RNA–Protein interactions for RNA: ENST00000561449.1

TCF12-226, Transcript of transcription factor 12, humanhuman

TSL 1 (best)

Gene TCF12, Length 914 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-226ENST00000561449 RAB3GAP1Q15042 981 aa9.34□□□□□ -0.91
TCF12-226ENST00000561449 IMMTQ16891 758 aaKnown RBP9.34□□□□□ -0.91
TCF12-226ENST00000561449 NOM1Q5C9Z4 860 aaKnown RBP9.34□□□□□ -0.91
TCF12-226ENST00000561449 AKNAD1Q5T1N1 836 aa9.34□□□□□ -0.91
TCF12-226ENST00000561449 ANKRD23Q86SG2 305 aa9.34□□□□□ -0.91
TCF12-226ENST00000561449 NEDD1Q8NHV4 660 aa9.34□□□□□ -0.91
TCF12-226ENST00000561449 STAG1Q8WVM7 1258 aa9.34□□□□□ -0.91
TCF12-226ENST00000561449 MAP4K1Q92918 833 aa9.34□□□□□ -0.91
TCF12-226ENST00000561449 PTPN18Q99952 460 aa9.34□□□□□ -0.91
TCF12-226ENST00000561449 KIAA1683Q9H0B3 1180 aa9.34□□□□□ -0.91
TCF12-226ENST00000561449 SH2D4AQ9H788 454 aa9.34□□□□□ -0.91
TCF12-226ENST00000561449 ARHGEF10LQ9HCE6 1279 aa9.34□□□□□ -0.91
TCF12-226ENST00000561449 RNF186Q9NXI6 227 aa9.34□□□□□ -0.91
TCF12-226ENST00000561449 SYNPO2Q9UMS6 1093 aa9.34□□□□□ -0.91
TCF12-226ENST00000561449 PLIN4Q96Q06 1357 aa9.34□□□□□ -0.91
TCF12-226ENST00000561449 GREB1LQ9C091 1923 aaPredicted RBP9.33□□□□□ -0.92
TCF12-226ENST00000561449 BTBD19C9JJ37 291 aa9.33□□□□□ -0.92
TCF12-226ENST00000561449 TRPA1O75762 1119 aa9.33□□□□□ -0.92
TCF12-226ENST00000561449 CTCFP49711 727 aaPredicted RBP9.33□□□□□ -0.92
TCF12-226ENST00000561449 ICA1Q05084 483 aa9.33□□□□□ -0.92
TCF12-226ENST00000561449 CTDSPL2Q05D32 466 aa9.33□□□□□ -0.92
TCF12-226ENST00000561449 PABPC4Q13310 644 aaKnown RBP eCLIP9.33□□□□□ -0.92
TCF12-226ENST00000561449 SHROOM1Q2M3G4 852 aaPredicted RBP9.33□□□□□ -0.92
TCF12-226ENST00000561449 USP17L2Q6R6M4 530 aa9.33□□□□□ -0.92
TCF12-226ENST00000561449 MFSD6Q6ZSS7 791 aa9.33□□□□□ -0.92
TCF12-226ENST00000561449 CCDC84Q86UT8 332 aaPredicted RBP9.33□□□□□ -0.92
TCF12-226ENST00000561449 C12orf42Q96LP6 360 aa9.33□□□□□ -0.92
TCF12-226ENST00000561449 FEZ1Q99689 392 aa9.33□□□□□ -0.92
TCF12-226ENST00000561449 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.33□□□□□ -0.92
TCF12-226ENST00000561449 TMOD4Q9NZQ9 345 aa9.33□□□□□ -0.92
TCF12-226ENST00000561449 NYAP2Q9P242 653 aa9.33□□□□□ -0.92
TCF12-226ENST00000561449 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.33□□□□□ -0.92
TCF12-226ENST00000561449 AGTPBP1Q9UPW5 1226 aa9.33□□□□□ -0.92
TCF12-226ENST00000561449 LAMA4Q16363 1823 aa9.33□□□□□ -0.92
TCF12-226ENST00000561449 IGKV6D-41A0A0C4DH26 115 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 TSPY2A6NKD2 308 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 EPB41L2O43491 1005 aaKnown RBP9.32□□□□□ -0.92
TCF12-226ENST00000561449 PRDM1O75626 825 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 TSPY3P0CV98 308 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 TSPY8P0CW00 308 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 HOXA7P31268 230 aaPredicted RBP9.32□□□□□ -0.92
TCF12-226ENST00000561449 HMGCS2P54868 508 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 HAND2P61296 217 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 TFAP4Q01664 338 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 PTH1RQ03431 593 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 MTMR2Q13614 643 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 GPAT2Q6NUI2 795 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 STK11IPQ8N1F8 1099 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 FAM43AQ8N2R8 423 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 LPAR1Q92633 364 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 ESR2Q92731 530 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 MKL1Q969V6 931 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 LSG1Q9H089 658 aaKnown RBP9.32□□□□□ -0.92
TCF12-226ENST00000561449 NBPF3Q9H094 633 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 CNNM2Q9H8M5 875 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 ZFYVE28Q9HCC9 887 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 EMILIN3Q9NT22 766 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 TCP11L1Q9NUJ3 509 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 PNMA3Q9UL41 463 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 TMX2Q9Y320 296 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 LOC285556D6RIA3 1793 aa9.32□□□□□ -0.92
TCF12-226ENST00000561449 A0A1W2PRG0 241 aa9.31□□□□□ -0.92
TCF12-226ENST00000561449 PDHXO00330 501 aa9.31□□□□□ -0.92
TCF12-226ENST00000561449 FOXN1O15353 648 aa9.31□□□□□ -0.92
TCF12-226ENST00000561449 RANBP6O60518 1105 aaKnown RBP9.31□□□□□ -0.92
TCF12-226ENST00000561449 EIF5BO60841 1220 aaKnown RBP9.31□□□□□ -0.92
TCF12-226ENST00000561449 REC8O95072 547 aa9.31□□□□□ -0.92
TCF12-226ENST00000561449 TTLL1O95922 423 aa9.31□□□□□ -0.92
TCF12-226ENST00000561449 EEF2P13639 858 aaKnown RBP9.31□□□□□ -0.92
TCF12-226ENST00000561449 NOVP48745 357 aa9.31□□□□□ -0.92
TCF12-226ENST00000561449 TAF1CQ15572 869 aaPredicted RBP9.31□□□□□ -0.92
TCF12-226ENST00000561449 CCDC178Q5BJE1 867 aa9.31□□□□□ -0.92
TCF12-226ENST00000561449 GADL1Q6ZQY3 521 aa9.31□□□□□ -0.92
TCF12-226ENST00000561449 SIAH1Q8IUQ4 282 aa9.31□□□□□ -0.92
TCF12-226ENST00000561449 TBC1D10CQ8IV04 446 aa9.31□□□□□ -0.92
TCF12-226ENST00000561449 ACER1Q8TDN7 264 aa9.31□□□□□ -0.92
TCF12-226ENST00000561449 PARK7Q99497 189 aaKnown RBP9.31□□□□□ -0.92
TCF12-226ENST00000561449 KRT23Q9C075 422 aa9.31□□□□□ -0.92
TCF12-226ENST00000561449 VCPKMTQ9H867 229 aa9.31□□□□□ -0.92
TCF12-226ENST00000561449 ANO2Q9NQ90 1003 aa9.31□□□□□ -0.92
TCF12-226ENST00000561449 TOMM22Q9NS69 142 aa9.31□□□□□ -0.92
TCF12-226ENST00000561449 MTMR4Q9NYA4 1195 aa9.31□□□□□ -0.92
TCF12-226ENST00000561449 RBM8AQ9Y5S9 174 aaKnown RBP9.31□□□□□ -0.92
TCF12-226ENST00000561449 TLR2O60603 784 aa9.3□□□□□ -0.92
TCF12-226ENST00000561449 TBC1D8O95759 1140 aa9.3□□□□□ -0.92
TCF12-226ENST00000561449 CYP21A2P08686 494 aa9.3□□□□□ -0.92
TCF12-226ENST00000561449 HSPA8P11142 646 aaKnown RBP9.3□□□□□ -0.92
TCF12-226ENST00000561449 TRDNQ13061 729 aa9.3□□□□□ -0.92
TCF12-226ENST00000561449 CRHR2Q13324 411 aa9.3□□□□□ -0.92
TCF12-226ENST00000561449 NECTIN1Q15223 517 aa9.3□□□□□ -0.92
TCF12-226ENST00000561449 FAM47AQ5JRC9 791 aa9.3□□□□□ -0.92
TCF12-226ENST00000561449 RRP12Q5JTH9 1297 aaKnown RBP9.3□□□□□ -0.92
TCF12-226ENST00000561449 VARS2Q5ST30 1063 aaKnown RBP9.3□□□□□ -0.92
TCF12-226ENST00000561449 RNF20Q5VTR2 975 aa9.3□□□□□ -0.92
TCF12-226ENST00000561449 IQCA1Q86XH1 822 aa9.3□□□□□ -0.92
TCF12-226ENST00000561449 CEP95Q96GE4 821 aa9.3□□□□□ -0.92
TCF12-226ENST00000561449 TTC14Q96N46 770 aa9.3□□□□□ -0.92
TCF12-226ENST00000561449 GOPCQ9HD26 462 aa9.3□□□□□ -0.92
TCF12-226ENST00000561449 INCENPQ9NQS7 918 aa9.3□□□□□ -0.92
TCF12-226ENST00000561449 PRDM10Q9NQV6 1147 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms