RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 CTU1Q7Z7A3 348 aaKnown RBP10.14□□□□□ -0.79
UBR1-204ENST00000563239 STAG1Q8WVM7 1258 aa10.14□□□□□ -0.79
UBR1-204ENST00000563239 RUFY2Q8WXA3 655 aa10.14□□□□□ -0.79
UBR1-204ENST00000563239 ESYT1Q9BSJ8 1104 aa10.14□□□□□ -0.79
UBR1-204ENST00000563239 MCOLN1Q9GZU1 580 aa10.14□□□□□ -0.79
UBR1-204ENST00000563239 RPAP3Q9H6T3 665 aaPredicted RBP10.14□□□□□ -0.79
UBR1-204ENST00000563239 VCPKMTQ9H867 229 aa10.14□□□□□ -0.79
UBR1-204ENST00000563239 ARHGEF10LQ9HCE6 1279 aa10.14□□□□□ -0.79
UBR1-204ENST00000563239 TXNRD2Q9NNW7 524 aa10.14□□□□□ -0.79
UBR1-204ENST00000563239 RBPJLQ9UBG7 517 aa10.14□□□□□ -0.79
UBR1-204ENST00000563239 TAF6LQ9Y6J9 622 aa10.14□□□□□ -0.79
UBR1-204ENST00000563239 LAMA4Q16363 1823 aa10.14□□□□□ -0.79
UBR1-204ENST00000563239 RLFQ13129 1914 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 NEDD4P46934 1319 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 USP17L15C9J2P7 530 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 USP17L13C9JLJ4 530 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 USP17L11C9JVI0 530 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 USP17L18D6R9N7 530 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 USP17L22D6RA61 530 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 USP17L17D6RBQ6 530 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 USP17L19D6RCP7 530 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 USP17L20D6RJB6 530 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 ZNF213O14771 459 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 CNMDO75829 334 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 TSPY3P0CV98 308 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 TSPY8P0CW00 308 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 HERVK_113P62684 666 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 ATP2B2Q01814 1243 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 USP17L24Q0WX57 530 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 OTOP1Q7RTM1 612 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 SPICE1Q8N0Z3 855 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 MAP4K1Q92918 833 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 ERO1AQ96HE7 468 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 TRIM47Q96LD4 638 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 LSG1Q9H089 658 aaKnown RBP10.13□□□□□ -0.79
UBR1-204ENST00000563239 MORF4L1Q9UBU8 362 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 CLIP2Q9UDT6 1046 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 PNMA3Q9UL41 463 aa10.13□□□□□ -0.79
UBR1-204ENST00000563239 TNRC18O15417 2968 aaPredicted RBP10.13□□□□□ -0.79
UBR1-204ENST00000563239 CENPFP49454 3210 aa10.12□□□□□ -0.79
UBR1-204ENST00000563239 RANBP6O60518 1105 aaKnown RBP10.12□□□□□ -0.79
UBR1-204ENST00000563239 TTLL1O95922 423 aa10.12□□□□□ -0.79
UBR1-204ENST00000563239 CYP21A2P08686 494 aa10.12□□□□□ -0.79
UBR1-204ENST00000563239 PCP11498 1178 aaKnown RBP10.12□□□□□ -0.79
UBR1-204ENST00000563239 GCLCP48506 637 aaPredicted RBP10.12□□□□□ -0.79
UBR1-204ENST00000563239 IRX3P78415 501 aaPredicted RBP10.12□□□□□ -0.79
UBR1-204ENST00000563239 Q3C1V9 767 aa10.12□□□□□ -0.79
UBR1-204ENST00000563239 RCSD1Q6JBY9 416 aa10.12□□□□□ -0.79
UBR1-204ENST00000563239 LBX2Q6XYB7 198 aa10.12□□□□□ -0.79
UBR1-204ENST00000563239 MFSD6Q6ZSS7 791 aa10.12□□□□□ -0.79
UBR1-204ENST00000563239 LRRC47Q8N1G4 583 aaKnown RBP10.12□□□□□ -0.79
UBR1-204ENST00000563239 ANKRD13CQ8N6S4 541 aa10.12□□□□□ -0.79
UBR1-204ENST00000563239 SMCR8Q8TEV9 937 aaPredicted RBP10.12□□□□□ -0.79
UBR1-204ENST00000563239 LPAR1Q92633 364 aa10.12□□□□□ -0.79
UBR1-204ENST00000563239 SH2D4AQ9H788 454 aa10.12□□□□□ -0.79
UBR1-204ENST00000563239 TCP11L1Q9NUJ3 509 aa10.12□□□□□ -0.79
UBR1-204ENST00000563239 CTNNA3Q9UI47 895 aa10.12□□□□□ -0.79
UBR1-204ENST00000563239 TSPY2A6NKD2 308 aa10.11□□□□□ -0.79
UBR1-204ENST00000563239 SPDYE16A6NNV3 312 aaPredicted RBP10.11□□□□□ -0.79
UBR1-204ENST00000563239 F5H6K3 240 aa10.11□□□□□ -0.79
UBR1-204ENST00000563239 WDR46O15213 610 aaKnown RBP10.11□□□□□ -0.79
UBR1-204ENST00000563239 CDC45O75419 566 aa10.11□□□□□ -0.79
UBR1-204ENST00000563239 ECM2O94769 699 aaPredicted RBP10.11□□□□□ -0.79
UBR1-204ENST00000563239 NDUFB10O96000 172 aa10.11□□□□□ -0.79
UBR1-204ENST00000563239 PSMC4P43686 418 aa10.11□□□□□ -0.79
UBR1-204ENST00000563239 KLRC3Q07444 240 aa10.11□□□□□ -0.79
UBR1-204ENST00000563239 IMMTQ16891 758 aaKnown RBP10.11□□□□□ -0.79
UBR1-204ENST00000563239 FAM110CQ1W6H9 321 aa10.11□□□□□ -0.79
UBR1-204ENST00000563239 RRP12Q5JTH9 1297 aaKnown RBP10.11□□□□□ -0.79
UBR1-204ENST00000563239 GMCL1P1Q8NEA9 526 aa10.11□□□□□ -0.79
UBR1-204ENST00000563239 NUP88Q99567 741 aaPredicted RBP10.11□□□□□ -0.79
UBR1-204ENST00000563239 EFCC1Q9HA90 598 aa10.11□□□□□ -0.79
UBR1-204ENST00000563239 BTBD7Q9P203 1132 aa10.11□□□□□ -0.79
UBR1-204ENST00000563239 SYNPO2Q9UMS6 1093 aa10.11□□□□□ -0.79
UBR1-204ENST00000563239 PTPN22Q9Y2R2 807 aa10.11□□□□□ -0.79
UBR1-204ENST00000563239 TRIM17Q9Y577 477 aa10.11□□□□□ -0.79
UBR1-204ENST00000563239 KDM4AO75164 1064 aa10.1□□□□□ -0.79
UBR1-204ENST00000563239 DSG3P32926 999 aa10.1□□□□□ -0.79
UBR1-204ENST00000563239 COL9A3Q14050 684 aaPredicted RBP10.1□□□□□ -0.79
UBR1-204ENST00000563239 COG2Q14746 738 aa10.1□□□□□ -0.79
UBR1-204ENST00000563239 NECTIN1Q15223 517 aa10.1□□□□□ -0.79
UBR1-204ENST00000563239 PKN2Q16513 984 aaKnown RBP10.1□□□□□ -0.79
UBR1-204ENST00000563239 FAM83BQ5T0W9 1011 aa10.1□□□□□ -0.79
UBR1-204ENST00000563239 FBXO46Q6PJ61 603 aaPredicted RBP10.1□□□□□ -0.79
UBR1-204ENST00000563239 STOX1Q6ZVD7 989 aa10.1□□□□□ -0.79
UBR1-204ENST00000563239 RASGRP2Q7LDG7 609 aa10.1□□□□□ -0.79
UBR1-204ENST00000563239 ABHD8Q96I13 439 aa10.1□□□□□ -0.79
UBR1-204ENST00000563239 RNF41Q9H4P4 317 aaPredicted RBP10.1□□□□□ -0.79
UBR1-204ENST00000563239 GOPCQ9HD26 462 aa10.1□□□□□ -0.79
UBR1-204ENST00000563239 TOMM22Q9NS69 142 aa10.1□□□□□ -0.79
UBR1-204ENST00000563239 FBXO28Q9NVF7 368 aa10.1□□□□□ -0.79
UBR1-204ENST00000563239 ZSWIM5Q9P217 1185 aa10.1□□□□□ -0.79
UBR1-204ENST00000563239 ADAMTS5Q9UNA0 930 aa10.1□□□□□ -0.79
UBR1-204ENST00000563239 RABGAP1Q9Y3P9 1069 aa10.1□□□□□ -0.79
UBR1-204ENST00000563239 RBM8AQ9Y5S9 174 aaKnown RBP10.1□□□□□ -0.79
UBR1-204ENST00000563239 A0A0G2JMZ2 1700 aa10.1□□□□□ -0.79
UBR1-204ENST00000563239 PARP14Q460N5 1801 aa10.1□□□□□ -0.79
UBR1-204ENST00000563239 MYH4Q9Y623 1939 aa10.09□□□□□ -0.79
UBR1-204ENST00000563239 B4E1Z4 1266 aa10.09□□□□□ -0.79
UBR1-204ENST00000563239 RGS19P49795 217 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms