RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 ATG4CQ96DT6 458 aa8.34□□□□□ -1.07
CDH11-208ENST00000563492 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.34□□□□□ -1.07
CDH11-208ENST00000563492 MOV10L1Q9BXT6 1211 aaKnown RBP8.34□□□□□ -1.07
CDH11-208ENST00000563492 LRRCC1Q9C099 1032 aa8.34□□□□□ -1.07
CDH11-208ENST00000563492 TANGO6Q9C0B7 1094 aa8.34□□□□□ -1.07
CDH11-208ENST00000563492 C11orf49Q9H6J7 331 aa8.34□□□□□ -1.07
CDH11-208ENST00000563492 CWC22Q9HCG8 908 aaKnown RBP8.34□□□□□ -1.07
CDH11-208ENST00000563492 FBXO28Q9NVF7 368 aa8.34□□□□□ -1.07
CDH11-208ENST00000563492 SLC4A4Q9Y6R1 1079 aa8.34□□□□□ -1.07
CDH11-208ENST00000563492 MAST2Q6P0Q8 1798 aa8.34□□□□□ -1.07
CDH11-208ENST00000563492 ATAD5Q96QE3 1844 aa8.33□□□□□ -1.08
CDH11-208ENST00000563492 SLC15A5A6NIM6 579 aa8.33□□□□□ -1.08
CDH11-208ENST00000563492 IGHA2P01877 340 aa8.33□□□□□ -1.08
CDH11-208ENST00000563492 COL6A1P12109 1028 aa8.33□□□□□ -1.08
CDH11-208ENST00000563492 EEF2P13639 858 aaKnown RBP8.33□□□□□ -1.08
CDH11-208ENST00000563492 ERCC3P19447 782 aa8.33□□□□□ -1.08
CDH11-208ENST00000563492 ATP2B2Q01814 1243 aa8.33□□□□□ -1.08
CDH11-208ENST00000563492 GRB14Q14449 540 aa8.33□□□□□ -1.08
CDH11-208ENST00000563492 LRRC26Q2I0M4 334 aa8.33□□□□□ -1.08
CDH11-208ENST00000563492 PRAMEF19Q5SWL8 479 aa8.33□□□□□ -1.08
CDH11-208ENST00000563492 ANO1Q5XXA6 986 aa8.33□□□□□ -1.08
CDH11-208ENST00000563492 TMED8Q6PL24 325 aaPredicted RBP8.33□□□□□ -1.08
CDH11-208ENST00000563492 TMEM179Q6ZVK1 233 aa8.33□□□□□ -1.08
CDH11-208ENST00000563492 ANKLE1Q8NAG6 615 aa8.33□□□□□ -1.08
CDH11-208ENST00000563492 OTUD7AQ8TE49 926 aaPredicted RBP8.33□□□□□ -1.08
CDH11-208ENST00000563492 OSBP2Q969R2 916 aa8.33□□□□□ -1.08
CDH11-208ENST00000563492 CDK5RAP2Q96SN8 1893 aa8.33□□□□□ -1.08
CDH11-208ENST00000563492 APBA2Q99767 749 aa8.33□□□□□ -1.08
CDH11-208ENST00000563492 GDF15Q99988 308 aa8.33□□□□□ -1.08
CDH11-208ENST00000563492 TMX2Q9Y320 296 aa8.33□□□□□ -1.08
CDH11-208ENST00000563492 PLXNB2O15031 1838 aa8.33□□□□□ -1.08
CDH11-208ENST00000563492 LAMA3Q16787 3333 aa8.32□□□□□ -1.08
CDH11-208ENST00000563492 FLOT1O75955 427 aa8.32□□□□□ -1.08
CDH11-208ENST00000563492 ADORA2AP29274 412 aa8.32□□□□□ -1.08
CDH11-208ENST00000563492 CNGA1P29973 690 aa8.32□□□□□ -1.08
CDH11-208ENST00000563492 DSG3P32926 999 aa8.32□□□□□ -1.08
CDH11-208ENST00000563492 MAGEA10P43363 369 aaPredicted RBP8.32□□□□□ -1.08
CDH11-208ENST00000563492 CCNA1P78396 465 aa8.32□□□□□ -1.08
CDH11-208ENST00000563492 ICA1Q05084 483 aa8.32□□□□□ -1.08
CDH11-208ENST00000563492 PLS1Q14651 629 aa8.32□□□□□ -1.08
CDH11-208ENST00000563492 UBE3CQ15386 1083 aa8.32□□□□□ -1.08
CDH11-208ENST00000563492 MFSD14CQ5VZR4 134 aa8.32□□□□□ -1.08
CDH11-208ENST00000563492 C16orf86Q6ZW13 317 aa8.32□□□□□ -1.08
CDH11-208ENST00000563492 GTF3C2Q8WUA4 911 aaPredicted RBP8.32□□□□□ -1.08
CDH11-208ENST00000563492 STRBPQ96SI9 672 aaKnown RBP8.32□□□□□ -1.08
CDH11-208ENST00000563492 NUP88Q99567 741 aaPredicted RBP8.32□□□□□ -1.08
CDH11-208ENST00000563492 SPATC1LQ9H0A9 340 aa8.32□□□□□ -1.08
CDH11-208ENST00000563492 VCPKMTQ9H867 229 aa8.32□□□□□ -1.08
CDH11-208ENST00000563492 ATP8A2Q9NTI2 1148 aa8.32□□□□□ -1.08
CDH11-208ENST00000563492 HOXC10Q9NYD6 342 aa8.32□□□□□ -1.08
CDH11-208ENST00000563492 SWAP70Q9UH65 585 aa8.32□□□□□ -1.08
CDH11-208ENST00000563492 PCDHB15Q9Y5E8 787 aa8.32□□□□□ -1.08
CDH11-208ENST00000563492 GSG1L2A8MUP6 293 aa8.31□□□□□ -1.08
CDH11-208ENST00000563492 M0R2C6 588 aa8.31□□□□□ -1.08
CDH11-208ENST00000563492 HOXC6P09630 235 aa8.31□□□□□ -1.08
CDH11-208ENST00000563492 ATN1P54259 1190 aaPredicted RBP8.31□□□□□ -1.08
CDH11-208ENST00000563492 TMEM132BQ14DG7 1078 aa8.31□□□□□ -1.08
CDH11-208ENST00000563492 GJC2Q5T442 439 aaPredicted RBP8.31□□□□□ -1.08
CDH11-208ENST00000563492 DPP9Q86TI2 863 aa8.31□□□□□ -1.08
CDH11-208ENST00000563492 NCAPG2Q86XI2 1143 aa8.31□□□□□ -1.08
CDH11-208ENST00000563492 TRMT44Q8IYL2 757 aaKnown RBP8.31□□□□□ -1.08
CDH11-208ENST00000563492 SEC62Q99442 399 aaKnown RBP8.31□□□□□ -1.08
CDH11-208ENST00000563492 SENP6Q9GZR1 1112 aaPredicted RBP8.31□□□□□ -1.08
CDH11-208ENST00000563492 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.31□□□□□ -1.08
CDH11-208ENST00000563492 DCTPP1Q9H773 170 aa8.31□□□□□ -1.08
CDH11-208ENST00000563492 EPB41L4AQ9HCS5 686 aaPredicted RBP8.31□□□□□ -1.08
CDH11-208ENST00000563492 ECHDC1Q9NTX5 307 aa8.31□□□□□ -1.08
CDH11-208ENST00000563492 DDX20Q9UHI6 824 aaKnown RBP8.31□□□□□ -1.08
CDH11-208ENST00000563492 IVNS1ABPQ9Y6Y0 642 aa8.31□□□□□ -1.08
CDH11-208ENST00000563492 FOCADQ5VW36 1801 aa8.31□□□□□ -1.08
CDH11-208ENST00000563492 MYH1P12882 1939 aa8.31□□□□□ -1.08
CDH11-208ENST00000563492 MINDY4BA8MYZ0 360 aa8.3□□□□□ -1.08
CDH11-208ENST00000563492 RAD21O60216 631 aa8.3□□□□□ -1.08
CDH11-208ENST00000563492 PRDM1O75626 825 aa8.3□□□□□ -1.08
CDH11-208ENST00000563492 GLRX3O76003 335 aaKnown RBP8.3□□□□□ -1.08
CDH11-208ENST00000563492 MYCNP04198 464 aaPredicted RBP8.3□□□□□ -1.08
CDH11-208ENST00000563492 PGK2P07205 417 aa8.3□□□□□ -1.08
CDH11-208ENST00000563492 CYBAP13498 195 aa8.3□□□□□ -1.08
CDH11-208ENST00000563492 TAL1P17542 331 aaPredicted RBP8.3□□□□□ -1.08
CDH11-208ENST00000563492 CAPN2P17655 700 aa8.3□□□□□ -1.08
CDH11-208ENST00000563492 RASA1P20936 1047 aa8.3□□□□□ -1.08
CDH11-208ENST00000563492 MDM2Q00987 491 aaPredicted RBP8.3□□□□□ -1.08
CDH11-208ENST00000563492 FAM83BQ5T0W9 1011 aa8.3□□□□□ -1.08
CDH11-208ENST00000563492 Q7L0L9 218 aa8.3□□□□□ -1.08
CDH11-208ENST00000563492 KBTBD3Q8NAB2 608 aa8.3□□□□□ -1.08
CDH11-208ENST00000563492 CHMP4CQ96CF2 233 aa8.3□□□□□ -1.08
CDH11-208ENST00000563492 CCDC17Q96LX7 622 aa8.3□□□□□ -1.08
CDH11-208ENST00000563492 ARHGEF10LQ9HCE6 1279 aa8.3□□□□□ -1.08
CDH11-208ENST00000563492 DDX60LQ5H9U9 1706 aaKnown RBP8.29□□□□□ -1.08
CDH11-208ENST00000563492 RNF113AO15541 343 aaKnown RBP8.29□□□□□ -1.08
CDH11-208ENST00000563492 BMP8BP34820 402 aa8.29□□□□□ -1.08
CDH11-208ENST00000563492 SHCBP1Q8NEM2 672 aa8.29□□□□□ -1.08
CDH11-208ENST00000563492 REPS2Q8NFH8 660 aa8.29□□□□□ -1.08
CDH11-208ENST00000563492 LPAR1Q92633 364 aa8.29□□□□□ -1.08
CDH11-208ENST00000563492 KANSL2Q9H9L4 492 aa8.29□□□□□ -1.08
CDH11-208ENST00000563492 INCENPQ9NQS7 918 aa8.29□□□□□ -1.08
CDH11-208ENST00000563492 ADAMTS5Q9UNA0 930 aa8.29□□□□□ -1.08
CDH11-208ENST00000563492 VWA5AO00534 786 aa8.28□□□□□ -1.08
CDH11-208ENST00000563492 WDR46O15213 610 aaKnown RBP8.28□□□□□ -1.08
CDH11-208ENST00000563492 GPAA1O43292 621 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms