RNA–Protein interactions for RNA: ENST00000561956.1

AC009054.2-201, humanhuman

TSL 3 BASIC

Gene AC009054.2, Length 374 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009054.2-201ENST00000561956 NTRK3Q16288 839 aa12.65□□□□□ -0.38
AC009054.2-201ENST00000561956 CPLX2Q6PUV4 134 aaKnown RBP12.65□□□□□ -0.38
AC009054.2-201ENST00000561956 KRT26Q7Z3Y9 468 aa12.65□□□□□ -0.38
AC009054.2-201ENST00000561956 SIAH1Q8IUQ4 282 aa12.65□□□□□ -0.38
AC009054.2-201ENST00000561956 MKL1Q969V6 931 aa12.65□□□□□ -0.38
AC009054.2-201ENST00000561956 GINM1Q9NU53 330 aa12.65□□□□□ -0.38
AC009054.2-201ENST00000561956 RBM28Q9NW13 759 aaKnown RBP12.65□□□□□ -0.38
AC009054.2-201ENST00000561956 ZNF112Q9UJU3 913 aa12.65□□□□□ -0.38
AC009054.2-201ENST00000561956 OTOFQ9HC10 1997 aa12.64□□□□□ -0.39
AC009054.2-201ENST00000561956 CTNND1O60716 968 aaKnown RBP12.64□□□□□ -0.39
AC009054.2-201ENST00000561956 DTNBO60941 627 aa12.64□□□□□ -0.39
AC009054.2-201ENST00000561956 CDKL5O76039 1030 aa12.64□□□□□ -0.39
AC009054.2-201ENST00000561956 EEF2P13639 858 aaKnown RBP12.64□□□□□ -0.39
AC009054.2-201ENST00000561956 VEGFAP15692 232 aaPredicted RBP12.64□□□□□ -0.39
AC009054.2-201ENST00000561956 IFNAR1P17181 557 aa12.64□□□□□ -0.39
AC009054.2-201ENST00000561956 KIF5BP33176 963 aa12.64□□□□□ -0.39
AC009054.2-201ENST00000561956 RAB3GAP1Q15042 981 aa12.64□□□□□ -0.39
AC009054.2-201ENST00000561956 TMTC3Q6ZXV5 915 aa12.64□□□□□ -0.39
AC009054.2-201ENST00000561956 USP48Q86UV5 1035 aa12.64□□□□□ -0.39
AC009054.2-201ENST00000561956 LRRC47Q8N1G4 583 aaKnown RBP12.64□□□□□ -0.39
AC009054.2-201ENST00000561956 CTCFLQ8NI51 663 aaPredicted RBP12.64□□□□□ -0.39
AC009054.2-201ENST00000561956 CHMP5Q9NZZ3 219 aa12.64□□□□□ -0.39
AC009054.2-201ENST00000561956 SYNPO2Q9UMS6 1093 aa12.64□□□□□ -0.39
AC009054.2-201ENST00000561956 STK36Q9NRP7 1315 aa12.63□□□□□ -0.39
AC009054.2-201ENST00000561956 ASNSP08243 561 aa12.63□□□□□ -0.39
AC009054.2-201ENST00000561956 POTEIP0CG38 1075 aa12.63□□□□□ -0.39
AC009054.2-201ENST00000561956 POTEJP0CG39 1038 aa12.63□□□□□ -0.39
AC009054.2-201ENST00000561956 SNHG28P0DPA3 235 aa12.63□□□□□ -0.39
AC009054.2-201ENST00000561956 INPP5BP32019 993 aa12.63□□□□□ -0.39
AC009054.2-201ENST00000561956 ATP2B2Q01814 1243 aa12.63□□□□□ -0.39
AC009054.2-201ENST00000561956 FUT2Q10981 343 aa12.63□□□□□ -0.39
AC009054.2-201ENST00000561956 NBR1Q14596 966 aa12.63□□□□□ -0.39
AC009054.2-201ENST00000561956 DLK2Q6UY11 383 aa12.63□□□□□ -0.39
AC009054.2-201ENST00000561956 CDCA5Q96FF9 252 aa12.63□□□□□ -0.39
AC009054.2-201ENST00000561956 RRAGCQ9HB90 399 aa12.63□□□□□ -0.39
AC009054.2-201ENST00000561956 MAD2L2Q9UI95 211 aa12.63□□□□□ -0.39
AC009054.2-201ENST00000561956 MYH6P13533 1939 aa12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 A0A1W2PRG0 241 aa12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 PALM3A6NDB9 673 aaPredicted RBP12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 PLEKHA8P1O95397 391 aa12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 PDHBP11177 359 aa12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 FDPSP14324 419 aaKnown RBP12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 GNAQP50148 359 aa12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 NOL9Q5SY16 702 aaKnown RBP12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 CDC37L1Q7L3B6 337 aa12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 RASGRP2Q7LDG7 609 aa12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 NBPF11Q86T75 865 aa12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 SCYL3Q8IZE3 742 aa12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 GMCL1P1Q8NEA9 526 aa12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 KLRG1Q96E93 195 aa12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 DDX11Q96FC9 970 aa12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 WRNIP1Q96S55 665 aa12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 GLIS2Q9BZE0 524 aaPredicted RBP12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 ARHGEF10LQ9HCE6 1279 aa12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 NMRK2Q9NPI5 230 aa12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 ORC3Q9UBD5 711 aaPredicted RBP12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 CLEC11AQ9Y240 323 aa12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 PHIPQ8WWQ0 1821 aa12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 CNTNAP5Q8WYK1 1306 aa12.62□□□□□ -0.39
AC009054.2-201ENST00000561956 USP17L5A8MUK1 530 aa12.61□□□□□ -0.39
AC009054.2-201ENST00000561956 PPFIA3O75145 1194 aa12.61□□□□□ -0.39
AC009054.2-201ENST00000561956 USP2O75604 605 aaPredicted RBP12.61□□□□□ -0.39
AC009054.2-201ENST00000561956 FMNL1O95466 1100 aaPredicted RBP12.61□□□□□ -0.39
AC009054.2-201ENST00000561956 PARP1P09874 1014 aaKnown RBP12.61□□□□□ -0.39
AC009054.2-201ENST00000561956 PDCP20941 246 aa12.61□□□□□ -0.39
AC009054.2-201ENST00000561956 SYT1P21579 422 aa12.61□□□□□ -0.39
AC009054.2-201ENST00000561956 NUCB2P80303 420 aa12.61□□□□□ -0.39
AC009054.2-201ENST00000561956 PKP1Q13835 747 aa12.61□□□□□ -0.39
AC009054.2-201ENST00000561956 ASPRV1Q53RT3 343 aa12.61□□□□□ -0.39
AC009054.2-201ENST00000561956 LDHDQ86WU2 507 aa12.61□□□□□ -0.39
AC009054.2-201ENST00000561956 STAG2Q8N3U4 1231 aa12.61□□□□□ -0.39
AC009054.2-201ENST00000561956 SRBD1Q8N5C6 995 aaKnown RBP12.61□□□□□ -0.39
AC009054.2-201ENST00000561956 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.61□□□□□ -0.39
AC009054.2-201ENST00000561956 ACER1Q8TDN7 264 aa12.61□□□□□ -0.39
AC009054.2-201ENST00000561956 DCAF4Q8WV16 495 aa12.61□□□□□ -0.39
AC009054.2-201ENST00000561956 PHKBQ93100 1093 aa12.61□□□□□ -0.39
AC009054.2-201ENST00000561956 SLC26A6Q9BXS9 759 aa12.61□□□□□ -0.39
AC009054.2-201ENST00000561956 FZD1Q9UP38 647 aa12.61□□□□□ -0.39
AC009054.2-201ENST00000561956 MTMR7Q9Y216 660 aa12.61□□□□□ -0.39
AC009054.2-201ENST00000561956 TMX2Q9Y320 296 aa12.61□□□□□ -0.39
AC009054.2-201ENST00000561956 KIF3AQ9Y496 699 aa12.61□□□□□ -0.39
AC009054.2-201ENST00000561956 NF2P35240 595 aa12.6□□□□□ -0.39
AC009054.2-201ENST00000561956 ECE1P42892 770 aa12.6□□□□□ -0.39
AC009054.2-201ENST00000561956 SSRP1Q08945 709 aaKnown RBP12.6□□□□□ -0.39
AC009054.2-201ENST00000561956 ZNF543Q08ER8 600 aa12.6□□□□□ -0.39
AC009054.2-201ENST00000561956 MAP1SQ66K74 1059 aaPredicted RBP12.6□□□□□ -0.39
AC009054.2-201ENST00000561956 SLFN13Q68D06 897 aa12.6□□□□□ -0.39
AC009054.2-201ENST00000561956 USP17L2Q6R6M4 530 aa12.6□□□□□ -0.39
AC009054.2-201ENST00000561956 CCDC84Q86UT8 332 aaPredicted RBP12.6□□□□□ -0.39
AC009054.2-201ENST00000561956 CMTR1Q8N1G2 835 aaKnown RBP12.6□□□□□ -0.39
AC009054.2-201ENST00000561956 FAM184AQ8NB25 1140 aa12.6□□□□□ -0.39
AC009054.2-201ENST00000561956 SPOCK2Q92563 424 aa12.6□□□□□ -0.39
AC009054.2-201ENST00000561956 ZKSCAN4Q969J2 545 aaPredicted RBP12.6□□□□□ -0.39
AC009054.2-201ENST00000561956 GMCL1Q96IK5 515 aa12.6□□□□□ -0.39
AC009054.2-201ENST00000561956 LZTS2Q9BRK4 669 aa12.6□□□□□ -0.39
AC009054.2-201ENST00000561956 RNF26Q9BY78 433 aaPredicted RBP12.6□□□□□ -0.39
AC009054.2-201ENST00000561956 SH2D4AQ9H788 454 aa12.6□□□□□ -0.39
AC009054.2-201ENST00000561956 BAZ2BQ9UIF8 2168 aaKnown RBP12.59□□□□□ -0.39
AC009054.2-201ENST00000561956 KLRF2D3W0D1 207 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms