 0.42
RPUSD1-204ENST00000563560 HOXD10P28358 340 aa17.65■□□□□ 0.42
RPUSD1-204ENST00000563560 SLC9C1Q4G0N8 1177 aa17.65■□□□□ 0.42
RPUSD1-204ENST00000563560 STK11IPQ8N1F8 1099 aa17.65■□□□□ 0.42
RPUSD1-204ENST00000563560 NEDD1Q8NHV4 660 aa17.65■□□□□ 0.42
RPUSD1-204ENST00000563560 GTF3C2Q8WUA4 911 aaPredicted RBP17.65■□□□□ 0.42
RPUSD1-204ENST00000563560 MKL1Q969V6 931 aa17.65■□□□□ 0.42
RPUSD1-204ENST00000563560 RILPL2Q969X0 211 aa17.65■□□□□ 0.42
RPUSD1-204ENST00000563560 NACAP1Q9BZK3 213 aa17.65■□□□□ 0.42
RPUSD1-204ENST00000563560 RABGAP1Q9Y3P9 1069 aa17.65■□□□□ 0.42
RPUSD1-204ENST00000563560 TNPO2O14787 897 aaKnown RBP17.64■□□□□ 0.41
RPUSD1-204ENST00000563560 GPRC5AQ8NFJ5 357 aa17.64■□□□□ 0.41
RPUSD1-204ENST00000563560 CEP95Q96GE4 821 aa17.64■□□□□ 0.41
RPUSD1-204ENST00000563560 ARHGEF10LQ9HCE6 1279 aa17.64■□□□□ 0.41
RPUSD1-204ENST00000563560 MTMR4Q9NYA4 1195 aa17.64■□□□□ 0.41
RPUSD1-204ENST00000563560 WDR46O15213 610 aaKnown RBP17.63■□□□□ 0.41
RPUSD1-204ENST00000563560 IGHA2P01877 340 aa17.63■□□□□ 0.41
RPUSD1-204ENST00000563560 GRK4P32298 578 aa17.63■□□□□ 0.41
RPUSD1-204ENST00000563560 CTDSPL2Q05D32 466 aa17.63■□□□□ 0.41
RPUSD1-204ENST00000563560 MTFR1Q15390 333 aa17.63■□□□□ 0.41
RPUSD1-204ENST00000563560 PXYLP1Q8TE99 480 aa17.63■□□□□ 0.41
RPUSD1-204ENST00000563560 MKNK2Q9HBH9 465 aa17.63■□□□□ 0.41
RPUSD1-204ENST00000563560 IL17RBQ9NRM6 502 aa17.63■□□□□ 0.41
RPUSD1-204ENST00000563560 FRMPD3Q5JV73 1810 aa17.63■□□□□ 0.41
RPUSD1-204ENST00000563560 ORC4O43929 436 aa17.62■□□□□ 0.41
RPUSD1-204ENST00000563560 DSG3P32926 999 aa17.62■□□□□ 0.41
RPUSD1-204ENST00000563560 COG2Q14746 738 aa17.62■□□□□ 0.41
RPUSD1-204ENST00000563560 MORN1Q5T089 497 aa17.62■□□□□ 0.41
RPUSD1-204ENST00000563560 SPICE1Q8N0Z3 855 aa17.62■□□□□ 0.41
RPUSD1-204ENST00000563560 REPS2Q8NFH8 660 aa17.62■□□□□ 0.41
RPUSD1-204ENST00000563560 SH2D4AQ9H788 454 aa17.62■□□□□ 0.41
RPUSD1-204ENST00000563560 SYNPO2Q9UMS6 1093 aa17.62■□□□□ 0.41
RPUSD1-204ENST00000563560 FAM47AQ5JRC9 791 aa17.61■□□□□ 0.41
RPUSD1-204ENST00000563560 GPR142Q7Z601 462 aa17.61■□□□□ 0.41
RPUSD1-204ENST00000563560 SLAIN1Q8ND83 568 aa17.61■□□□□ 0.41
RPUSD1-204ENST00000563560 RAET1EQ8TD07 263 aa17.61■□□□□ 0.41
RPUSD1-204ENST00000563560 SHISA4Q96DD7 197 aa17.61■□□□□ 0.41
RPUSD1-204ENST00000563560 PLXNA1Q9UIW2 1896 aa17.61■□□□□ 0.41
RPUSD1-204ENST00000563560 ADCY3O60266 1144 aa17.6■□□□□ 0.41
RPUSD1-204ENST00000563560 ELNP15502 786 aa17.6■□□□□ 0.41
RPUSD1-204ENST00000563560 TFAP4Q01664 338 aa17.6■□□□□ 0.41
RPUSD1-204ENST00000563560 PDE4BQ07343 736 aa17.6■□□□□ 0.41
RPUSD1-204ENST00000563560 CWC27Q6UX04 472 aaKnown RBP17.6■□□□□ 0.41
RPUSD1-204ENST00000563560 NBPF11Q86T75 865 aa17.6■□□□□ 0.41
RPUSD1-204ENST00000563560 TBC1D10CQ8IV04 446 aa17.6■□□□□ 0.41
RPUSD1-204ENST00000563560 ZNF444Q8N0Y2 327 aaPredicted RBP17.6■□□□□ 0.41
RPUSD1-204ENST00000563560 COA7Q96BR5 231 aa17.6■□□□□ 0.41
RPUSD1-204ENST00000563560 ATG4CQ96DT6 458 aa17.6■□□□□ 0.41
RPUSD1-204ENST00000563560 PAGR1Q9BTK6 254 aa17.6■□□□□ 0.41
RPUSD1-204ENST00000563560 ZNF287Q9HBT7 754 aa17.6■□□□□ 0.41
RPUSD1-204ENST00000563560 FBXO28Q9NVF7 368 aa17.6■□□□□ 0.41
RPUSD1-204ENST00000563560 HOXC10Q9NYD6 342 aa17.6■□□□□ 0.41
RPUSD1-204ENST00000563560 SMCHD1A6NHR9 2005 aa17.59■□□□□ 0.41
RPUSD1-204ENST00000563560 F5H6K3 240 aa17.59■□□□□ 0.41
RPUSD1-204ENST00000563560 NDUFB10O96000 172 aa17.59■□□□□ 0.41
RPUSD1-204ENST00000563560 EN2P19622 333 aaPredicted RBP17.59■□□□□ 0.41
RPUSD1-204ENST00000563560 MAPK4P31152 587 aa17.59■□□□□ 0.41
RPUSD1-204ENST00000563560 KLRC3Q07444 240 aa17.59■□□□□ 0.41
RPUSD1-204ENST00000563560 GMCL1P1Q8NEA9 526 aa17.59■□□□□ 0.41
RPUSD1-204ENST00000563560 NMT2O60551 498 aa17.58■□□□□ 0.4
RPUSD1-204ENST00000563560 TTLL1O95922 423 aa17.58■□□□□ 0.4
RPUSD1-204ENST00000563560 XRCC5P13010 732 aaKnown RBP17.58■□□□□ 0.4
RPUSD1-204ENST00000563560 MLLT1Q03111 559 aaPredicted RBP17.58■□□□□ 0.4
RPUSD1-204ENST00000563560 TMEM132BQ14DG7 1078 aa17.58■□□□□ 0.4
RPUSD1-204ENST00000563560 FAM83BQ5T0W9 1011 aa17.58■□□□□ 0.4
RPUSD1-204ENST00000563560 MAP3K21Q5TCX8 1036 aa17.58■□□□□ 0.4
RPUSD1-204ENST00000563560 PLEKHH3Q7Z736 793 aa17.58■□□□□ 0.4
RPUSD1-204ENST00000563560 UBE2Q1Q7Z7E8 422 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms