RNA–Protein interactions for RNA: ENST00000561557.1

LINC00566-201, long intergenic non-protein coding RNA 566, humanhuman

TSL 1 (best) BASIC

Gene LINC00566, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00566-201ENST00000561557 MKNK2Q9HBH9 465 aa11.41□□□□□ -0.58
LINC00566-201ENST00000561557 CTNNA3Q9UI47 895 aa11.41□□□□□ -0.58
LINC00566-201ENST00000561557 SLC45A1Q9Y2W3 748 aa11.41□□□□□ -0.58
LINC00566-201ENST00000561557 ATAD5Q96QE3 1844 aa11.4□□□□□ -0.58
LINC00566-201ENST00000561557 USP17L10C9JJH3 530 aa11.4□□□□□ -0.58
LINC00566-201ENST00000561557 IGF2BP3O00425 579 aaKnown RBP eCLIP11.4□□□□□ -0.58
LINC00566-201ENST00000561557 PCP11498 1178 aaKnown RBP11.4□□□□□ -0.58
LINC00566-201ENST00000561557 USP14P54578 494 aa11.4□□□□□ -0.58
LINC00566-201ENST00000561557 BACE1P56817 501 aa11.4□□□□□ -0.58
LINC00566-201ENST00000561557 SPP2Q13103 211 aa11.4□□□□□ -0.58
LINC00566-201ENST00000561557 VPS53Q5VIR6 699 aa11.4□□□□□ -0.58
LINC00566-201ENST00000561557 PRDM10Q9NQV6 1147 aa11.4□□□□□ -0.58
LINC00566-201ENST00000561557 PHIPQ8WWQ0 1821 aa11.39□□□□□ -0.59
LINC00566-201ENST00000561557 TRIM75PA6NK02 468 aa11.39□□□□□ -0.59
LINC00566-201ENST00000561557 BTBD19C9JJ37 291 aa11.39□□□□□ -0.59
LINC00566-201ENST00000561557 SGSM2O43147 1006 aa11.39□□□□□ -0.59
LINC00566-201ENST00000561557 FGRP09769 529 aa11.39□□□□□ -0.59
LINC00566-201ENST00000561557 HSPA8P11142 646 aaKnown RBP11.39□□□□□ -0.59
LINC00566-201ENST00000561557 JAG1P78504 1218 aa11.39□□□□□ -0.59
LINC00566-201ENST00000561557 PABPC4Q13310 644 aaKnown RBP eCLIP11.39□□□□□ -0.59
LINC00566-201ENST00000561557 MOGSQ13724 837 aa11.39□□□□□ -0.59
LINC00566-201ENST00000561557 RAB3GAP1Q15042 981 aa11.39□□□□□ -0.59
LINC00566-201ENST00000561557 PPP4R3BQ5MIZ7 849 aa11.39□□□□□ -0.59
LINC00566-201ENST00000561557 IFFO2Q5TF58 517 aa11.39□□□□□ -0.59
LINC00566-201ENST00000561557 USP17L2Q6R6M4 530 aa11.39□□□□□ -0.59
LINC00566-201ENST00000561557 CASC1Q6TDU7 716 aa11.39□□□□□ -0.59
LINC00566-201ENST00000561557 SLC44A5Q8NCS7 719 aa11.39□□□□□ -0.59
LINC00566-201ENST00000561557 KANSL2Q9H9L4 492 aa11.39□□□□□ -0.59
LINC00566-201ENST00000561557 ZFYVE28Q9HCC9 887 aa11.39□□□□□ -0.59
LINC00566-201ENST00000561557 TMOD4Q9NZQ9 345 aa11.39□□□□□ -0.59
LINC00566-201ENST00000561557 MPHOSPH10O00566 681 aaKnown RBP11.38□□□□□ -0.59
LINC00566-201ENST00000561557 ZNF213O14771 459 aa11.38□□□□□ -0.59
LINC00566-201ENST00000561557 AKR1B1P15121 316 aa11.38□□□□□ -0.59
LINC00566-201ENST00000561557 RASA1P20936 1047 aa11.38□□□□□ -0.59
LINC00566-201ENST00000561557 GUCY1A2P33402 732 aa11.38□□□□□ -0.59
LINC00566-201ENST00000561557 SEPT2Q15019 361 aa11.38□□□□□ -0.59
LINC00566-201ENST00000561557 FAM43AQ8N2R8 423 aa11.38□□□□□ -0.59
LINC00566-201ENST00000561557 C12orf42Q96LP6 360 aa11.38□□□□□ -0.59
LINC00566-201ENST00000561557 KIAA1683Q9H0B3 1180 aa11.38□□□□□ -0.59
LINC00566-201ENST00000561557 RNF41Q9H4P4 317 aaPredicted RBP11.38□□□□□ -0.59
LINC00566-201ENST00000561557 SH2D4AQ9H788 454 aa11.38□□□□□ -0.59
LINC00566-201ENST00000561557 ARHGEF10LQ9HCE6 1279 aa11.38□□□□□ -0.59
LINC00566-201ENST00000561557 AGTPBP1Q9UPW5 1226 aa11.38□□□□□ -0.59
LINC00566-201ENST00000561557 MYH8P13535 1937 aa11.38□□□□□ -0.59
LINC00566-201ENST00000561557 SMIM22K7EJ46 135 aa11.37□□□□□ -0.59
LINC00566-201ENST00000561557 PDHXO00330 501 aa11.37□□□□□ -0.59
LINC00566-201ENST00000561557 ORC4O43929 436 aa11.37□□□□□ -0.59
LINC00566-201ENST00000561557 HOXA7P31268 230 aaPredicted RBP11.37□□□□□ -0.59
LINC00566-201ENST00000561557 TAF1CQ15572 869 aaPredicted RBP11.37□□□□□ -0.59
LINC00566-201ENST00000561557 IMMTQ16891 758 aaKnown RBP11.37□□□□□ -0.59
LINC00566-201ENST00000561557 GPAT2Q6NUI2 795 aa11.37□□□□□ -0.59
LINC00566-201ENST00000561557 GADL1Q6ZQY3 521 aa11.37□□□□□ -0.59
LINC00566-201ENST00000561557 KIAA1211Q6ZU35 1233 aa11.37□□□□□ -0.59
LINC00566-201ENST00000561557 CCDC84Q86UT8 332 aaPredicted RBP11.37□□□□□ -0.59
LINC00566-201ENST00000561557 NEDD1Q8NHV4 660 aa11.37□□□□□ -0.59
LINC00566-201ENST00000561557 NYAP2Q9P242 653 aa11.37□□□□□ -0.59
LINC00566-201ENST00000561557 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.37□□□□□ -0.59
LINC00566-201ENST00000561557 PNMA3Q9UL41 463 aa11.37□□□□□ -0.59
LINC00566-201ENST00000561557 SYNPO2Q9UMS6 1093 aa11.37□□□□□ -0.59
LINC00566-201ENST00000561557 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.37□□□□□ -0.59
LINC00566-201ENST00000561557 PCDHGA4Q9Y5G9 962 aa11.37□□□□□ -0.59
LINC00566-201ENST00000561557 GPR25O00155 361 aa11.36□□□□□ -0.59
LINC00566-201ENST00000561557 TLR2O60603 784 aa11.36□□□□□ -0.59
LINC00566-201ENST00000561557 CDC45O75419 566 aa11.36□□□□□ -0.59
LINC00566-201ENST00000561557 TBC1D8O95759 1140 aa11.36□□□□□ -0.59
LINC00566-201ENST00000561557 OSBPP22059 807 aa11.36□□□□□ -0.59
LINC00566-201ENST00000561557 LBX1P52954 281 aa11.36□□□□□ -0.59
LINC00566-201ENST00000561557 HMGCS2P54868 508 aa11.36□□□□□ -0.59
LINC00566-201ENST00000561557 ICA1Q05084 483 aa11.36□□□□□ -0.59
LINC00566-201ENST00000561557 CTDSPL2Q05D32 466 aa11.36□□□□□ -0.59
LINC00566-201ENST00000561557 MTMR2Q13614 643 aa11.36□□□□□ -0.59
LINC00566-201ENST00000561557 SHROOM1Q2M3G4 852 aaPredicted RBP11.36□□□□□ -0.59
LINC00566-201ENST00000561557 AKNAD1Q5T1N1 836 aa11.36□□□□□ -0.59
LINC00566-201ENST00000561557 DMRTA1Q5VZB9 504 aa11.36□□□□□ -0.59
LINC00566-201ENST00000561557 MFSD6Q6ZSS7 791 aa11.36□□□□□ -0.59
LINC00566-201ENST00000561557 SKAP1Q86WV1 359 aa11.36□□□□□ -0.59
LINC00566-201ENST00000561557 STAG1Q8WVM7 1258 aa11.36□□□□□ -0.59
LINC00566-201ENST00000561557 PARK7Q99497 189 aaKnown RBP11.36□□□□□ -0.59
LINC00566-201ENST00000561557 FEZ1Q99689 392 aa11.36□□□□□ -0.59
LINC00566-201ENST00000561557 ESYT1Q9BSJ8 1104 aa11.36□□□□□ -0.59
LINC00566-201ENST00000561557 TMX2Q9Y320 296 aa11.36□□□□□ -0.59
LINC00566-201ENST00000561557 PTPRFP10586 1907 aa11.36□□□□□ -0.59
LINC00566-201ENST00000561557 PLIN4Q96Q06 1357 aa11.36□□□□□ -0.59
LINC00566-201ENST00000561557 IGKV6D-41A0A0C4DH26 115 aa11.35□□□□□ -0.59
LINC00566-201ENST00000561557 PRDM1O75626 825 aa11.35□□□□□ -0.59
LINC00566-201ENST00000561557 TSPY3P0CV98 308 aa11.35□□□□□ -0.59
LINC00566-201ENST00000561557 TSPY8P0CW00 308 aa11.35□□□□□ -0.59
LINC00566-201ENST00000561557 PTPN5P54829 565 aa11.35□□□□□ -0.59
LINC00566-201ENST00000561557 TFAP4Q01664 338 aa11.35□□□□□ -0.59
LINC00566-201ENST00000561557 CRHR2Q13324 411 aa11.35□□□□□ -0.59
LINC00566-201ENST00000561557 Q6ZNB5 142 aa11.35□□□□□ -0.59
LINC00566-201ENST00000561557 SIAH1Q8IUQ4 282 aa11.35□□□□□ -0.59
LINC00566-201ENST00000561557 STK11IPQ8N1F8 1099 aa11.35□□□□□ -0.59
LINC00566-201ENST00000561557 ACER1Q8TDN7 264 aa11.35□□□□□ -0.59
LINC00566-201ENST00000561557 GTF3C2Q8WUA4 911 aaPredicted RBP11.35□□□□□ -0.59
LINC00566-201ENST00000561557 LPAR1Q92633 364 aa11.35□□□□□ -0.59
LINC00566-201ENST00000561557 MAP4K1Q92918 833 aa11.35□□□□□ -0.59
LINC00566-201ENST00000561557 MKL1Q969V6 931 aa11.35□□□□□ -0.59
LINC00566-201ENST00000561557 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.35□□□□□ -0.59
LINC00566-201ENST00000561557 IL25Q9H293 177 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms