RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 PARP14Q460N5 1801 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 CCDC196A0A1B0GTZ2 297 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 CDKL5O76039 1030 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 SYT1P21579 422 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 ATP2B2Q01814 1243 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 FUT2Q10981 343 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 CPLX2Q6PUV4 134 aaKnown RBP11.84□□□□□ -0.51
SMG1-208ENST00000563448 SULF1Q8IWU6 871 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 STAG2Q8N3U4 1231 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 PHKBQ93100 1093 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 HOOK2Q96ED9 719 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 ZNF341Q9BYN7 854 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 ZNF112Q9UJU3 913 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 FZD1Q9UP38 647 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 MTMR7Q9Y216 660 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 PALM3A6NDB9 673 aaPredicted RBP11.83□□□□□ -0.52
SMG1-208ENST00000563448 USP17L5A8MUK1 530 aa11.83□□□□□ -0.52
SMG1-208ENST00000563448 NUCB2P80303 420 aa11.83□□□□□ -0.52
SMG1-208ENST00000563448 LARP1BQ659C4 914 aaKnown RBP11.83□□□□□ -0.52
SMG1-208ENST00000563448 TMTC3Q6ZXV5 915 aa11.83□□□□□ -0.52
SMG1-208ENST00000563448 KRT26Q7Z3Y9 468 aa11.83□□□□□ -0.52
SMG1-208ENST00000563448 PNMA8AQ86V59 439 aaPredicted RBP11.83□□□□□ -0.52
SMG1-208ENST00000563448 CCDC82Q8N4S0 544 aa11.83□□□□□ -0.52
SMG1-208ENST00000563448 RRAGCQ9HB90 399 aa11.83□□□□□ -0.52
SMG1-208ENST00000563448 STK36Q9NRP7 1315 aa11.83□□□□□ -0.52
SMG1-208ENST00000563448 TRPM7Q96QT4 1865 aa11.83□□□□□ -0.52
SMG1-208ENST00000563448 A0A1W2PRG0 241 aa11.82□□□□□ -0.52
SMG1-208ENST00000563448 FMNL1O95466 1100 aaPredicted RBP11.82□□□□□ -0.52
SMG1-208ENST00000563448 BRD1O95696 1058 aa11.82□□□□□ -0.52
SMG1-208ENST00000563448 POTEIP0CG38 1075 aa11.82□□□□□ -0.52
SMG1-208ENST00000563448 POTEJP0CG39 1038 aa11.82□□□□□ -0.52
SMG1-208ENST00000563448 SNHG28P0DPA3 235 aa11.82□□□□□ -0.52
SMG1-208ENST00000563448 SSRP1Q08945 709 aaKnown RBP11.82□□□□□ -0.52
SMG1-208ENST00000563448 SUPT20HL1Q3ZLR7 823 aa11.82□□□□□ -0.52
SMG1-208ENST00000563448 USP48Q86UV5 1035 aa11.82□□□□□ -0.52
SMG1-208ENST00000563448 SRBD1Q8N5C6 995 aaKnown RBP11.82□□□□□ -0.52
SMG1-208ENST00000563448 FAM184AQ8NB25 1140 aa11.82□□□□□ -0.52
SMG1-208ENST00000563448 ANP32EQ9BTT0 268 aa11.82□□□□□ -0.52
SMG1-208ENST00000563448 SLC26A6Q9BXS9 759 aa11.82□□□□□ -0.52
SMG1-208ENST00000563448 ORC3Q9UBD5 711 aaPredicted RBP11.82□□□□□ -0.52
SMG1-208ENST00000563448 CNTNAP5Q8WYK1 1306 aa11.82□□□□□ -0.52
SMG1-208ENST00000563448 UBE2Q2LH0YL09 131 aa11.82□□□□□ -0.52
SMG1-208ENST00000563448 STX6O43752 255 aa11.82□□□□□ -0.52
SMG1-208ENST00000563448 CTNND1O60716 968 aaKnown RBP11.82□□□□□ -0.52
SMG1-208ENST00000563448 PDHBP11177 359 aa11.82□□□□□ -0.52
SMG1-208ENST00000563448 INPP5BP32019 993 aa11.82□□□□□ -0.52
SMG1-208ENST00000563448 KIF5BP33176 963 aa11.82□□□□□ -0.52
SMG1-208ENST00000563448 USP17L2Q6R6M4 530 aa11.82□□□□□ -0.52
SMG1-208ENST00000563448 GLIS2Q9BZE0 524 aaPredicted RBP11.82□□□□□ -0.52
SMG1-208ENST00000563448 USP2O75604 605 aaPredicted RBP11.81□□□□□ -0.52
SMG1-208ENST00000563448 ASNSP08243 561 aa11.81□□□□□ -0.52
SMG1-208ENST00000563448 PARP1P09874 1014 aaKnown RBP11.81□□□□□ -0.52
SMG1-208ENST00000563448 GOLGA8HP0CJ92 632 aa11.81□□□□□ -0.52
SMG1-208ENST00000563448 ECE1P42892 770 aa11.81□□□□□ -0.52
SMG1-208ENST00000563448 SLC35G1Q2M3R5 365 aa11.81□□□□□ -0.52
SMG1-208ENST00000563448 CCDC84Q86UT8 332 aaPredicted RBP11.81□□□□□ -0.52
SMG1-208ENST00000563448 KLRG1Q96E93 195 aa11.81□□□□□ -0.52
SMG1-208ENST00000563448 AIFM3Q96NN9 605 aa11.81□□□□□ -0.52
SMG1-208ENST00000563448 RNF26Q9BY78 433 aaPredicted RBP11.81□□□□□ -0.52
SMG1-208ENST00000563448 MTMR6Q9Y217 621 aa11.81□□□□□ -0.52
SMG1-208ENST00000563448 PRPF3O43395 683 aaKnown RBP11.81□□□□□ -0.52
SMG1-208ENST00000563448 VEGFAP15692 232 aaPredicted RBP11.81□□□□□ -0.52
SMG1-208ENST00000563448 PDCP20941 246 aa11.81□□□□□ -0.52
SMG1-208ENST00000563448 FOSBP53539 338 aa11.81□□□□□ -0.52
SMG1-208ENST00000563448 FOXD4L5Q5VV16 416 aaPredicted RBP11.81□□□□□ -0.52
SMG1-208ENST00000563448 ACER1Q8TDN7 264 aa11.81□□□□□ -0.52
SMG1-208ENST00000563448 FOXD4L4Q8WXT5 416 aaPredicted RBP11.81□□□□□ -0.52
SMG1-208ENST00000563448 TNPO1Q92973 898 aaKnown RBP11.81□□□□□ -0.52
SMG1-208ENST00000563448 ZKSCAN4Q969J2 545 aaPredicted RBP11.81□□□□□ -0.52
SMG1-208ENST00000563448 CDCA5Q96FF9 252 aa11.81□□□□□ -0.52
SMG1-208ENST00000563448 WRNIP1Q96S55 665 aa11.81□□□□□ -0.52
SMG1-208ENST00000563448 ARHGEF10LQ9HCE6 1279 aa11.81□□□□□ -0.52
SMG1-208ENST00000563448 GINM1Q9NU53 330 aa11.81□□□□□ -0.52
SMG1-208ENST00000563448 CLEC11AQ9Y240 323 aa11.81□□□□□ -0.52
SMG1-208ENST00000563448 TMX2Q9Y320 296 aa11.81□□□□□ -0.52
SMG1-208ENST00000563448 FRMPD2Q68DX3 1309 aaPredicted RBP11.8□□□□□ -0.52
SMG1-208ENST00000563448 SMCHD1A6NHR9 2005 aa11.8□□□□□ -0.52
SMG1-208ENST00000563448 VPS37CA5D8V6 355 aaPredicted RBP11.8□□□□□ -0.52
SMG1-208ENST00000563448 KLRF2D3W0D1 207 aa11.8□□□□□ -0.52
SMG1-208ENST00000563448 CYTH3O43739 400 aa11.8□□□□□ -0.52
SMG1-208ENST00000563448 GNAQP50148 359 aa11.8□□□□□ -0.52
SMG1-208ENST00000563448 PRKG1Q13976 671 aa11.8□□□□□ -0.52
SMG1-208ENST00000563448 ASPRV1Q53RT3 343 aa11.8□□□□□ -0.52
SMG1-208ENST00000563448 SLFN13Q68D06 897 aa11.8□□□□□ -0.52
SMG1-208ENST00000563448 CDC37L1Q7L3B6 337 aa11.8□□□□□ -0.52
SMG1-208ENST00000563448 TRIM22Q8IYM9 498 aa11.8□□□□□ -0.52
SMG1-208ENST00000563448 SCYL3Q8IZE3 742 aa11.8□□□□□ -0.52
SMG1-208ENST00000563448 GMCL1P1Q8NEA9 526 aa11.8□□□□□ -0.52
SMG1-208ENST00000563448 ALG1Q9BT22 464 aa11.8□□□□□ -0.52
SMG1-208ENST00000563448 CPVLQ9H3G5 476 aa11.8□□□□□ -0.52
SMG1-208ENST00000563448 SYNPO2Q9UMS6 1093 aa11.8□□□□□ -0.52
SMG1-208ENST00000563448 KIF3AQ9Y496 699 aa11.8□□□□□ -0.52
SMG1-208ENST00000563448 WDR33Q9C0J8 1336 aaKnown RBP11.8□□□□□ -0.52
SMG1-208ENST00000563448 hCG_1642624A0A1W2PR95 340 aa11.79□□□□□ -0.52
SMG1-208ENST00000563448 F5H6K3 240 aa11.79□□□□□ -0.52
SMG1-208ENST00000563448 DEXIO95424 95 aa11.79□□□□□ -0.52
SMG1-208ENST00000563448 ZSCAN22P10073 491 aaPredicted RBP11.79□□□□□ -0.52
SMG1-208ENST00000563448 KLRC3Q07444 240 aa11.79□□□□□ -0.52
SMG1-208ENST00000563448 ZNF543Q08ER8 600 aa11.79□□□□□ -0.52
SMG1-208ENST00000563448 PKN1Q16512 942 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms