RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 RAD50Q92878 1312 aa22.21■■□□□ 1.15
CDH11-206ENST00000562998 NEFLP07196 543 aa22.2■■□□□ 1.14
CDH11-206ENST00000562998 PSMC4P43686 418 aa22.2■■□□□ 1.14
CDH11-206ENST00000562998 KIF22Q14807 665 aa22.2■■□□□ 1.14
CDH11-206ENST00000562998 LBX2Q6XYB7 198 aa22.2■■□□□ 1.14
CDH11-206ENST00000562998 MKL1Q969V6 931 aa22.2■■□□□ 1.14
CDH11-206ENST00000562998 RPAP3Q9H6T3 665 aaPredicted RBP22.2■■□□□ 1.14
CDH11-206ENST00000562998 MTMR4Q9NYA4 1195 aa22.2■■□□□ 1.14
CDH11-206ENST00000562998 RBPJLQ9UBG7 517 aa22.2■■□□□ 1.14
CDH11-206ENST00000562998 HPS5Q9UPZ3 1129 aa22.2■■□□□ 1.14
CDH11-206ENST00000562998 LAMA4Q16363 1823 aa22.2■■□□□ 1.14
CDH11-206ENST00000562998 ERICH6BQ5W0A0 696 aa22.19■■□□□ 1.14
CDH11-206ENST00000562998 CEP95Q96GE4 821 aa22.19■■□□□ 1.14
CDH11-206ENST00000562998 TXNRD2Q9NNW7 524 aa22.19■■□□□ 1.14
CDH11-206ENST00000562998 SYNPO2Q9UMS6 1093 aa22.19■■□□□ 1.14
CDH11-206ENST00000562998 NOVP48745 357 aa22.18■■□□□ 1.14
CDH11-206ENST00000562998 TFAP4Q01664 338 aa22.18■■□□□ 1.14
CDH11-206ENST00000562998 FAM47AQ5JRC9 791 aa22.18■■□□□ 1.14
CDH11-206ENST00000562998 GTF3C2Q8WUA4 911 aaPredicted RBP22.18■■□□□ 1.14
CDH11-206ENST00000562998 PARP14Q460N5 1801 aa22.17■■□□□ 1.14
CDH11-206ENST00000562998 PCP11498 1178 aaKnown RBP22.17■■□□□ 1.14
CDH11-206ENST00000562998 PRMT2P55345 433 aa22.17■■□□□ 1.14
CDH11-206ENST00000562998 BMP2KLQ5H9B9 411 aa22.17■■□□□ 1.14
CDH11-206ENST00000562998 STAG1Q8WVM7 1258 aa22.17■■□□□ 1.14
CDH11-206ENST00000562998 IL17RBQ9NRM6 502 aa22.17■■□□□ 1.14
CDH11-206ENST00000562998 MYH4Q9Y623 1939 aa22.16■■□□□ 1.14
CDH11-206ENST00000562998 SPDYE16A6NNV3 312 aaPredicted RBP22.16■■□□□ 1.14
CDH11-206ENST00000562998 WDR46O15213 610 aaKnown RBP22.16■■□□□ 1.14
CDH11-206ENST00000562998 SGSM2O43147 1006 aa22.16■■□□□ 1.14
CDH11-206ENST00000562998 CNMDO75829 334 aa22.16■■□□□ 1.14
CDH11-206ENST00000562998 TSPY3P0CV98 308 aa22.16■■□□□ 1.14
CDH11-206ENST00000562998 TSPY8P0CW00 308 aa22.16■■□□□ 1.14
CDH11-206ENST00000562998 FCGRTP55899 365 aa22.16■■□□□ 1.14
CDH11-206ENST00000562998 TBC1D10CQ8IV04 446 aa22.16■■□□□ 1.14
CDH11-206ENST00000562998 RUFY2Q8WXA3 655 aa22.16■■□□□ 1.14
CDH11-206ENST00000562998 SRRDQ9UH36 339 aa22.16■■□□□ 1.14
CDH11-206ENST00000562998 CENPFP49454 3210 aa22.16■■□□□ 1.14
CDH11-206ENST00000562998 A0A0G2JMZ2 1700 aa22.16■■□□□ 1.14
CDH11-206ENST00000562998 PEX10O60683 326 aa22.15■■□□□ 1.14
CDH11-206ENST00000562998 TTLL1O95922 423 aa22.15■■□□□ 1.14
CDH11-206ENST00000562998 HAND2P61296 217 aa22.15■■□□□ 1.14
CDH11-206ENST00000562998 COG2Q14746 738 aa22.15■■□□□ 1.14
CDH11-206ENST00000562998 AKNAD1Q5T1N1 836 aa22.15■■□□□ 1.14
CDH11-206ENST00000562998 SPICE1Q8N0Z3 855 aa22.15■■□□□ 1.14
CDH11-206ENST00000562998 NKX2-3Q8TAU0 364 aa22.15■■□□□ 1.14
CDH11-206ENST00000562998 GOPCQ9HD26 462 aa22.15■■□□□ 1.14
CDH11-206ENST00000562998 CLIP2Q9UDT6 1046 aa22.15■■□□□ 1.14
CDH11-206ENST00000562998 RABGAP1Q9Y3P9 1069 aa22.15■■□□□ 1.14
CDH11-206ENST00000562998 PTCH2Q9Y6C5 1203 aa22.15■■□□□ 1.14
CDH11-206ENST00000562998 DOCK3Q8IZD9 2030 aa22.14■■□□□ 1.14
CDH11-206ENST00000562998 MYPNQ86TC9 1320 aa22.14■■□□□ 1.14
CDH11-206ENST00000562998 F5H6K3 240 aa22.14■■□□□ 1.13
CDH11-206ENST00000562998 FMNL1O95466 1100 aaPredicted RBP22.14■■□□□ 1.13
CDH11-206ENST00000562998 ATP2B2Q01814 1243 aa22.14■■□□□ 1.13
CDH11-206ENST00000562998 KLRC3Q07444 240 aa22.14■■□□□ 1.13
CDH11-206ENST00000562998 Q3C1V9 767 aa22.14■■□□□ 1.13
CDH11-206ENST00000562998 GPRC5AQ8NFJ5 357 aa22.14■■□□□ 1.13
CDH11-206ENST00000562998 TSPY2A6NKD2 308 aa22.13■■□□□ 1.13
CDH11-206ENST00000562998 ZNF213O14771 459 aa22.13■■□□□ 1.13
CDH11-206ENST00000562998 HOXD10P28358 340 aa22.13■■□□□ 1.13
CDH11-206ENST00000562998 ERVK-9P63128 1117 aa22.13■■□□□ 1.13
CDH11-206ENST00000562998 ERVK-24P63145 666 aa22.13■■□□□ 1.13
CDH11-206ENST00000562998 GMCL1P1Q8NEA9 526 aa22.13■■□□□ 1.13
CDH11-206ENST00000562998 ARMC5Q96C12 935 aa22.13■■□□□ 1.13
CDH11-206ENST00000562998 TCP11L1Q9NUJ3 509 aa22.13■■□□□ 1.13
CDH11-206ENST00000562998 HOXC10Q9NYD6 342 aa22.13■■□□□ 1.13
CDH11-206ENST00000562998 BTBD7Q9P203 1132 aa22.13■■□□□ 1.13
CDH11-206ENST00000562998 ADAMTS5Q9UNA0 930 aa22.13■■□□□ 1.13
CDH11-206ENST00000562998 ECM2O94769 699 aaPredicted RBP22.12■■□□□ 1.13
CDH11-206ENST00000562998 DSG3P32926 999 aa22.12■■□□□ 1.13
CDH11-206ENST00000562998 NT5C2P49902 561 aa22.12■■□□□ 1.13
CDH11-206ENST00000562998 PTH1RQ03431 593 aa22.12■■□□□ 1.13
CDH11-206ENST00000562998 TANGO6Q9C0B7 1094 aa22.12■■□□□ 1.13
CDH11-206ENST00000562998 CTNNA3Q9UI47 895 aa22.12■■□□□ 1.13
CDH11-206ENST00000562998 GABRQQ9UN88 632 aa22.12■■□□□ 1.13
CDH11-206ENST00000562998 NEDD4P46934 1319 aa22.11■■□□□ 1.13
CDH11-206ENST00000562998 PLXNB2O15031 1838 aa22.11■■□□□ 1.13
CDH11-206ENST00000562998 TNPO2O14787 897 aaKnown RBP22.11■■□□□ 1.13
CDH11-206ENST00000562998 RANBP6O60518 1105 aaKnown RBP22.11■■□□□ 1.13
CDH11-206ENST00000562998 NMT2O60551 498 aa22.11■■□□□ 1.13
CDH11-206ENST00000562998 NDUFB10O96000 172 aa22.11■■□□□ 1.13
CDH11-206ENST00000562998 PRKCZQ05513 592 aa22.11■■□□□ 1.13
CDH11-206ENST00000562998 PPP4R3BQ5MIZ7 849 aa22.11■■□□□ 1.13
CDH11-206ENST00000562998 MFSD6Q6ZSS7 791 aa22.11■■□□□ 1.13
CDH11-206ENST00000562998 RNF41Q9H4P4 317 aaPredicted RBP22.11■■□□□ 1.13
CDH11-206ENST00000562998 PPP4R2Q9NY27 417 aa22.11■■□□□ 1.13
CDH11-206ENST00000562998 GJD2Q9UKL4 321 aa22.11■■□□□ 1.13
CDH11-206ENST00000562998 IRF5Q13568 498 aa22.1■■□□□ 1.13
CDH11-206ENST00000562998 IMMTQ16891 758 aaKnown RBP22.1■■□□□ 1.13
CDH11-206ENST00000562998 PAGR1Q9BTK6 254 aa22.1■■□□□ 1.13
CDH11-206ENST00000562998 PORCNQ9H237 461 aa22.1■■□□□ 1.13
CDH11-206ENST00000562998 CCDC85CA6NKD9 419 aa22.09■■□□□ 1.13
CDH11-206ENST00000562998 FLOT1O75955 427 aa22.09■■□□□ 1.13
CDH11-206ENST00000562998 FAM83BQ5T0W9 1011 aa22.09■■□□□ 1.13
CDH11-206ENST00000562998 LRRC47Q8N1G4 583 aaKnown RBP22.09■■□□□ 1.13
CDH11-206ENST00000562998 MB21D1Q8N884 522 aa22.09■■□□□ 1.13
CDH11-206ENST00000562998 MAP4K1Q92918 833 aa22.09■■□□□ 1.13
CDH11-206ENST00000562998 NUP88Q99567 741 aaPredicted RBP22.09■■□□□ 1.13
CDH11-206ENST00000562998 FBXO28Q9NVF7 368 aa22.09■■□□□ 1.13
CDH11-206ENST00000562998 CAPN15O75808 1086 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms