RNA–Protein interactions for RNA: ENST00000561217.1

TNFAIP2-211, Transcript of TNF alpha induced protein 2, humanhuman

TSL 3

Gene TNFAIP2, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-211ENST00000561217 FAM205CA6NFA0 338 aa12.65□□□□□ -0.38
TNFAIP2-211ENST00000561217 GLRX3O76003 335 aaKnown RBP12.65□□□□□ -0.38
TNFAIP2-211ENST00000561217 BAG3O95817 575 aa12.65□□□□□ -0.38
TNFAIP2-211ENST00000561217 GH2P01242 217 aa12.65□□□□□ -0.38
TNFAIP2-211ENST00000561217 IGHA2P01877 340 aa12.65□□□□□ -0.38
TNFAIP2-211ENST00000561217 CYBAP13498 195 aa12.65□□□□□ -0.38
TNFAIP2-211ENST00000561217 PTPREP23469 700 aa12.65□□□□□ -0.38
TNFAIP2-211ENST00000561217 PPP4CP60510 307 aa12.65□□□□□ -0.38
TNFAIP2-211ENST00000561217 CCNA1P78396 465 aa12.65□□□□□ -0.38
TNFAIP2-211ENST00000561217 GJC2Q5T442 439 aaPredicted RBP12.65□□□□□ -0.38
TNFAIP2-211ENST00000561217 API5Q9BZZ5 524 aaKnown RBP12.65□□□□□ -0.38
TNFAIP2-211ENST00000561217 BTBD7Q9P203 1132 aa12.65□□□□□ -0.38
TNFAIP2-211ENST00000561217 SAP30BPQ9UHR5 308 aaKnown RBP12.65□□□□□ -0.38
TNFAIP2-211ENST00000561217 USP17L15C9J2P7 530 aa12.64□□□□□ -0.39
TNFAIP2-211ENST00000561217 USP17L13C9JLJ4 530 aa12.64□□□□□ -0.39
TNFAIP2-211ENST00000561217 USP17L11C9JVI0 530 aa12.64□□□□□ -0.39
TNFAIP2-211ENST00000561217 USP17L18D6R9N7 530 aa12.64□□□□□ -0.39
TNFAIP2-211ENST00000561217 USP17L22D6RA61 530 aa12.64□□□□□ -0.39
TNFAIP2-211ENST00000561217 USP17L17D6RBQ6 530 aa12.64□□□□□ -0.39
TNFAIP2-211ENST00000561217 USP17L19D6RCP7 530 aa12.64□□□□□ -0.39
TNFAIP2-211ENST00000561217 USP17L20D6RJB6 530 aa12.64□□□□□ -0.39
TNFAIP2-211ENST00000561217 HLA-DOAP06340 250 aa12.64□□□□□ -0.39
TNFAIP2-211ENST00000561217 VCAM1P19320 739 aa12.64□□□□□ -0.39
TNFAIP2-211ENST00000561217 ATP2B2Q01814 1243 aa12.64□□□□□ -0.39
TNFAIP2-211ENST00000561217 USP17L24Q0WX57 530 aa12.64□□□□□ -0.39
TNFAIP2-211ENST00000561217 LBX2Q6XYB7 198 aa12.64□□□□□ -0.39
TNFAIP2-211ENST00000561217 SLC39A5Q6ZMH5 540 aa12.64□□□□□ -0.39
TNFAIP2-211ENST00000561217 SPNS2Q8IVW8 549 aa12.64□□□□□ -0.39
TNFAIP2-211ENST00000561217 CDCA7LQ96GN5 454 aa12.64□□□□□ -0.39
TNFAIP2-211ENST00000561217 HS3ST6Q96QI5 342 aa12.64□□□□□ -0.39
TNFAIP2-211ENST00000561217 FEZ1Q99689 392 aa12.64□□□□□ -0.39
TNFAIP2-211ENST00000561217 PRDM5Q9NQX1 630 aaPredicted RBP12.64□□□□□ -0.39
TNFAIP2-211ENST00000561217 SNRKQ9NRH2 765 aa12.64□□□□□ -0.39
TNFAIP2-211ENST00000561217 UQCRFS1P1P0C7P4 283 aa12.63□□□□□ -0.39
TNFAIP2-211ENST00000561217 HOXB3P14651 431 aaPredicted RBP12.63□□□□□ -0.39
TNFAIP2-211ENST00000561217 SMAD3P84022 425 aaKnown RBP12.63□□□□□ -0.39
TNFAIP2-211ENST00000561217 SNX17Q15036 470 aa12.63□□□□□ -0.39
TNFAIP2-211ENST00000561217 TRIM60Q495X7 471 aa12.63□□□□□ -0.39
TNFAIP2-211ENST00000561217 CATSPERGQ6ZRH7 1159 aa12.63□□□□□ -0.39
TNFAIP2-211ENST00000561217 ZNF710Q8N1W2 664 aa12.63□□□□□ -0.39
TNFAIP2-211ENST00000561217 BADQ92934 168 aa12.63□□□□□ -0.39
TNFAIP2-211ENST00000561217 PDLIM7Q9NR12 457 aa12.63□□□□□ -0.39
TNFAIP2-211ENST00000561217 IVNS1ABPQ9Y6Y0 642 aa12.63□□□□□ -0.39
TNFAIP2-211ENST00000561217 A0A0G2JMZ2 1700 aa12.62□□□□□ -0.39
TNFAIP2-211ENST00000561217 TRIM43BA6NCK2 446 aa12.62□□□□□ -0.39
TNFAIP2-211ENST00000561217 SPDYE16A6NNV3 312 aaPredicted RBP12.62□□□□□ -0.39
TNFAIP2-211ENST00000561217 KBTBD13C9JR72 458 aa12.62□□□□□ -0.39
TNFAIP2-211ENST00000561217 CYP2E1P05181 493 aaPredicted RBP12.62□□□□□ -0.39
TNFAIP2-211ENST00000561217 GNAI3P08754 354 aa12.62□□□□□ -0.39
TNFAIP2-211ENST00000561217 FOSL2P15408 326 aa12.62□□□□□ -0.39
TNFAIP2-211ENST00000561217 DYNLL1P63167 89 aaKnown RBP12.62□□□□□ -0.39
TNFAIP2-211ENST00000561217 ANO1Q5XXA6 986 aa12.62□□□□□ -0.39
TNFAIP2-211ENST00000561217 TATDN1Q6P1N9 297 aa12.62□□□□□ -0.39
TNFAIP2-211ENST00000561217 SH3RF1Q7Z6J0 888 aa12.62□□□□□ -0.39
TNFAIP2-211ENST00000561217 ACER1Q8TDN7 264 aa12.62□□□□□ -0.39
TNFAIP2-211ENST00000561217 TRIM43Q96BQ3 446 aaPredicted RBP12.62□□□□□ -0.39
TNFAIP2-211ENST00000561217 KIAA1683Q9H0B3 1180 aa12.62□□□□□ -0.39
TNFAIP2-211ENST00000561217 PNMA6EA0A0J9YXQ4 647 aa12.61□□□□□ -0.39
TNFAIP2-211ENST00000561217 USP14P54578 494 aa12.61□□□□□ -0.39
TNFAIP2-211ENST00000561217 RAB3GAP1Q15042 981 aa12.61□□□□□ -0.39
TNFAIP2-211ENST00000561217 TTC39AQ5SRH9 613 aa12.61□□□□□ -0.39
TNFAIP2-211ENST00000561217 OLFML2BQ68BL8 750 aa12.61□□□□□ -0.39
TNFAIP2-211ENST00000561217 ATF7IPQ6VMQ6 1270 aa12.61□□□□□ -0.39
TNFAIP2-211ENST00000561217 ARRDC4Q8NCT1 418 aa12.61□□□□□ -0.39
TNFAIP2-211ENST00000561217 RPAP3Q9H6T3 665 aaPredicted RBP12.61□□□□□ -0.39
TNFAIP2-211ENST00000561217 POTEB3A0JP26 581 aa12.6□□□□□ -0.39
TNFAIP2-211ENST00000561217 SEPT4O43236 478 aa12.6□□□□□ -0.39
TNFAIP2-211ENST00000561217 ADORA2AP29274 412 aa12.6□□□□□ -0.39
TNFAIP2-211ENST00000561217 G3BP1Q13283 466 aaKnown RBP eCLIP12.6□□□□□ -0.39
TNFAIP2-211ENST00000561217 POTEBQ6S5H4 581 aa12.6□□□□□ -0.39
TNFAIP2-211ENST00000561217 DPP9Q86TI2 863 aa12.6□□□□□ -0.39
TNFAIP2-211ENST00000561217 TRMT2AQ8IZ69 625 aaKnown RBP12.6□□□□□ -0.39
TNFAIP2-211ENST00000561217 DBNDD2Q9BQY9 259 aa12.6□□□□□ -0.39
TNFAIP2-211ENST00000561217 MOV10L1Q9BXT6 1211 aaKnown RBP12.6□□□□□ -0.39
TNFAIP2-211ENST00000561217 PIH1D3Q9NQM4 214 aaKnown RBP12.6□□□□□ -0.39
TNFAIP2-211ENST00000561217 SMCHD1A6NHR9 2005 aa12.59□□□□□ -0.39
TNFAIP2-211ENST00000561217 TMEM265A0A087WTH1 108 aa12.59□□□□□ -0.39
TNFAIP2-211ENST00000561217 CT47B1P0C2W7 299 aaPredicted RBP12.59□□□□□ -0.39
TNFAIP2-211ENST00000561217 ITGB8P26012 769 aa12.59□□□□□ -0.39
TNFAIP2-211ENST00000561217 ADCYAP1R1P41586 468 aa12.59□□□□□ -0.39
TNFAIP2-211ENST00000561217 ZAP70P43403 619 aa12.59□□□□□ -0.39
TNFAIP2-211ENST00000561217 MMRN1Q13201 1228 aa12.59□□□□□ -0.39
TNFAIP2-211ENST00000561217 LRRC41Q15345 812 aa12.59□□□□□ -0.39
TNFAIP2-211ENST00000561217 ABCB5Q2M3G0 1257 aa12.59□□□□□ -0.39
TNFAIP2-211ENST00000561217 TNNI3KQ59H18 835 aa12.59□□□□□ -0.39
TNFAIP2-211ENST00000561217 FAM47AQ5JRC9 791 aa12.59□□□□□ -0.39
TNFAIP2-211ENST00000561217 C1orf53Q5VUE5 145 aa12.59□□□□□ -0.39
TNFAIP2-211ENST00000561217 USP38Q8NB14 1042 aa12.59□□□□□ -0.39
TNFAIP2-211ENST00000561217 SYMPKQ92797 1274 aaKnown RBP12.59□□□□□ -0.39
TNFAIP2-211ENST00000561217 FERMT2Q96AC1 680 aa12.59□□□□□ -0.39
TNFAIP2-211ENST00000561217 EHD4Q9H223 541 aa12.59□□□□□ -0.39
TNFAIP2-211ENST00000561217 SERPINB13Q9UIV8 391 aa12.59□□□□□ -0.39
TNFAIP2-211ENST00000561217 FPGT-TNNI3KV9GXZ4 949 aa12.59□□□□□ -0.39
TNFAIP2-211ENST00000561217 COBLO75128 1261 aa12.58□□□□□ -0.4
TNFAIP2-211ENST00000561217 CYP7A1P22680 504 aa12.58□□□□□ -0.4
TNFAIP2-211ENST00000561217 GUCY1A2P33402 732 aa12.58□□□□□ -0.4
TNFAIP2-211ENST00000561217 EPHB4P54760 987 aa12.58□□□□□ -0.4
TNFAIP2-211ENST00000561217 CERKLQ49MI3 558 aaPredicted RBP12.58□□□□□ -0.4
TNFAIP2-211ENST00000561217 CCDC158Q5M9N0 1113 aa12.58□□□□□ -0.4
TNFAIP2-211ENST00000561217 PRAMEF19Q5SWL8 479 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms