RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 CPA4Q9UI42 421 aa19.78■□□□□ 0.76
CLK3-207ENST00000562389 SYNPO2Q9UMS6 1093 aa19.78■□□□□ 0.76
CLK3-207ENST00000562389 PARP14Q460N5 1801 aa19.78■□□□□ 0.76
CLK3-207ENST00000562389 USP17L15C9J2P7 530 aa19.77■□□□□ 0.76
CLK3-207ENST00000562389 USP17L13C9JLJ4 530 aa19.77■□□□□ 0.76
CLK3-207ENST00000562389 USP17L11C9JVI0 530 aa19.77■□□□□ 0.76
CLK3-207ENST00000562389 USP17L18D6R9N7 530 aa19.77■□□□□ 0.76
CLK3-207ENST00000562389 USP17L22D6RA61 530 aa19.77■□□□□ 0.76
CLK3-207ENST00000562389 USP17L17D6RBQ6 530 aa19.77■□□□□ 0.76
CLK3-207ENST00000562389 USP17L19D6RCP7 530 aa19.77■□□□□ 0.76
CLK3-207ENST00000562389 USP17L20D6RJB6 530 aa19.77■□□□□ 0.76
CLK3-207ENST00000562389 BCRP11274 1271 aa19.77■□□□□ 0.76
CLK3-207ENST00000562389 USP17L24Q0WX57 530 aa19.77■□□□□ 0.76
CLK3-207ENST00000562389 KIAA1755Q5JYT7 1200 aa19.77■□□□□ 0.76
CLK3-207ENST00000562389 CATSPERGQ6ZRH7 1159 aa19.77■□□□□ 0.76
CLK3-207ENST00000562389 MKL1Q969V6 931 aa19.77■□□□□ 0.76
CLK3-207ENST00000562389 ERO1AQ96HE7 468 aa19.77■□□□□ 0.76
CLK3-207ENST00000562389 RPAP3Q9H6T3 665 aaPredicted RBP19.77■□□□□ 0.76
CLK3-207ENST00000562389 IL17RBQ9NRM6 502 aa19.77■□□□□ 0.76
CLK3-207ENST00000562389 TCP11L1Q9NUJ3 509 aa19.77■□□□□ 0.76
CLK3-207ENST00000562389 GCLCP48506 637 aaPredicted RBP19.76■□□□□ 0.75
CLK3-207ENST00000562389 NOVP48745 357 aa19.76■□□□□ 0.75
CLK3-207ENST00000562389 ESR2Q92731 530 aa19.76■□□□□ 0.75
CLK3-207ENST00000562389 CLIP2Q9UDT6 1046 aa19.76■□□□□ 0.75
CLK3-207ENST00000562389 RBM8AQ9Y5S9 174 aaKnown RBP19.76■□□□□ 0.75
CLK3-207ENST00000562389 RLFQ13129 1914 aa19.76■□□□□ 0.75
CLK3-207ENST00000562389 MGAMO43451 1857 aa19.75■□□□□ 0.75
CLK3-207ENST00000562389 WDR46O15213 610 aaKnown RBP19.75■□□□□ 0.75
CLK3-207ENST00000562389 CYP21A2P08686 494 aa19.75■□□□□ 0.75
CLK3-207ENST00000562389 GTF3C2Q8WUA4 911 aaPredicted RBP19.75■□□□□ 0.75
CLK3-207ENST00000562389 P2RX7Q99572 595 aaKnown RBP19.75■□□□□ 0.75
CLK3-207ENST00000562389 CNNM2Q9H8M5 875 aa19.75■□□□□ 0.75
CLK3-207ENST00000562389 ANO2Q9NQ90 1003 aa19.75■□□□□ 0.75
CLK3-207ENST00000562389 ZSWIM8A7E2V4 1837 aa19.74■□□□□ 0.75
CLK3-207ENST00000562389 A0A0G2JMZ2 1700 aa19.74■□□□□ 0.75
CLK3-207ENST00000562389 NMT2O60551 498 aa19.74■□□□□ 0.75
CLK3-207ENST00000562389 HERVK_113P62684 666 aa19.74■□□□□ 0.75
CLK3-207ENST00000562389 LACTBP83111 547 aaPredicted RBP19.74■□□□□ 0.75
CLK3-207ENST00000562389 FAM110CQ1W6H9 321 aa19.74■□□□□ 0.75
CLK3-207ENST00000562389 CTU1Q7Z7A3 348 aaKnown RBP19.74■□□□□ 0.75
CLK3-207ENST00000562389 SPICE1Q8N0Z3 855 aa19.74■□□□□ 0.75
CLK3-207ENST00000562389 NKX2-3Q8TAU0 364 aa19.74■□□□□ 0.75
CLK3-207ENST00000562389 CD99L2Q8TCZ2 262 aa19.74■□□□□ 0.75
CLK3-207ENST00000562389 KRT23Q9C075 422 aa19.74■□□□□ 0.75
CLK3-207ENST00000562389 LBX2Q6XYB7 198 aa19.73■□□□□ 0.75
CLK3-207ENST00000562389 LRRC47Q8N1G4 583 aaKnown RBP19.73■□□□□ 0.75
CLK3-207ENST00000562389 ANKRD13CQ8N6S4 541 aa19.73■□□□□ 0.75
CLK3-207ENST00000562389 GMCL1P1Q8NEA9 526 aa19.73■□□□□ 0.75
CLK3-207ENST00000562389 TANGO6Q9C0B7 1094 aa19.73■□□□□ 0.75
CLK3-207ENST00000562389 STX8Q9UNK0 236 aa19.73■□□□□ 0.75
CLK3-207ENST00000562389 B4E1Z4 1266 aa19.72■□□□□ 0.75
CLK3-207ENST00000562389 F5H6K3 240 aa19.72■□□□□ 0.75
CLK3-207ENST00000562389 KDM4AO75164 1064 aa19.72■□□□□ 0.75
CLK3-207ENST00000562389 NDUFB10O96000 172 aa19.72■□□□□ 0.75
CLK3-207ENST00000562389 KLRC3Q07444 240 aa19.72■□□□□ 0.75
CLK3-207ENST00000562389 KIF22Q14807 665 aa19.72■□□□□ 0.75
CLK3-207ENST00000562389 MORF4L1Q9UBU8 362 aa19.72■□□□□ 0.75
CLK3-207ENST00000562389 MYPNQ86TC9 1320 aa19.72■□□□□ 0.75
CLK3-207ENST00000562389 SPDYE16A6NNV3 312 aaPredicted RBP19.71■□□□□ 0.75
CLK3-207ENST00000562389 CAP1Q01518 475 aa19.71■□□□□ 0.75
CLK3-207ENST00000562389 COG2Q14746 738 aa19.71■□□□□ 0.75
CLK3-207ENST00000562389 ARHGEF6Q15052 776 aa19.71■□□□□ 0.75
CLK3-207ENST00000562389 NECTIN1Q15223 517 aa19.71■□□□□ 0.75
CLK3-207ENST00000562389 CCDC178Q5BJE1 867 aa19.71■□□□□ 0.75
CLK3-207ENST00000562389 IQCA1Q86XH1 822 aa19.71■□□□□ 0.75
CLK3-207ENST00000562389 TTC14Q96N46 770 aa19.71■□□□□ 0.75
CLK3-207ENST00000562389 E7EWF7 191 aa19.7■□□□□ 0.74
CLK3-207ENST00000562389 RAD21O60216 631 aa19.7■□□□□ 0.74
CLK3-207ENST00000562389 TRDNQ13061 729 aa19.7■□□□□ 0.74
CLK3-207ENST00000562389 FAM83BQ5T0W9 1011 aa19.7■□□□□ 0.74
CLK3-207ENST00000562389 POTEEQ6S8J3 1075 aa19.7■□□□□ 0.74
CLK3-207ENST00000562389 OTOP1Q7RTM1 612 aa19.7■□□□□ 0.74
CLK3-207ENST00000562389 ARHGAP39Q9C0H5 1083 aa19.7■□□□□ 0.74
CLK3-207ENST00000562389 HOXC10Q9NYD6 342 aa19.7■□□□□ 0.74
CLK3-207ENST00000562389 ZSWIM5Q9P217 1185 aa19.7■□□□□ 0.74
CLK3-207ENST00000562389 RBPJLQ9UBG7 517 aa19.7■□□□□ 0.74
CLK3-207ENST00000562389 TAF6LQ9Y6J9 622 aa19.7■□□□□ 0.74
CLK3-207ENST00000562389 SLC27A2O14975 620 aa19.69■□□□□ 0.74
CLK3-207ENST00000562389 FLOT1O75955 427 aa19.69■□□□□ 0.74
CLK3-207ENST00000562389 GNRH1P01148 92 aa19.69■□□□□ 0.74
CLK3-207ENST00000562389 TOP1P11387 765 aaKnown RBP19.69■□□□□ 0.74
CLK3-207ENST00000562389 CTGFP29279 349 aa19.69■□□□□ 0.74
CLK3-207ENST00000562389 DSG3P32926 999 aa19.69■□□□□ 0.74
CLK3-207ENST00000562389 PKN2Q16513 984 aaKnown RBP19.69■□□□□ 0.74
CLK3-207ENST00000562389 CREB3L3Q68CJ9 461 aa19.69■□□□□ 0.74
CLK3-207ENST00000562389 SLFN13Q68D06 897 aa19.69■□□□□ 0.74
CLK3-207ENST00000562389 RCSD1Q6JBY9 416 aa19.69■□□□□ 0.74
CLK3-207ENST00000562389 STOX1Q6ZVD7 989 aa19.69■□□□□ 0.74
CLK3-207ENST00000562389 DGKHQ86XP1 1220 aa19.69■□□□□ 0.74
CLK3-207ENST00000562389 TMEM47Q9BQJ4 181 aa19.69■□□□□ 0.74
CLK3-207ENST00000562389 EFCC1Q9HA90 598 aa19.69■□□□□ 0.74
CLK3-207ENST00000562389 TXNRD2Q9NNW7 524 aa19.69■□□□□ 0.74
CLK3-207ENST00000562389 RABGAP1Q9Y3P9 1069 aa19.69■□□□□ 0.74
CLK3-207ENST00000562389 TRIM17Q9Y577 477 aa19.69■□□□□ 0.74
CLK3-207ENST00000562389 COL11A1P12107 1806 aaPredicted RBP19.68■□□□□ 0.74
CLK3-207ENST00000562389 CNMDO75829 334 aa19.68■□□□□ 0.74
CLK3-207ENST00000562389 ERVK-9P63128 1117 aa19.68■□□□□ 0.74
CLK3-207ENST00000562389 ERVK-24P63145 666 aa19.68■□□□□ 0.74
CLK3-207ENST00000562389 GPRC5AQ8NFJ5 357 aa19.68■□□□□ 0.74
CLK3-207ENST00000562389 NCOA7Q8NI08 942 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms